Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00602
(692 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10; Culicim... 164 2e-39
UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203; Eukary... 161 2e-38
UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 155 1e-36
UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, wh... 134 3e-30
UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1; ... 130 4e-29
UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5... 125 1e-27
UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila... 122 6e-27
UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2; T... 122 6e-27
UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba hi... 111 1e-23
UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lambli... 100 4e-20
UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1; Encephal... 91 3e-17
UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9; Trypanos... 88 2e-16
UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S riboso... 85 1e-15
UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillard... 85 2e-15
UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, wh... 75 1e-12
UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2; Methano... 58 2e-07
UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1; ... 57 4e-07
UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1; Thermoc... 57 5e-07
UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 56 8e-07
UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7; Euryarc... 54 3e-06
UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4; Archaea... 50 4e-05
UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6; Halobac... 50 5e-05
UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus ... 50 7e-05
UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2; Desulfu... 49 9e-05
UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyr... 48 2e-04
UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella... 48 3e-04
UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5; Sulfolo... 47 4e-04
UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum... 45 0.002
UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n... 42 0.011
UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila melanogaster|... 41 0.033
UniRef50_A7DQN0 Cluster: Ribosomal protein S6e; n=1; Candidatus ... 41 0.033
UniRef50_Q978W7 Cluster: 30S ribosomal protein S6e; n=5; Thermop... 41 0.033
UniRef50_Q8PU79 Cluster: 30S ribosomal protein S6e; n=8; Euryarc... 41 0.033
UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo sapiens... 38 0.31
UniRef50_Q8ZX25 Cluster: 30S ribosomal protein S6e; n=5; Thermop... 38 0.31
UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1; Nanoarc... 36 0.94
UniRef50_Q87BM0 Cluster: Putative uncharacterized protein; n=1; ... 35 1.6
UniRef50_A7PB79 Cluster: Chromosome chr16 scaffold_10, whole gen... 34 3.8
UniRef50_A7DL47 Cluster: Flagellar hook-associated 3 family prot... 33 5.0
UniRef50_Q6N427 Cluster: Phytoene dehydrogenase-related protein;... 33 6.6
UniRef50_Q26G27 Cluster: Cytoplasmic aminopeptidase; n=1; Flavob... 33 6.6
UniRef50_A6L045 Cluster: Putative uncharacterized protein; n=1; ... 33 8.8
UniRef50_A2F5X7 Cluster: Putative uncharacterized protein; n=1; ... 33 8.8
>UniRef50_Q9U762 Cluster: 40S ribosomal protein S6; n=10;
Culicimorpha|Rep: 40S ribosomal protein S6 - Aedes
albopictus (Forest day mosquito)
Length = 349
Score = 164 bits (399), Expect = 2e-39
Identities = 72/87 (82%), Positives = 80/87 (91%)
Frame = +2
Query: 2 FYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRP 181
FY+KRMGAE+ AD LGDEWKGYV ++AGGNDKQGFPMKQGVLTN+RVRLL+ KGHSCYRP
