Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00603X
         (449 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   0.57 
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   1.0  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   5.4  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    20   9.4  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 0.57
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = -2

Query: 235 IFYV*HMDDIYCIGYIVFTVKLKY 164
           I+Y  +M  ++C  +I+FT+ L +
Sbjct: 258 IYYFYYMHLLFCCAFIIFTMHLLF 281


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 23.4 bits (48), Expect = 1.0
 Identities = 9/32 (28%), Positives = 13/32 (40%)
 Frame = +2

Query: 245 GQLSSECQQMGSDFGSSTSKNTKWECINRRNE 340
           G     C+      G  T  +  WEC+N + E
Sbjct: 23  GNQEDPCKLKSKVVGDETYCDRYWECVNGQQE 54


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.0 bits (42), Expect = 5.4
 Identities = 14/38 (36%), Positives = 17/38 (44%)
 Frame = +2

Query: 317 ECINRRNEPLTRTIAVAWDSQNETMAQATMHLTALCNT 430
           ECI + N  L  T  V+   Q   + Q    L ALC T
Sbjct: 230 ECIEQYNVILRYTKIVSDTYQGILVVQFFCSLVALCLT 267


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +2

Query: 314 WECINRRNE 340
           W+CIN+R E
Sbjct: 58  WQCINQRCE 66


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,905
Number of Sequences: 336
Number of extensions: 2688
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10195961
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)