Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00607X
         (390 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37983-1|CAA86061.1|  276|Caenorhabditis elegans Hypothetical pr...   101   2e-22
Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical pr...    29   1.5  
Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical pr...    29   1.5  
U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical pr...    29   1.5  
U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical pr...    29   1.5  
U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical pr...    29   1.5  
U88173-9|AAK21384.3|  320|Caenorhabditis elegans Hypothetical pr...    27   4.7  
AL110482-8|CAE17990.1|  193|Caenorhabditis elegans Hypothetical ...    27   4.7  
Z98877-12|CAB63409.1|  528|Caenorhabditis elegans Hypothetical p...    27   6.2  
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p...    26   8.2  
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ...    26   8.2  
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha...    26   8.2  

>Z37983-1|CAA86061.1|  276|Caenorhabditis elegans Hypothetical
           protein B0393.1 protein.
          Length = 276

 Score =  101 bits (241), Expect = 2e-22
 Identities = 44/72 (61%), Positives = 58/72 (80%)
 Frame = +3

Query: 39  MSGGLDVLALNEEDVTKMLAATTHLGADNVNFQMETYVYKRRADGTHVLNLRRTWEKLVL 218
           MSGG    AL EEDV K+LA   HLG+ N+NFQM+ YVYKRR DG +++N+++TWEKL+L
Sbjct: 1   MSGGAAHSALTEEDVMKLLATQAHLGSTNLNFQMQQYVYKRRFDGPNIINVKKTWEKLLL 60

Query: 219 AARAVVAIKNPA 254
           AARA+ A++NPA
Sbjct: 61  AARAIAAVENPA 72



 Score = 61.3 bits (142), Expect = 2e-10
 Identities = 28/49 (57%), Positives = 34/49 (69%)
 Frame = +2

Query: 242 QEPRYVFVSSSRPFGQRAVLXFAAHTGAMPIAGRFTPGAFTNQIPAAFR 388
           + P  V V S+RP+ QRA+L FAAHTGA  I GRF+PG  TNQI   F+
Sbjct: 69  ENPADVVVVSARPYAQRALLKFAAHTGATAIFGRFSPGCLTNQIQKTFK 117


>Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical
           protein R13H4.8 protein.
          Length = 212

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
 Frame = +1

Query: 256 CVRQLITALRSACCTXVCRAHR-CYAYCG 339
           C R+  T  R+ CCT  C   R C   CG
Sbjct: 96  CCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124


>Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical
           protein T01B7.8 protein.
          Length = 164

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
 Frame = +1

Query: 256 CVRQLITALRSACCTXVCRAHR-CYAYCG 339
           C R+  T  R+ CCT  C   R C   CG
Sbjct: 94  CCRRCCTCCRTCCCTRCCTCCRPCCCGCG 122


>U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical
           protein C27A2.5 protein.
          Length = 188

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
 Frame = +1

Query: 256 CVRQLITALRSACCTXVCRAHR-CYAYCG 339
           C R+  T  R+ CCT  C   R C   CG
Sbjct: 95  CCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123


>U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical
           protein C04G6.10 protein.
          Length = 166

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
 Frame = +1

Query: 256 CVRQLITALRSACCTXVCRAHR-CYAYCG 339
           C R+  T  R+ CCT  C   R C   CG
Sbjct: 95  CCRRCCTCCRTCCCTRCCTCCRPCCCGCG 123


>U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical
           protein C04G6.7 protein.
          Length = 197

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 1/29 (3%)
 Frame = +1

Query: 256 CVRQLITALRSACCTXVCRAHR-CYAYCG 339
           C R+  T  R+ CCT  C   R C   CG
Sbjct: 96  CCRRCCTCCRTCCCTRCCTCCRPCCCGCG 124


>U88173-9|AAK21384.3|  320|Caenorhabditis elegans Hypothetical
           protein F46F11.7 protein.
          Length = 320

 Score = 27.1 bits (57), Expect = 4.7
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +2

Query: 146 LCLQTTC*WYPCAQLASYLGKTCSGCSCCR 235
           +C+   C    CA+    LG++C G +C R
Sbjct: 258 VCIDGRCRRNDCARKVCQLGESCEGGNCAR 287


>AL110482-8|CAE17990.1|  193|Caenorhabditis elegans Hypothetical
           protein Y39G8B.10 protein.
          Length = 193

 Score = 27.1 bits (57), Expect = 4.7
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +2

Query: 170 WYPCAQLASYLGKTCSGCS 226
           WY C+    Y  KTC  CS
Sbjct: 156 WYKCSDRIKYCPKTCGYCS 174


>Z98877-12|CAB63409.1|  528|Caenorhabditis elegans Hypothetical
           protein Y69H2.12 protein.
          Length = 528

 Score = 26.6 bits (56), Expect = 6.2
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +2

Query: 140 GDLCLQTTC*WYPCAQLASYLGKTCSGCSCC 232
           G  C +T+   Y C+ L+ Y G  C   + C
Sbjct: 409 GGTCTETSSGGYTCSCLSQYFGTNCEEINRC 439


>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
           protein T22A3.8 protein.
          Length = 3102

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 9/58 (15%)
 Frame = +2

Query: 161 TC*WYPCAQLASYLGKTCSGCSC-CRSHQEPRY--------VFVSSSRPFGQRAVLXF 307
           TC   PC +  S    TC G SC C+++ E  Y        + +S+S P G +    F
Sbjct: 474 TCEPCPCNRAGSVNFDTCDGASCQCKANVEGIYCDRCKAGTIHLSASNPLGCQPCFCF 531


>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
           protein T22A3.8 protein.
          Length = 3102

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 9/58 (15%)
 Frame = +2

Query: 161 TC*WYPCAQLASYLGKTCSGCSC-CRSHQEPRY--------VFVSSSRPFGQRAVLXF 307
           TC   PC +  S    TC G SC C+++ E  Y        + +S+S P G +    F
Sbjct: 474 TCEPCPCNRAGSVNFDTCDGASCQCKANVEGIYCDRCKAGTIHLSASNPLGCQPCFCF 531


>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
           chain protein.
          Length = 3102

 Score = 26.2 bits (55), Expect = 8.2
 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 9/58 (15%)
 Frame = +2

Query: 161 TC*WYPCAQLASYLGKTCSGCSC-CRSHQEPRY--------VFVSSSRPFGQRAVLXF 307
           TC   PC +  S    TC G SC C+++ E  Y        + +S+S P G +    F
Sbjct: 474 TCEPCPCNRAGSVNFDTCDGASCQCKANVEGIYCDRCKAGTIHLSASNPLGCQPCFCF 531


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,718,963
Number of Sequences: 27780
Number of extensions: 211877
Number of successful extensions: 521
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 498
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 521
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 587646290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)