Sbjct: 27 FYDKRMGAEITADHLGDEWKGYVFKIAGGNDKQGFPMKQGVLTNTRVRLLLKKGHSCYRP 86
Query: 182 RRDGERKRKSVRGCIVDANLSVLALLL 262
RR GERKRKSVRGCIVD NLS LAL++
Sbjct: 87 RRTGERKRKSVRGCIVDQNLSALALIV 113
Score = 114 bits (275), Expect = 2e-24
Identities = 62/126 (49%), Positives = 76/126 (60%)
Frame = +1
Query: 247 LGSVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGK 426
L ++V+KG ++IPGLTD V RRLGPKRAS IRKL+NL+KEDDVR+YVVKR LP K+GK
Sbjct: 109 LALIVVKKGEKDIPGLTDTTVLRRLGPKRASNIRKLYNLTKEDDVRQYVVKRPLPEKDGK 168
Query: 427 ENAKPRHKAPKIQRLVTXXXXXXXXXXXXXXXXXXXXXXXXXXNMLNCLHRERRNPRCVA 606
KPR KAPKIQRL+T + LH RR R
Sbjct: 169 ---KPRTKAPKIQRLITPVVLQRKRHRLAIKKRRVESRKEAEAEYMKILHLRRRQERIRR 225
Query: 607 RTRLNA 624
R+RL++
Sbjct: 226 RSRLSS 231
>UniRef50_P62753 Cluster: 40S ribosomal protein S6; n=203;
Eukaryota|Rep: 40S ribosomal protein S6 - Homo sapiens
(Human)
Length = 249
Score = 161 bits (390), Expect = 2e-38
Identities = 72/87 (82%), Positives = 80/87 (91%)
Frame = +2
Query: 2 FYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRP 181
FYEKRM EV AD LG+EWKGYV+R++GGNDKQGFPMKQGVLT+ RVRLL+SKGHSCYRP
Sbjct: 27 FYEKRMATEVAADALGEEWKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCYRP 86
Query: 182 RRDGERKRKSVRGCIVDANLSVLALLL 262
RR GERKRKSVRGCIVDANLSVL L++
Sbjct: 87 RRTGERKRKSVRGCIVDANLSVLNLVI 113
Score = 110 bits (264), Expect = 4e-23
Identities = 58/77 (75%), Positives = 65/77 (84%)
Frame = +1
Query: 247 LGSVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGK 426
L VIV+KG ++IPGLTD VPRRLGPKRAS+IRKLFNLSKEDDVR+YVV++ L KEGK
Sbjct: 109 LNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYVVRKPL-NKEGK 167
Query: 427 ENAKPRHKAPKIQRLVT 477
KPR KAPKIQRLVT
Sbjct: 168 ---KPRTKAPKIQRLVT 181
Score = 33.1 bits (72), Expect = 6.6
Identities = 14/21 (66%), Positives = 19/21 (90%)
Frame = +3
Query: 555 EYAKLLAQRKKESKVRRQDEI 617
EYAKLLA+R KE+K +RQ++I
Sbjct: 208 EYAKLLAKRMKEAKEKRQEQI 228
>UniRef50_A7SGC3 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 245
Score = 155 bits (375), Expect = 1e-36
Identities = 67/87 (77%), Positives = 77/87 (88%)
Frame = +2
Query: 2 FYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRP 181
FY+KRM EV + LGDEWKGYV R+ GGNDKQGFPMKQG++TN RVRLL+SKGHSCYRP
Sbjct: 27 FYDKRMAMEVSGECLGDEWKGYVFRITGGNDKQGFPMKQGIMTNGRVRLLLSKGHSCYRP 86
Query: 182 RRDGERKRKSVRGCIVDANLSVLALLL 262
RR GERKRKSVRGCIVD+ LSVL+L++
Sbjct: 87 RRTGERKRKSVRGCIVDSQLSVLSLVI 113
Score = 113 bits (273), Expect = 3e-24
Identities = 55/77 (71%), Positives = 63/77 (81%)
Frame = +1
Query: 247 LGSVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGK 426
L VIV+KG Q+IPGLTD +PRRLGPKR KIRK+FNLSKEDDVR+YV++R LP KEGK
Sbjct: 109 LSLVIVKKGEQDIPGLTDNTIPRRLGPKRVGKIRKMFNLSKEDDVRQYVIRRPLPEKEGK 168
Query: 427 ENAKPRHKAPKIQRLVT 477
K + KAPKIQRLVT
Sbjct: 169 ---KAKSKAPKIQRLVT 182
>UniRef50_A0CU37 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 315
Score = 134 bits (323), Expect = 3e-30
Identities = 59/85 (69%), Positives = 71/85 (83%)
Frame = +2
Query: 2 FYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRP 181
F++KRMG VEAD LG+E+KGYVL++ GGNDKQGFPM+QGVL RVR+LM KGH YRP
Sbjct: 27 FFDKRMGQVVEADNLGEEYKGYVLKITGGNDKQGFPMRQGVLFKGRVRILMRKGHKGYRP 86
Query: 182 RRDGERKRKSVRGCIVDANLSVLAL 256
R+DGE KRKS+RGCIV ++ VLAL
Sbjct: 87 RKDGEMKRKSIRGCIVGQDIRVLAL 111
Score = 81.0 bits (191), Expect = 3e-14
Identities = 42/76 (55%), Positives = 54/76 (71%), Gaps = 3/76 (3%)
Frame = +1
Query: 259 IVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDD---VRRYVVKRVLPAKEGKE 429
+V+KGA EI GLTD NVPRRLGPKR +K+R+LF K D V++ +++R K+GK+
Sbjct: 113 VVKKGANEIAGLTDQNVPRRLGPKRLTKLRRLFGFKKADGVAIVQKNLIRRTWTTKDGKK 172
Query: 430 NAKPRHKAPKIQRLVT 477
R KAPKIQRLVT
Sbjct: 173 ----RQKAPKIQRLVT 184
