Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00607X
         (390 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    22   2.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   2.5  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   3.3  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        21   5.7  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    20   7.5  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    20   7.5  

>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -3

Query: 124 LSAPRWVVAASILVTSSSLRASTSNPPDIV 35
           L  P+W  A   L  SSS + S    P IV
Sbjct: 76  LGHPQWPFAWGSLXRSSSPQTSAPTGPPIV 105


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = +1

Query: 82  SPKCLLQPPILGQTMLTSRWRPMSTNDVLMVPMC 183
           SP+ + + P+  + +  SR     ++D L+ P C
Sbjct: 65  SPRSISEDPLNCRDLPNSRCNSRESSDSLVQPRC 98



 Score = 21.4 bits (43), Expect = 3.3
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -2

Query: 236 YDSTSSQNKFFPG 198
           +DS S QN  FPG
Sbjct: 740 FDSRSRQNSSFPG 752


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 3.3
 Identities = 8/21 (38%), Positives = 9/21 (42%)
 Frame = +2

Query: 80  CHQNACCNHPSWGRQC*LPDG 142
           CH N  C     G +C  P G
Sbjct: 269 CHNNGTCLDKVGGFECKCPPG 289


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 20.6 bits (41), Expect = 5.7
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1

Query: 124 MLTSRWRPMSTNDVLMVPMCST 189
           ML   W P + ND+  V +  T
Sbjct: 452 MLNMNWNPSAQNDLSGVNLSET 473


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 205 SQVRRKLSTWVPSARRL*T 149
           S+ R  + TWVP++  L T
Sbjct: 452 SKARYVIQTWVPASDNLPT 470


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = +3

Query: 96  AATTHLGADNVNFQMETYVYKRRADGTH 179
           AAT HLG+       E++ +   +  TH
Sbjct: 148 AATHHLGSVYSRHPYESWPFNTMSGATH 175


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,900
Number of Sequences: 336
Number of extensions: 2227
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8225022
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)