Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00608
         (678 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          25   2.9  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    25   2.9  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    25   2.9  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   8.9  

>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 22/94 (23%), Positives = 35/94 (37%)
 Frame = +2

Query: 242 RSYNGTNSLRSSVRATTRESKYPTGSPSCLWTTATLPVTSETTASKLLPSARGRSLSGAL 421
           RS    +  RS  R +   S+ P  +   +    T      T  +    +  GR    A+
Sbjct: 439 RSRTSQSRSRSKTRTSRSRSRTPLPARGHVRARLTRRTIPPTRVAAAAAAPEGRRRRRAI 498

Query: 422 QTSPGLSTRPKARRCLRIF*KF*RHSKSRRELAK 523
             +     RP+ARR      +  RH  +RR+  K
Sbjct: 499 ARARRRRCRPRARRNPPATTRPVRHRPTRRKSTK 532


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
 Frame = +2

Query: 251  NGTNSLRSSVRATTRESKYPTGSPSCLWTTATLPVTSETTASKLLP--SARGRSLSGA 418
            +GT S   S+  + R      G+ + + TTAT  VT+ TTA  ++   SA G +  GA
Sbjct: 1480 DGTRSSNHSIDNSQRAGSDCMGTITSISTTATTTVTA-TTAEGVVTGMSAAGSAWLGA 1536


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
 Frame = +2

Query: 251  NGTNSLRSSVRATTRESKYPTGSPSCLWTTATLPVTSETTASKLLP--SARGRSLSGA 418
            +GT S   S+  + R      G+ + + TTAT  VT+ TTA  ++   SA G +  GA
Sbjct: 1477 DGTRSSNHSIDNSQRAGSDCMGTITSISTTATTTVTA-TTAEGVVTGMSAAGSAWLGA 1533


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 10/36 (27%), Positives = 17/36 (47%)
 Frame = +1

Query: 568 KTQTAFSTKMVFADATSINNHLYNLVTGGDYINAVK 675
           +T   F+   V  +   INN     +T G+ + A+K
Sbjct: 419 QTDDTFTCTRVIPEDCEINNGCMEEITSGEILYAIK 454


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 679,930
Number of Sequences: 2352
Number of extensions: 14263
Number of successful extensions: 28
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)