>UniRef50_A4VD76 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 293
Score = 130 bits (313), Expect = 4e-29
Identities = 58/85 (68%), Positives = 69/85 (81%)
Frame = +2
Query: 2 FYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRP 181
F +K+MG EVE D LGDE+KGYV ++AGGNDK GFPMKQGV+ RVRLL+S+GHSC+
Sbjct: 27 FMDKKMGQEVEGDTLGDEFKGYVFKIAGGNDKDGFPMKQGVMVRGRVRLLLSEGHSCFTS 86
Query: 182 RRDGERKRKSVRGCIVDANLSVLAL 256
RR G RKRKSVRGCIV ++ VLAL
Sbjct: 87 RRSGFRKRKSVRGCIVGPDMRVLAL 111
Score = 75.8 bits (178), Expect = 1e-12
Identities = 39/76 (51%), Positives = 52/76 (68%), Gaps = 3/76 (3%)
Frame = +1
Query: 259 IVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDD---VRRYVVKRVLPAKEGKE 429
IV+KG EI GLT +PR+LGPKRA+ I+KLF L KEDD +++ V++R +GK+
Sbjct: 113 IVKKGVAEIDGLTTVTLPRKLGPKRANNIKKLFGLKKEDDPILIKKSVIRRTFKTAKGKD 172
Query: 430 NAKPRHKAPKIQRLVT 477
R K PKIQRL+T
Sbjct: 173 ----RTKCPKIQRLIT 184
>UniRef50_A5K858 Cluster: 40S ribosomal protein S6, putative; n=5;
Plasmodium|Rep: 40S ribosomal protein S6, putative -
Plasmodium vivax
Length = 391
Score = 125 bits (301), Expect = 1e-27
Identities = 57/87 (65%), Positives = 67/87 (77%)
Frame = +2
Query: 2 FYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRP 181
F EKR+G V D +G+E+ GYV R+ GGNDKQGFPM QGVLTN+RVRLL KG CYRP
Sbjct: 68 FMEKRIGNVVPGDSIGEEFLGYVFRITGGNDKQGFPMMQGVLTNNRVRLLFKKGMKCYRP 127
Query: 182 RRDGERKRKSVRGCIVDANLSVLALLL 262
R+ GE++RKSVRGCIV +LS L L L
Sbjct: 128 RKKGEKRRKSVRGCIVGQDLSALNLTL 154
Score = 87.4 bits (207), Expect = 3e-16
Identities = 45/77 (58%), Positives = 54/77 (70%)
Frame = +1
Query: 247 LGSVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGK 426
L +V+KG EIPGLTD V ++LGPKRA+KIRKLFNL K DDVR+YV+ R +
Sbjct: 150 LNLTLVKKGTNEIPGLTDKAVGKKLGPKRATKIRKLFNLDKTDDVRKYVIGRAI-----S 204
Query: 427 ENAKPRHKAPKIQRLVT 477
+N K R PKIQRLVT
Sbjct: 205 KNGKNRFIKPKIQRLVT 221
>UniRef50_P29327-2 Cluster: Isoform B of P29327 ; n=3; Drosophila
melanogaster|Rep: Isoform B of P29327 - Drosophila
melanogaster (Fruit fly)
Length = 200
Score = 122 bits (295), Expect = 6e-27
Identities = 60/92 (65%), Positives = 71/92 (77%)
Frame = +2
Query: 2 FYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRP 181
FYEKRMG VEAD LGDEWKGY LR+AGGNDKQGFPMKQGVLT+ R+RLL K HSC+ P
Sbjct: 27 FYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLTHGRLRLL-KKIHSCFHP 85
Query: 182 RRDGERKRKSVRGCIVDANLSVLALLLCARVP 277
R + RK K+VR V+AN+S L L++ + P
Sbjct: 86 RCNKVRKCKTVRKYTVEANVSALTLVVLKKNP 117
Score = 34.3 bits (75), Expect = 2.9
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +1
Query: 310 PRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPK 459
P RLGP R+S I K++ L +EDD V+P K + + K R A K
Sbjct: 119 PCRLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 161
>UniRef50_A2EFM7 Cluster: Ribosomal protein S6e, putative; n=2;
Trichomonas vaginalis G3|Rep: Ribosomal protein S6e,
putative - Trichomonas vaginalis G3
Length = 216
Score = 122 bits (295), Expect = 6e-27
Identities = 51/82 (62%), Positives = 67/82 (81%)
Frame = +2
Query: 5 YEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPR 184
YEKR+G ++E ++LG ++KGY+ R+ GG DKQGFPMKQGV+T R+RLL+ G SCYRPR
Sbjct: 28 YEKRVGQDIEGEKLGGQFKGYLFRIGGGFDKQGFPMKQGVITPRRIRLLLKTGASCYRPR 87
Query: 185 RDGERKRKSVRGCIVDANLSVL 250
+DGERKRK+VRGCI+ +S L
Sbjct: 88 KDGERKRKTVRGCIISDEISAL 109
Score = 56.8 bits (131), Expect = 5e-07
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 1/78 (1%)
Frame = +1
Query: 247 LGSVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLS-KEDDVRRYVVKRVLPAKEG 423
L V+++KG +EI GLT VPRR GPKRAS +R +F ++ + D + V+KR K G
Sbjct: 109 LHCVVLQKGEKEIDGLTTTAVPRRFGPKRASTLRAMFGITDSKFDASKLVLKR--EVKPG 166
Query: 424 KENAKPRHKAPKIQRLVT 477
K +PK+QRL+T
