Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00603X
         (449 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8N5M1 Cluster: ATP synthase mitochondrial F1 complex a...    49   5e-05
UniRef50_Q8T3M6 Cluster: GM08665p; n=2; Drosophila melanogaster|...    45   9e-04
UniRef50_Q29KM5 Cluster: GA21252-PA; n=5; Endopterygota|Rep: GA2...    43   0.004
UniRef50_A7SDZ9 Cluster: Predicted protein; n=1; Nematostella ve...    37   0.23 
UniRef50_Q9U2U3 Cluster: Putative uncharacterized protein; n=2; ...    36   0.31 
UniRef50_Q23WM7 Cluster: Putative uncharacterized protein; n=1; ...    35   0.71 
UniRef50_Q7NCX8 Cluster: Glr2848 protein; n=1; Gloeobacter viola...    33   3.8  
UniRef50_Q8IHQ0 Cluster: Putative uncharacterized protein; n=4; ...    32   6.6  

>UniRef50_Q8N5M1 Cluster: ATP synthase mitochondrial F1 complex
           assembly factor 2, mitochondrial precursor; n=23;
           Euteleostomi|Rep: ATP synthase mitochondrial F1 complex
           assembly factor 2, mitochondrial precursor - Homo
           sapiens (Human)
          Length = 289

 Score = 48.8 bits (111), Expect = 5e-05
 Identities = 20/37 (54%), Positives = 25/37 (67%)
 Frame = +2

Query: 335 NEPLTRTIAVAWDSQNETMAQATMHLTALCNTARDNP 445
           +E L   +A  WDSQ +T+   TMHLT LCNT+ DNP
Sbjct: 83  SEALAIAVATEWDSQQDTIKYYTMHLTTLCNTSLDNP 119


>UniRef50_Q8T3M6 Cluster: GM08665p; n=2; Drosophila
           melanogaster|Rep: GM08665p - Drosophila melanogaster
           (Fruit fly)
          Length = 279

 Score = 44.8 bits (101), Expect = 9e-04
 Identities = 19/38 (50%), Positives = 27/38 (71%)
 Frame = +2

Query: 332 RNEPLTRTIAVAWDSQNETMAQATMHLTALCNTARDNP 445
           R+EPL   +A  +D+Q E + ++ MHL+ALC TA DNP
Sbjct: 73  RSEPLAIAVATEFDAQKENIERSRMHLSALCFTAIDNP 110


>UniRef50_Q29KM5 Cluster: GA21252-PA; n=5; Endopterygota|Rep:
           GA21252-PA - Drosophila pseudoobscura (Fruit fly)
          Length = 278

 Score = 42.7 bits (96), Expect = 0.004
 Identities = 18/38 (47%), Positives = 27/38 (71%)
 Frame = +2

Query: 332 RNEPLTRTIAVAWDSQNETMAQATMHLTALCNTARDNP 445
           ++EPL   +A  +DSQ + + ++ MHL+ALC TA DNP
Sbjct: 72  KSEPLAIAVATEFDSQRDHIERSRMHLSALCFTAIDNP 109


>UniRef50_A7SDZ9 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 237

 Score = 36.7 bits (81), Expect = 0.23
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +2

Query: 335 NEPLTRTIAVAWDSQNETMAQATMHLTALCNTARDNP 445
           N+ L   +A  W+ Q  T+  A+MHLT+L NT  D P
Sbjct: 39  NQKLAVAMASEWNMQTGTIKPASMHLTSLANTVIDKP 75


>UniRef50_Q9U2U3 Cluster: Putative uncharacterized protein; n=2;
           Caenorhabditis|Rep: Putative uncharacterized protein -
           Caenorhabditis elegans
          Length = 269

 Score = 36.3 bits (80), Expect = 0.31
 Identities = 17/35 (48%), Positives = 20/35 (57%)
 Frame = +2

Query: 341 PLTRTIAVAWDSQNETMAQATMHLTALCNTARDNP 445
           PL   IA  W SQ+E +    M LT L  TA+DNP
Sbjct: 68  PLALAIAEEWSSQDEFLQLGQMRLTGLAFTAQDNP 102


>UniRef50_Q23WM7 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 465

 Score = 35.1 bits (77), Expect = 0.71
 Identities = 20/66 (30%), Positives = 32/66 (48%)
 Frame = +3

Query: 12  IFGFIQHTFTLEIENNCIFNLMNTCTYERYIKLQL*LETHYNNENIYSGFWYFNFTVNTM 191
           +F   Q  FTL+I   CI NLM +  Y + +  ++ L   Y N+ I +   +F    N +
Sbjct: 255 LFENFQSDFTLQISQICIQNLMESLFYHKDLNQEVKLSLSYQNQKILNLNLFFLGISNHL 314

Query: 192 YPMQYI 209
           +  Q I
Sbjct: 315 FEDQQI 320


>UniRef50_Q7NCX8 Cluster: Glr2848 protein; n=1; Gloeobacter
           violaceus|Rep: Glr2848 protein - Gloeobacter violaceus
          Length = 1335

 Score = 32.7 bits (71), Expect = 3.8
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = +2

Query: 245 GQLSSECQQMGSDFGSSTSKNTKWECINRRNEPLTRTIAVAWDSQNETM 391
           G+  + C   GS+ GS  +    WE I +    L   IA  W+S N+ +
Sbjct: 746 GKAMAVCSDPGSERGSMLAVGGDWEQIQQEIADLPEVIAANWNSSNQVV 794


>UniRef50_Q8IHQ0 Cluster: Putative uncharacterized protein; n=4;
            Eukaryota|Rep: Putative uncharacterized protein -
            Plasmodium falciparum (isolate 3D7)
          Length = 3207

 Score = 31.9 bits (69), Expect = 6.6
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = +3

Query: 54   NNCIFNLMNTCTYERYIKLQL*LETHYNNENIYSGFWYFNFTVNTMYPMQY 206
            NN I+N  N   Y+  I        +YNN N+Y+ ++ +N   N MY   Y
Sbjct: 2143 NNIIYNNNNNQIYDNNINNMYNDYYNYNNNNMYNNYYNYN-NNNNMYNNYY 2192


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 466,154,745
Number of Sequences: 1657284
Number of extensions: 9231333
Number of successful extensions: 18522
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 18091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18519
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 23604537544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)