Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00603X
         (449 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g67520.1 68414.m07692 lectin protein kinase family protein co...    27   4.4  
At3g55940.1 68416.m06216 phosphoinositide-specific phospholipase...    27   7.7  
At2g41540.2 68415.m05134 NAD-dependent glycerol-3-phosphate dehy...    27   7.7  
At2g41540.1 68415.m05133 NAD-dependent glycerol-3-phosphate dehy...    27   7.7  

>At1g67520.1 68414.m07692 lectin protein kinase family protein
           contains Pfam domains PF00069: Protein kinase domain and
           PF01453: Lectin (probable mannose binding)
          Length = 587

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = +3

Query: 135 NNENIYSGFWYFNFTVNT 188
           N+EN+Y G W+ N  +NT
Sbjct: 55  NSENLYLGIWFNNLYLNT 72


>At3g55940.1 68416.m06216 phosphoinositide-specific phospholipase C,
           putative similar to phosphoinositide specific
           phospholipase C GI:857374 from [Arabidopsis thaliana]
          Length = 584

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 188 DVPYAVYIVHMLHVKDFIGGQLSSECQQM 274
           D P + Y ++  H     G QLSS+C ++
Sbjct: 106 DAPLSHYFIYTGHNSYLTGNQLSSDCSEL 134


>At2g41540.2 68415.m05134 NAD-dependent glycerol-3-phosphate
           dehydrogenase family protein weak similarity to
           SP|P46919 Glycerol-3-phosphate dehydrogenase [NAD(P)+]
           (EC 1.1.1.94) {Bacillus subtilis}; contains Pfam profile
           PF01210: NAD-dependent glycerol-3-phosphate
           dehydrogenase
          Length = 462

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 14/65 (21%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +3

Query: 27  QHTF-TLEIENNCIFNLMNTCTYERYIKLQL*LETHYNNENIYSGFWYFNFTVNTMYPMQ 203
           +H F  +    + +  L+  C Y +Y++ +L   T Y +E +  GF   N     + P++
Sbjct: 89  EHLFEVINSREDILRRLIRRCAYLKYVEARLGDRTLYADEILKDGF-CLNMVDTPLCPLK 147

Query: 204 YISSI 218
            ++++
Sbjct: 148 VVTNL 152


>At2g41540.1 68415.m05133 NAD-dependent glycerol-3-phosphate
           dehydrogenase family protein weak similarity to
           SP|P46919 Glycerol-3-phosphate dehydrogenase [NAD(P)+]
           (EC 1.1.1.94) {Bacillus subtilis}; contains Pfam profile
           PF01210: NAD-dependent glycerol-3-phosphate
           dehydrogenase
          Length = 462

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 14/65 (21%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
 Frame = +3

Query: 27  QHTF-TLEIENNCIFNLMNTCTYERYIKLQL*LETHYNNENIYSGFWYFNFTVNTMYPMQ 203
           +H F  +    + +  L+  C Y +Y++ +L   T Y +E +  GF   N     + P++
Sbjct: 89  EHLFEVINSREDILRRLIRRCAYLKYVEARLGDRTLYADEILKDGF-CLNMVDTPLCPLK 147

Query: 204 YISSI 218
            ++++
Sbjct: 148 VVTNL 152


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,240,855
Number of Sequences: 28952
Number of extensions: 207463
Number of successful extensions: 428
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 428
length of database: 12,070,560
effective HSP length: 75
effective length of database: 9,899,160
effective search space used: 732537840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)