Sbjct: 167 K------FTSPKVQRLIT 178
>UniRef50_O15598 Cluster: Ribosomal protein S6; n=6; Entamoeba
histolytica|Rep: Ribosomal protein S6 - Entamoeba
histolytica
Length = 162
Score = 111 bits (268), Expect = 1e-23
Identities = 49/83 (59%), Positives = 65/83 (78%)
Frame = +2
Query: 2 FYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRP 181
F +KR+G EV+A LGDE+KGY+L++ GG DK GFPM GV TN+RVRLL+ + CY+P
Sbjct: 26 FLDKRIGQEVDASSLGDEFKGYILKITGGCDKDGFPMMTGVATNNRVRLLLDGRNGCYKP 85
Query: 182 RRDGERKRKSVRGCIVDANLSVL 250
R+GER+RK+VRG IV ++SVL
Sbjct: 86 LRNGERRRKTVRGAIVAGDISVL 108
Score = 65.7 bits (153), Expect = 1e-09
Identities = 27/52 (51%), Positives = 42/52 (80%)
Frame = +1
Query: 247 LGSVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKR 402
L +++V+KG EI G+T+ +P R GP+RAS RKLFNLS++DDV+++V++R
Sbjct: 108 LNTIVVKKGEGEIEGVTNDALPMRAGPQRASHFRKLFNLSQKDDVKKFVIRR 159
>UniRef50_Q7QSH4 Cluster: GLP_64_20707_19961; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_64_20707_19961 - Giardia lamblia
ATCC 50803
Length = 248
Score = 100 bits (239), Expect = 4e-20
Identities = 45/83 (54%), Positives = 59/83 (71%)
Frame = +2
Query: 14 RMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDG 193
RM +E + LG+E+ G R+ GGND QGFPM QGVL + R RLL+ +G CY RR+G
Sbjct: 37 RMASEFDGAALGEEYAGCTFRITGGNDAQGFPMYQGVLKSQRARLLLRQGAKCYLHRRNG 96
Query: 194 ERKRKSVRGCIVDANLSVLALLL 262
ERKRKS+RGCIV +L L+++L
Sbjct: 97 ERKRKSIRGCIVGPDLHALSVVL 119
Score = 56.4 bits (130), Expect = 6e-07
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 5/82 (6%)
Frame = +1
Query: 247 LGSVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNL--SKEDDVRRYVVKRV---LP 411
L V+V G + +PGLTD VP+RL PKRASKIR+LF L +K D + +V + L
Sbjct: 115 LSVVLVDAGDKTLPGLTDVVVPKRLVPKRASKIRRLFGLPTTKVDPKDQMLVCELIKELG 174
Query: 412 AKEGKENAKPRHKAPKIQRLVT 477
+ +N + + K PK+QR+VT
Sbjct: 175 HEVTLKNGEKKLKYPKVQRVVT 196
>UniRef50_Q8SRY0 Cluster: 40S ribosomal protein S6; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S6 -
Encephalitozoon cuniculi
Length = 203
Score = 90.6 bits (215), Expect = 3e-17
Identities = 42/86 (48%), Positives = 60/86 (69%)
Frame = +2
Query: 5 YEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPR 184
Y+K++G + + LG+E++G ++ + GG+D QGFPM G LT RVR L+SKG + YR R
Sbjct: 13 YDKKIGDQFDGGILGEEFEGTIMEITGGDDYQGFPMVSGHLTKKRVRPLLSKGDAGYRCR 72
Query: 185 RDGERKRKSVRGCIVDANLSVLALLL 262
R G R+RKSVRG IV + VL L++
Sbjct: 73 RKGVRRRKSVRGSIVSEEICVLNLII 98
Score = 35.5 bits (78), Expect = 1.2
Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = +1
Query: 247 LGSVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAK--E 420
L +I+R G +EI GLT+ P++ K+RK+F + E+ ++ +L ++ +
Sbjct: 94 LNLIILRPGEKEIDGLTNAVNDVSHLPRKEKKLRKMFGVPDEEKNVVGYIRNILKSECDD 153
Query: 421 GKENAKPRHKAPKIQR 468
K+ K RH +++R
Sbjct: 154 PKKIPKIRHNGKRMKR 169
>UniRef50_Q9NE83 Cluster: 40S ribosomal protein S6; n=9;
Trypanosomatidae|Rep: 40S ribosomal protein S6 -
Leishmania major
Length = 249
Score = 87.8 bits (208), Expect = 2e-16
Identities = 49/80 (61%), Positives = 59/80 (73%), Gaps = 1/80 (1%)
Frame = +1
Query: 241 LGLGSVIVRK-GAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAK 417
+ L +V + K G Q I G+TD PRRLGPKRASKIRKLFNLS+ +DVR+YVV+R + K
Sbjct: 109 IALVNVTISKVGDQPIEGVTDTTAPRRLGPKRASKIRKLFNLSRTEDVRKYVVRRRV-VK 167
Query: 418 EGKENAKPRHKAPKIQRLVT 477
GK K R KAPKIQRL+T
Sbjct: 168 SGK---KDRLKAPKIQRLIT 184
Score = 80.6 bits (190), Expect = 3e-14
Identities = 37/81 (45%), Positives = 57/81 (70%), Gaps = 2/81 (2%)
Frame = +2
Query: 14 RMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRR-- 187
R+G EV+ G E+KGY+ R+ GG+DK GFPM GVL +SRV LL+ +G + R
Sbjct: 32 RLGNEVDGAIFGSEFKGYIFRLRGGSDKDGFPMVPGVLASSRVSLLVKRGAIGFNTFRGY 91
