Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00604
         (633 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1 pro...    44   5e-06
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   8.1  
AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant r...    23   8.1  

>AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1
           protein protein.
          Length = 160

 Score = 43.6 bits (98), Expect = 5e-06
 Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
 Frame = +2

Query: 5   DGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA--RKMKDT 178
           +G G +   +LG  +R+L  NPT  EL   +      G   I F EFL + +  +K K+ 
Sbjct: 23  EGSGQMDAMDLGNALRALNLNPT-IELIGKMGGTQKRGEKKIKFEEFLPIFSQVKKEKEQ 81

Query: 179 DSEEEIREAFRVFDKDGNGFISAAE 253
              E+  E  +++DK+ +G +  AE
Sbjct: 82  GCFEDFLECLKLYDKNEDGTMLLAE 106



 Score = 31.9 bits (69), Expect = 0.017
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
 Frame = +1

Query: 259 HVMTNLGEKLTDEEVDEMIREA--DIDGDGQVNYEEFVTMM 375
           H +T LGE+L D E+D ++++     D DG + Y  F+  M
Sbjct: 109 HSLTALGERLDDVELDNVMKDCMDPEDDDGNIPYAPFLKKM 149



 Score = 29.5 bits (63), Expect = 0.093
 Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
 Frame = +2

Query: 2   KDGDGTITTKELGTVMRSLGQNPTEAELQDMINEV--DADGNGTIDFPEFLTMMARKM 169
           K+ DGT+   EL   + +LG+   + EL +++ +     D +G I +  FL  M   M
Sbjct: 96  KNEDGTMLLAELTHSLTALGERLDDVELDNVMKDCMDPEDDDGNIPYAPFLKKMMDNM 153


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +2

Query: 404  CVKSREFKYTFCFMTHNISIVLDLHFSS 487
            C +     Y F   T NIS + + H+SS
Sbjct: 3093 CYEQHGLSYVFPHNTSNISGITEDHYSS 3120


>AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant
           receptor Or1 protein.
          Length = 417

 Score = 23.0 bits (47), Expect = 8.1
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 157 HHCQELGKVYRAVSVRVYFIDHVLKFG 77
           HH +  G +Y  V+  V F   +L FG
Sbjct: 253 HHSKVYGTMYAKVTECVLFHKDILSFG 279


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 484,973
Number of Sequences: 2352
Number of extensions: 7989
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61886940
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)