Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00609
         (566 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089523-1|AAL90261.1|  143|Drosophila melanogaster GM14585p pro...   140   1e-33
AE013599-1845|AAF58277.2|  143|Drosophila melanogaster CG8415-PA...   140   1e-33
M19494-1|AAA28935.1|  140|Drosophila melanogaster protein ( D.me...    41   0.001
BT015958-1|AAV36843.1|  140|Drosophila melanogaster RH56553p pro...    41   0.001
AL133505-2|CAB65841.1|  140|Drosophila melanogaster EG:BACH59J11...    41   0.001
AL133505-1|CAB63528.1|  154|Drosophila melanogaster EG:BACH59J11...    41   0.001
AE014298-399|AAF45781.1|  140|Drosophila melanogaster CG7925-PB ...    41   0.001
AJ250320-1|CAB65721.1|  140|Drosophila melanogaster technical kn...    40   0.003
BT016082-1|AAV36967.1|  568|Drosophila melanogaster LD47465p pro...    29   5.8  
AY070520-1|AAL47991.1|  507|Drosophila melanogaster GH23534p pro...    29   5.8  
AE014297-2300|AAX52959.1|  568|Drosophila melanogaster CG5201-PC...    29   5.8  
AE014297-2299|AAF55383.1|  568|Drosophila melanogaster CG5201-PB...    29   5.8  
AE014297-2298|AAN13728.1|  568|Drosophila melanogaster CG5201-PA...    29   5.8  
AB004232-1|BAA22841.1|  568|Drosophila melanogaster DAD polypept...    29   5.8  
AE014297-650|AAF54148.1|  358|Drosophila melanogaster CG18268-PA...    28   7.7  

>AY089523-1|AAL90261.1|  143|Drosophila melanogaster GM14585p
           protein.
          Length = 143

 Score =  140 bits (339), Expect = 1e-33
 Identities = 61/68 (89%), Positives = 67/68 (98%)
 Frame = +3

Query: 60  HVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRV 239
           HVNHRR+QRWADK++KKAH+GT+WKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRV
Sbjct: 13  HVNHRRDQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRV 72

Query: 240 QLIKNERK 263
           QLIKN +K
Sbjct: 73  QLIKNGKK 80



 Score = 89.0 bits (211), Expect = 4e-18
 Identities = 42/42 (100%), Positives = 42/42 (100%)
 Frame = +1

Query: 325 VAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 450
           VAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS
Sbjct: 102 VAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 143



 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 18/21 (85%), Positives = 20/21 (95%)
 Frame = +2

Query: 257 KKVTAFVPRDGCLNHIEENDE 319
           KK+TAFVPRDG LN+IEENDE
Sbjct: 79  KKITAFVPRDGSLNYIEENDE 99


>AE013599-1845|AAF58277.2|  143|Drosophila melanogaster CG8415-PA
           protein.
          Length = 143

 Score =  140 bits (339), Expect = 1e-33
 Identities = 61/68 (89%), Positives = 67/68 (98%)
 Frame = +3

Query: 60  HVNHRREQRWADKEFKKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRV 239
           HVNHRR+QRWADK++KKAH+GT+WKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRV
Sbjct: 13  HVNHRRDQRWADKDYKKAHLGTRWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRV 72

Query: 240 QLIKNERK 263
           QLIKN +K
Sbjct: 73  QLIKNGKK 80



 Score = 89.0 bits (211), Expect = 4e-18
 Identities = 42/42 (100%), Positives = 42/42 (100%)
 Frame = +1

Query: 325 VAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 450
           VAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS
Sbjct: 102 VAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPRS 143



 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 18/21 (85%), Positives = 20/21 (95%)
 Frame = +2

Query: 257 KKVTAFVPRDGCLNHIEENDE 319
           KK+TAFVPRDG LN+IEENDE
Sbjct: 79  KKITAFVPRDGSLNYIEENDE 99


>M19494-1|AAA28935.1|  140|Drosophila melanogaster protein (
           D.melanogaster tko (technical knockout) locus mRNA
           encoding tko gene product,complete cds. ).
          Length = 140

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 20/44 (45%), Positives = 28/44 (63%)
 Frame = +3

Query: 114 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL 245
           H+ T+    P  G   AKG+VL+ +  + K+PNSA RKCV V+L
Sbjct: 42  HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL 85


>BT015958-1|AAV36843.1|  140|Drosophila melanogaster RH56553p
           protein.
          Length = 140

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 20/44 (45%), Positives = 28/44 (63%)
 Frame = +3

Query: 114 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL 245
           H+ T+    P  G   AKG+VL+ +  + K+PNSA RKCV V+L
Sbjct: 42  HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL 85


>AL133505-2|CAB65841.1|  140|Drosophila melanogaster
           EG:BACH59J11.1,FBgn0003714;tko protein.
          Length = 140