Query: 188 DGERKRKSVRGCIVDANLSVL 250
GER+RK+VRGC++ ++++++
Sbjct: 92 QGERRRKNVRGCVLASDIALV 112
>UniRef50_UPI00005A146E Cluster: PREDICTED: similar to 40S ribosomal
protein S6; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S6 - Canis familiaris
Length = 154
Score = 85.4 bits (202), Expect = 1e-15
Identities = 35/51 (68%), Positives = 44/51 (86%)
Frame = +2
Query: 2 FYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLM 154
FYEK M +EV AD LG+EWKGY++R++GGNDKQGFPMKQ VLT+ R+ LL+
Sbjct: 27 FYEKHMASEVAADALGEEWKGYMVRISGGNDKQGFPMKQDVLTHDRIHLLL 77
Score = 63.3 bits (147), Expect = 5e-09
Identities = 38/71 (53%), Positives = 47/71 (66%), Gaps = 6/71 (8%)
Frame = +1
Query: 277 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDD-----VRRYVVKRVLP-AKEGKENAK 438
++IPGLTD PR +GPKRAS+IRKLFNLSKEDD + R + KR+ KE KE K
Sbjct: 80 KDIPGLTDTTEPRHVGPKRASRIRKLFNLSKEDDAAQNSILRKIRKRIYKRMKEAKE--K 137
Query: 439 PRHKAPKIQRL 471
+ + K QRL
Sbjct: 138 RQEQIAKRQRL 148
>UniRef50_Q98SA3 Cluster: 40S ribosomal protein S6; n=1; Guillardia
theta|Rep: 40S ribosomal protein S6 - Guillardia theta
(Cryptomonas phi)
Length = 209
Score = 85.0 bits (201), Expect = 2e-15
Identities = 40/88 (45%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Frame = +2
Query: 5 YEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYR-- 178
Y K++ ++++ +G EW + + GG DKQGFPMK+G+L+ SRV++L+ KG + R
Sbjct: 28 YGKKLTSKIDGKIIGKEWDKSIFIITGGQDKQGFPMKEGILSPSRVKILLKKGSTGCRGY 87
Query: 179 PRRDGERKRKSVRGCIVDANLSVLALLL 262
+ GER RKSVRGCIV +SVL + L
Sbjct: 88 KMKKGERCRKSVRGCIVSPEISVLNIKL 115
Score = 35.5 bits (78), Expect = 1.2
Identities = 23/62 (37%), Positives = 36/62 (58%)
Frame = +1
Query: 292 LTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQRL 471
+T+ N + L KR+S +RK+ L+K DD+R++ +K AK+ K KIQRL
Sbjct: 125 ITNKNSEKTLTHKRSSNLRKVLCLTKTDDIRKHYIK---IAKDFKNKV-------KIQRL 174
Query: 472 VT 477
+T
Sbjct: 175 IT 176
>UniRef50_A0DEZ7 Cluster: Chromosome undetermined scaffold_48, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_48,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 304
Score = 75.4 bits (177), Expect = 1e-12
Identities = 38/61 (62%), Positives = 43/61 (70%)
Frame = +2
Query: 74 RVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLA 253
R GGNDKQG VL RVR+LM KGH YRPR+DGE KRKS+RGCIV ++ VLA
Sbjct: 62 RFTGGNDKQG------VLFKGRVRILMRKGHKGYRPRKDGEMKRKSIRGCIVGQDIRVLA 115
Query: 254 L 256
L
Sbjct: 116 L 116
Score = 73.7 bits (173), Expect = 4e-12
Identities = 42/75 (56%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Frame = +1
Query: 259 IVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKE-GKEN- 432
+V+KGA EI GLTD NVPRRLGPKR +K+R+LF K D RV+ ++E G +
Sbjct: 118 VVKKGANEIAGLTDQNVPRRLGPKRLTKLRRLFGFKKAD--------RVISSEEHGPQRY 169
Query: 433 AKPRHKAPKIQRLVT 477
K R KAPKIQRLVT
Sbjct: 170 GKKRQKAPKIQRLVT 184
>UniRef50_Q2NGM7 Cluster: 30S ribosomal protein S6e; n=2;
Methanobacteriaceae|Rep: 30S ribosomal protein S6e -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 130
Score = 58.4 bits (135), Expect = 2e-07
Identities = 32/86 (37%), Positives = 52/86 (60%)
Frame = +2
Query: 14 RMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDG 193
++G E LG KGY LR+ GG+DK GFPMK+ V R + L++ G + ++P + G
Sbjct: 30 KIGEEFNGGVLG--LKGYKLRITGGSDKNGFPMKEDVDGTRRFKSLVN-GGTGFKPTKKG 86
Query: 194 ERKRKSVRGCIVDANLSVLALLLCAR 271
R+RK+VRG + ++S + + + R
Sbjct: 87 LRRRKTVRGNTIADDISQINVKVSER 112
>UniRef50_UPI00015BAF12 Cluster: SSU ribosomal protein S6E; n=1;
Ignicoccus hospitalis KIN4/I|Rep: SSU ribosomal protein
S6E - Ignicoccus hospitalis KIN4/I
Length = 236
Score = 57.2 bits (132), Expect = 4e-07
Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = +2
