BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= heS00610 (602 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 09_06_0302 - 22144271-22144543,22144946-22145083,22146004-221462... 32 0.30 06_03_0105 + 16693771-16693780,16693833-16693876,16694274-166943... 30 1.6 07_01_0866 - 7195305-7195756,7197171-7197447 29 3.7 05_03_0372 + 13181649-13182321,13183149-13183213 29 3.7 06_03_1056 + 27239176-27242361 28 5.0 02_05_0074 - 25608689-25609138 28 5.0 02_03_0390 + 18448671-18448889,18449567-18449632,18449702-184497... 28 6.5 01_07_0163 + 41578264-41578469,41578537-41579422 27 8.7 >09_06_0302 - 22144271-22144543,22144946-22145083,22146004-22146278, 22146486-22146957 Length = 385 Score = 32.3 bits (70), Expect = 0.30 Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 1/97 (1%) Frame = +1 Query: 307 ESKYPTGSPSCL-WTTATLPVTSETTASKLLPSARGRSLSGALQPSPGLSTRPKLVVAYG 483 E P+G+ + L + PV+ T S S RG G +P + LVV YG Sbjct: 260 ECLVPSGNETALKLAVLSQPVSVVITISDEFRSYRGGVFRGPCGSNPNVDNHVVLVVGYG 319 Query: 484 YSENSDDIQISSVTWQKRLILWNRVRTARRLEDPDGI 594 + ++ I +W K + +R R + + +GI Sbjct: 320 VTTDNIKYWIIKNSWGKTWGEYGYIRMERDILNKNGI 356 >06_03_0105 + 16693771-16693780,16693833-16693876,16694274-16694348, 16694548-16694784,16694880-16695050,16695137-16695250 Length = 216 Score = 29.9 bits (64), Expect = 1.6 Identities = 9/18 (50%), Positives = 12/18 (66%) Frame = -3 Query: 366 NWKCRCRPQTRRGSCWVF 313 N+ CRCRP+ RR W + Sbjct: 5 NYVCRCRPENRRNKGWAY 22 >07_01_0866 - 7195305-7195756,7197171-7197447 Length = 242 Score = 28.7 bits (61), Expect = 3.7 Identities = 25/88 (28%), Positives = 39/88 (44%) Frame = +1 Query: 274 SLRSSVRATTRESKYPTGSPSCLWTTATLPVTSETTASKLLPSARGRSLSGALQPSPGLS 453 S R++ A R + P P TA L + + LLP + A P + Sbjct: 41 SARAASTAWNRCMRRPCRCPQS--ATALLHLLA-VALLHLLPHQGEEAPLAAAAADPAPA 97 Query: 454 TRPKLVVAYGYSENSDDIQISSVTWQKR 537 TR ++V+ GY + DD+ + VT+ KR Sbjct: 98 TRREVVLCIGYDD--DDLALVDVTYPKR 123 >05_03_0372 + 13181649-13182321,13183149-13183213 Length = 245 Score = 28.7 bits (61), Expect = 3.7 Identities = 17/42 (40%), Positives = 26/42 (61%) Frame = +3 Query: 369 IRDDSVKTVTISTGPITKRCAAAVARIVNASEARRCLRIF*K 494 +R D++ IS PI K+C +A+ ++ N S A CL+IF K Sbjct: 128 LRMDALNRPGIS--PI-KKCTSAIRQLGNGSPAVECLKIFVK 166 >06_03_1056 + 27239176-27242361 Length = 1061 Score = 28.3 bits (60), Expect = 5.0 Identities = 12/25 (48%), Positives = 14/25 (56%) Frame = -3 Query: 204 VIDMVYQPSVDRDLHEVVHTEVGYW 130 V D + S+DR LH HTE G W Sbjct: 814 VFDFMPNYSLDRWLHRAKHTETGKW 838 >02_05_0074 - 25608689-25609138 Length = 149 Score = 28.3 bits (60), Expect = 5.0 Identities = 15/33 (45%), Positives = 19/33 (57%) Frame = +1 Query: 346 TTATLPVTSETTASKLLPSARGRSLSGALQPSP 444 TTA L S +T+S LLPSA + + L P P Sbjct: 4 TTAALAPPSTSTSSVLLPSAAAAAAARCLGPLP 36 >02_03_0390 + 18448671-18448889,18449567-18449632,18449702-18449761, 18449864-18449959,18452287-18452447,18452669-18452790, 18452872-18453239,18453653-18453739,18453835-18453969, 18454349-18454471,18454771-18454854,18455023-18455187, 18455310-18455486,18455660-18455773,18455912-18456016, 18457056-18457174,18457244-18457385,18457461-18457555, 18457757-18457862,18458125-18458204,18458285-18458461, 18459828-18459912,18460024-18460104,18460208-18460351, 18460468-18460563,18460654-18460854,18461462-18461895, 18462417-18462478,18462622-18462872,18462956-18463030, 18463110-18463300,18463696-18463867,18463956-18464020, 18464646-18464778,18464861-18464962,18465047-18465130, 18465656-18465730,18465818-18465877,18465967-18466223, 18466560-18466608,18466781-18466941,18467013-18467079, 18467174-18467299,18467422-18467592,18468566-18468769, 18469059-18469165,18469608-18469737,18469774-18469959, 18470704-18470742 Length = 2202 Score = 27.9 bits (59), Expect = 6.5 Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 1/26 (3%) Frame = -3 Query: 351 CRPQTRRGSCWVFAFPRCG-PY*RAQ 277 CR T +G W A P+CG PY R Q Sbjct: 2096 CRDSTLQGQEWRCAVPQCGQPYHREQ 2121 >01_07_0163 + 41578264-41578469,41578537-41579422 Length = 363 Score = 27.5 bits (58), Expect = 8.7 Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%) Frame = +1 Query: 325 GSPSCLWTTA--TLPVTSETTASKLLPSARGRSLSGALQPSPGLSTRPKLVVAYGYSENS 498 GSP +W A ++P +S S L R + +L PSP + LV+ + ++ Sbjct: 175 GSPLNMWPLAASSIPSSSSLVGSVLTYGNRSFASMFSLLPSPAVYGDTPLVITRAKNYSA 234 Query: 499 DDI 507 DD+ Sbjct: 235 DDM 237 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.317 0.132 0.404 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 16,862,037 Number of Sequences: 37544 Number of extensions: 355939 Number of successful extensions: 883 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 865 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 883 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1431112012 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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