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 20/44 (45%), Positives = 28/44 (63%)
 Frame = +3

Query: 114 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL 245
           H+ T+    P  G   AKG+VL+ +  + K+PNSA RKCV V+L
Sbjct: 42  HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL 85


>AL133505-1|CAB63528.1|  154|Drosophila melanogaster
           EG:BACH59J11.1,FBgn0003714;tko protein.
          Length = 154

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 20/44 (45%), Positives = 28/44 (63%)
 Frame = +3

Query: 114 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL 245
           H+ T+    P  G   AKG+VL+ +  + K+PNSA RKCV V+L
Sbjct: 56  HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL 99


>AE014298-399|AAF45781.1|  140|Drosophila melanogaster CG7925-PB
           protein.
          Length = 140

 Score = 41.1 bits (92), Expect = 0.001
 Identities = 20/44 (45%), Positives = 28/44 (63%)
 Frame = +3

Query: 114 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQL 245
           H+ T+    P  G   AKG+VL+ +  + K+PNSA RKCV V+L
Sbjct: 42  HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL 85


>AJ250320-1|CAB65721.1|  140|Drosophila melanogaster technical
           knockout protein protein.
          Length = 140

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 19/43 (44%), Positives = 27/43 (62%)
 Frame = +3

Query: 114 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQ 242
           H+ T+    P  G   AKG+VL+ +  + K+PNSA RKCV V+
Sbjct: 42  HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVR 84


>BT016082-1|AAV36967.1|  568|Drosophila melanogaster LD47465p
           protein.
          Length = 568

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = -3

Query: 465 HNVHL*SWSLLFLFVESEERHVGYFYHLKTNSGNV-TDGV 349
           HN++   W  +  + E   R VG F+H KTN+ N+ TDG+
Sbjct: 393 HNINSQVWCQI-AYWEMAHR-VGEFFHAKTNAVNIYTDGI 430


>AY070520-1|AAL47991.1|  507|Drosophila melanogaster GH23534p
           protein.
          Length = 507

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = -3

Query: 465 HNVHL*SWSLLFLFVESEERHVGYFYHLKTNSGNV-TDGV 349
           HN++   W  +  + E   R VG F+H KTN+ N+ TDG+
Sbjct: 332 HNINSQVWCQI-AYWEMAHR-VGEFFHAKTNAVNIYTDGI 369


>AE014297-2300|AAX52959.1|  568|Drosophila melanogaster CG5201-PC,
           isoform C protein.
          Length = 568

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = -3

Query: 465 HNVHL*SWSLLFLFVESEERHVGYFYHLKTNSGNV-TDGV 349
           HN++   W  +  + E   R VG F+H KTN+ N+ TDG+
Sbjct: 393 HNINSQVWCQI-AYWEMAHR-VGEFFHAKTNAVNIYTDGI 430


>AE014297-2299|AAF55383.1|  568|Drosophila melanogaster CG5201-PB,
           isoform B protein.
          Length = 568

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = -3

Query: 465 HNVHL*SWSLLFLFVESEERHVGYFYHLKTNSGNV-TDGV 349
           HN++   W  +  + E   R VG F+H KTN+ N+ TDG+
Sbjct: 393 HNINSQVWCQI-AYWEMAHR-VGEFFHAKTNAVNIYTDGI 430


>AE014297-2298|AAN13728.1|  568|Drosophila melanogaster CG5201-PA,
           isoform A protein.
          Length = 568

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = -3

Query: 465 HNVHL*SWSLLFLFVESEERHVGYFYHLKTNSGNV-TDGV 349
           HN++   W  +  + E   R VG F+H KTN+ N+ TDG+
Sbjct: 393 HNINSQVWCQI-AYWEMAHR-VGEFFHAKTNAVNIYTDGI 430


>AB004232-1|BAA22841.1|  568|Drosophila melanogaster DAD polypeptide
           protein.
          Length = 568

 Score = 28.7 bits (61), Expect = 5.8
 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
 Frame = -3

Query: 465 HNVHL*SWSLLFLFVESEERHVGYFYHLKTNSGNV-TDGV 349
           HN++   W  +  + E   R VG F+H KTN+ N+ TDG+
Sbjct: 393 HNINSQVWCQI-AYWEMAHR-VGEFFHAKTNAVNIYTDGI 430


>AE014297-650|AAF54148.1|  358|Drosophila melanogaster CG18268-PA
           protein.
          Length = 358

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = +3

Query: 141 PFGGASHAKGIVLEKVGVEAK--QPNSAIRKCVRVQLIK 251
           PFG   +   +VLE+ G   K  Q    IRKCV +  +K
Sbjct: 123 PFGNVEYVLKVVLERRGTHNKCFQQRLVIRKCVELADLK 161


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,661,884
Number of Sequences: 53049
Number of extensions: 586294
Number of successful extensions: 1573
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1573
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2213979693
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)