Query: 2 FYEKRMGAEVEADQLGDEW-KGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYR 178
F KR+G V A LG E KG L + GG+D+ GFPM+ + + R L+S G +
Sbjct: 147 FIGKRIGETVPASILGIETLKGLQLEIRGGSDESGFPMRPDIPGPVKKRALLS-GPPGFW 205
Query: 179 PRRDGERKRKSVRGCIVDANL 241
PR GER+RK+VRG + ++
Sbjct: 206 PREKGERRRKTVRGNTISEDI 226
>UniRef50_Q5JDK8 Cluster: 30S ribosomal protein S6e; n=1;
Thermococcus kodakarensis KOD1|Rep: 30S ribosomal
protein S6e - Pyrococcus kodakaraensis (Thermococcus
kodakaraensis)
Length = 125
Score = 56.8 bits (131), Expect = 5e-07
Identities = 33/86 (38%), Positives = 50/86 (58%), Gaps = 9/86 (10%)
Frame = +2
Query: 11 KRMGAEVEADQLG---DEWKGYV------LRVAGGNDKQGFPMKQGVLTNSRVRLLMSKG 163
+R+G E+ A +LG E G L++ GG DK GFPM+ V RV++L+S+G
Sbjct: 32 RRIGEEIPASELGLNLSEIFGEEIPADAKLKITGGTDKDGFPMRPDVHGPRRVKILLSRG 91
Query: 164 HSCYRPRRDGERKRKSVRGCIVDANL 241
+RPR GER++K+V G + N+
Sbjct: 92 PG-FRPRERGERRKKTVHGNTISPNI 116
>UniRef50_Q8U3H8 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Pyrococcus
furiosus
Length = 125
Score = 56.0 bits (129), Expect = 8e-07
Identities = 33/79 (41%), Positives = 48/79 (60%), Gaps = 9/79 (11%)
Frame = +2
Query: 11 KRMGAEVEADQL--------GDEWKGYV-LRVAGGNDKQGFPMKQGVLTNSRVRLLMSKG 163
KR+G ++ A +L G E+ V L + GG DK GFPM+ + RVR+L+SKG
Sbjct: 32 KRIGDQIPAKELNINLNELFGKEFPEDVKLEIRGGTDKDGFPMRPDIHGPRRVRVLLSKG 91
Query: 164 HSCYRPRRDGERKRKSVRG 220
+RP+ GER++K+VRG
Sbjct: 92 PG-FRPKEKGERRKKTVRG 109
>UniRef50_O29739 Cluster: 30S ribosomal protein S6e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Archaeoglobus fulgidus
Length = 129
Score = 54.4 bits (125), Expect = 3e-06
Identities = 25/59 (42%), Positives = 38/59 (64%)
Frame = +2
Query: 65 YVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANL 241
Y L++ GG D+ GFPM+ + +R RLL+S G +RP+ G RKRK VRG ++ ++
Sbjct: 48 YELKITGGTDRDGFPMRPDLPGTARRRLLLSGGVG-FRPKEKGLRKRKGVRGRVISKDI 105
>UniRef50_Q6LXY7 Cluster: 30S ribosomal protein S6e; n=4;
Archaea|Rep: 30S ribosomal protein S6e - Methanococcus
maripaludis
Length = 124
Score = 50.4 bits (115), Expect = 4e-05
Identities = 24/80 (30%), Positives = 49/80 (61%)
Frame = +2
Query: 11 KRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRD 190
K++G E+ + E +GY L++ GG+D+ GF M+ + ++R+L+ +G Y +
Sbjct: 28 KKIGDEISGSIV--ELEGYKLKITGGSDRCGFAMRHDIHGAMKMRVLLKEGPG-YNVKEK 84
Query: 191 GERKRKSVRGCIVDANLSVL 250
G R+RKS+RG + +++++
Sbjct: 85 GLRRRKSLRGNTISKDITLI 104
>UniRef50_Q9HMJ5 Cluster: 30S ribosomal protein S6e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S6e -
Halobacterium salinarium (Halobacterium halobium)
Length = 131
Score = 50.0 bits (114), Expect = 5e-05
Identities = 26/73 (35%), Positives = 44/73 (60%)
Frame = +2
Query: 2 FYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRP 181
F + +GA V+ +G + GY + + GG+D G PM++ V + + +L+ +G + + P
Sbjct: 29 FIGREIGAAVDGGAVGLD--GYTVEITGGSDDAGRPMREDVDGSDLMEVLL-EGGAGFNP 85
Query: 182 RRDGERKRKSVRG 220
DGERKR +VRG
Sbjct: 86 DEDGERKRVTVRG 98
>UniRef50_A7IAP8 Cluster: Ribosomal protein S6e; n=2; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S6e -
Methanoregula boonei (strain 6A8)
Length = 143
Score = 49.6 bits (113), Expect = 7e-05
Identities = 26/69 (37%), Positives = 43/69 (62%)
Frame = +2
Query: 11 KRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRD 190
K++G EV+A LG GY + + GG+D+ G P ++ + R +LL+++G + P +
Sbjct: 32 KKIGDEVDAGPLG--LAGYKILITGGSDQTGTPARKSLPGAGRRKLLLAEGVG-FHPVME 88
Query: 191 GERKRKSVR 217
GERKRK +R
Sbjct: 89 GERKRKMIR 97
>UniRef50_A2BJZ7 Cluster: 30S ribosomal protein S6e; n=2;
Desulfurococcales|Rep: 30S ribosomal protein S6e -
Hyperthermus butylicus (strain DSM 5456 / JCM 9403)
Length = 217
Score = 49.2 bits (112), Expect = 9e-05
Identities = 24/53 (45%), Positives = 33/53 (62%)
Frame = +2
Query: 62 GYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRG 220
GY L + GG+D GFPM + + R+L+S G + PR GER+RK+VRG
Sbjct: 146 GYKLLIRGGSDNSGFPMLPSIPGPVKKRVLLS-GPPGFHPREKGERRRKTVRG 197
>UniRef50_Q9Y9B6 Cluster: 30S ribosomal protein S6e; n=1; Aeropyrum
pernix|Rep: 30S ribosomal protein S6e - Aeropyrum pernix
Length = 235
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = +2
Query: 62 GYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRGCIV 229
G ++ GG D G PM GV + R ++L++ G + PR GER+RKSVRG ++
Sbjct: 155 GLKFKIRGGTDATGIPMHPGVPGSGRYKVLLA-GPPGFHPRERGERRRKSVRGRMI 209
>UniRef50_Q3LVW0 Cluster: Ribosomal protein S6; n=1; Bigelowiella
natans|Rep: Ribosomal protein S6 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 239
Score = 47.6 bits (108), Expect = 3e-04
Identities = 25/85 (29%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Frame = +2
Query: 11 KRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRP--R 184
+++G +E LG+++ + GG+DKQGF +K+ + T R+++ + KG R +
Sbjct: 29 RKIGDTIEGSILGEDFSRNEFLINGGHDKQGFLLKKNLNTFERLKINVKKGSLGNRSHFK 88
Query: 185 RDGERKRKSVRGCIVDANLSVLALL 259
R K+++VRG I+ + +S + L+
Sbjct: 89 RKNLTKKRTVRGGILSSEISSINLV 113
>UniRef50_Q980A6 Cluster: 30S ribosomal protein S6e; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S6e -
Sulfolobus solfataricus
Length = 214
Score = 47.2 bits (107), Expect = 4e-04
Identities = 20/50 (40%), Positives = 35/50 (70%)
Frame = +2
Query: 71 LRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRG 220
L++ GG+D GFPM+ V+ ++ ++L+S G + P +GER+RK++RG
Sbjct: 150 LKITGGSDNSGFPMRFDVIGAAKRKILLS-GPPGFYPNENGERRRKTIRG 198
>UniRef50_A0RYX5 Cluster: Ribosomal protein S6E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S6E - Cenarchaeum
symbiosum
Length = 133
Score = 45.2 bits (102), Expect = 0.002
Identities = 28/68 (41%), Positives = 39/68 (57%)
Frame = +2
Query: 17 MGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 196
+G+E +A LG E K +R+ GG+DK G PM+ V +R +L+S+G R G
Sbjct: 39 IGSEADATALGLEGK---IRITGGSDKSGVPMRPDVHGPARKYVLLSRGVG-LRDAERGG 94
Query: 197 RKRKSVRG 220
R RK VRG
Sbjct: 95 RTRKLVRG 102
>UniRef50_Q01CM6 Cluster: Chromosome 03 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 03 contig 1, DNA
sequence - Ostreococcus tauri
Length = 211
Score = 42.3 bits (95), Expect = 0.011
Identities = 22/53 (41%), Positives = 34/53 (64%)
Frame = -2
Query: 208 FTFSLSIAARSVT*VAL*HQKTNTAVCQDALFHRESLLVVAASDTKYIALPFI 50
FT + ++AA + AL H++ +T V Q AL H E+LLVV D + ++LPF+
Sbjct: 161 FTLASAVAAEAAR--ALGHEQEHTLVRQHALLHAEALLVVTTHDLEDVSLPFL 211
>UniRef50_Q4V5Z5 Cluster: IP07914p; n=1; Drosophila
melanogaster|Rep: IP07914p - Drosophila melanogaster
(Fruit fly)
Length = 147
Score = 40.7 bits (91), Expect = 0.033
Identities = 22/47 (46%), Positives = 31/47 (65%)
Frame = +2
Query: 137 RVRLLMSKGHSCYRPRRDGERKRKSVRGCIVDANLSVLALLLCARVP 277
R+RLL K HSC+ PR + RK K+VR V+AN+S L L++ + P
Sbjct: 19 RLRLL-KKIHSCFHPRCNKVRKCKTVRKYTVEANVSALTLVVLKKNP 64
Score = 34.3 bits (75), Expect = 2.9
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +1
Query: 310 PRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPK 459
P RLGP R+S I K++ L +EDD V+P K + + K R A K
Sbjct: 66 PCRLGPVRSSNISKIYYLCEEDD-------EVIPVKLQRRHQKKRQNATK 108
>UniRef50_A7DQN0 Cluster: Ribosomal protein S6e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S6e
- Candidatus Nitrosopumilus maritimus SCM1
Length = 137
Score = 40.7 bits (91), Expect = 0.033
Identities = 25/75 (33%), Positives = 40/75 (53%)
Frame = +2
Query: 17 MGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGE 196
+G E +A +G K L++ GG+DK G PM+ + +R +L+SKG + G+
Sbjct: 33 LGQETDASVVGLNGK---LKLTGGSDKSGVPMRNDIHGAARKYVLLSKGVG-LQDAEKGQ 88
Query: 197 RKRKSVRGCIVDANL 241
R RK +RG V +
Sbjct: 89 RVRKLMRGNTVSEEI 103
>UniRef50_Q978W7 Cluster: 30S ribosomal protein S6e; n=5;
Thermoplasmatales|Rep: 30S ribosomal protein S6e -
Thermoplasma volcanium
Length = 128
Score = 40.7 bits (91), Expect = 0.033
Identities = 25/82 (30%), Positives = 49/82 (59%)
Frame = +2
Query: 11 KRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRD 190
+++G EV D + + GY +++ GG+ GF M+ + T + ++L+ K S YR ++
Sbjct: 32 RKIGEEV--DGVFFDLVGYKMKITGGSSVDGFAMRPDLQTQGKKQILV-KYTSGYR-GKN 87
Query: 191 GERKRKSVRGCIVDANLSVLAL 256
G RKR + RG I+ ++++ + L
Sbjct: 88 GIRKRITARGSIIGSDITQINL 109
>UniRef50_Q8PU79 Cluster: 30S ribosomal protein S6e; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S6e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 136
Score = 40.7 bits (91), Expect = 0.033
Identities = 21/53 (39%), Positives = 31/53 (58%)
Frame = +2
Query: 62 GYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRG 220
GY +++ GG D GF MK + R R+L + G Y P+ G+R+RK +RG
Sbjct: 47 GYKVQITGGCDGSGFVMKPDLPGPRRQRILTATGVG-YVPKLPGQRRRKMMRG 98
>UniRef50_A2A3R7 Cluster: Ribosomal protein S6; n=1; Homo
sapiens|Rep: Ribosomal protein S6 - Homo sapiens
(Human)
Length = 91
Score = 37.5 bits (83), Expect = 0.31
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +2
Query: 2 FYEKRMGAEVEADQLGDEWK 61
FYEKRM EV AD LG+EWK
Sbjct: 27 FYEKRMATEVAADALGEEWK 46
>UniRef50_Q8ZX25 Cluster: 30S ribosomal protein S6e; n=5;
Thermoproteaceae|Rep: 30S ribosomal protein S6e -
Pyrobaculum aerophilum
Length = 148
Score = 37.5 bits (83), Expect = 0.31
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Frame = +2
Query: 59 KGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRPRRDGERKRKSVRG-CIVDA 235
KG +R+ GG+ +G PM GV + + +++ G Y P + G +K+K VRG I D+
Sbjct: 51 KGAKIRITGGSGIEGAPMHPGVPGPVK-KYILADGPPGYWPPKKGMKKKKLVRGNTISDS 109
Query: 236 NLSVLALLL 262
+ + A+++
Sbjct: 110 IVQINAVIV 118
>UniRef50_Q74MJ5 Cluster: 30S ribosomal protein S6e; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S6e -
Nanoarchaeum equitans
Length = 126
Score = 35.9 bits (79), Expect = 0.94
Identities = 15/40 (37%), Positives = 27/40 (67%)
Frame = +2
Query: 5 YEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGV 124
Y K++G ++ ++G + GY L++ GG+D GFPM++ V
Sbjct: 31 YGKKIGDTIDGSKIGLD--GYELKITGGSDIAGFPMRKEV 68
>UniRef50_Q87BM0 Cluster: Putative uncharacterized protein; n=1;
Xylella fastidiosa Temecula1|Rep: Putative
uncharacterized protein - Xylella fastidiosa (strain
Temecula1 / ATCC 700964)
Length = 109
Score = 35.1 bits (77), Expect = 1.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 61 GLCTSCRWRQRQARIPDETGRPDKQPCSSSDVKG 162
G C RWR ++ + DE G + PC+ DV+G
Sbjct: 17 GACCMARWRCQEINVTDEVGYGMRLPCTPHDVRG 50
>UniRef50_A7PB79 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 290
Score = 33.9 bits (74), Expect = 3.8
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = -3
Query: 309 YISISQSRNFLGTLAHNNRAKTER-LASTIHPRTDLRFLSPSR 184
++ + Q + + TL H N+ + +R L+ T+HPRT R SP R
Sbjct: 124 FLYVGQPKKIVLTLPHYNQVQNKRGLSMTMHPRTVFRLPSPLR 166
>UniRef50_A7DL47 Cluster: Flagellar hook-associated 3 family
protein; n=2; Methylobacterium extorquens PA1|Rep:
Flagellar hook-associated 3 family protein -
Methylobacterium extorquens PA1
Length = 350
Score = 33.5 bits (73), Expect = 5.0
Identities = 21/72 (29%), Positives = 33/72 (45%)
Frame = -3
Query: 354 QLTDFGSTFGT*TAGYISISQSRNFLGTLAHNNRAKTERLASTIHPRTDLRFLSPSRRGL 175
+ D G+T G AG + + L +L +N A T RLA+T T++R + +
Sbjct: 38 RFADVGATLGGGVAGAFGLRRQSAVLASLTQSNAAATSRLAATQGALTEIRSSADTTLNE 97
Query: 174 *HEWPFDIRRRT 139
P D R +T
Sbjct: 98 LTALPADQRAKT 109
>UniRef50_Q6N427 Cluster: Phytoene dehydrogenase-related protein;
n=24; Bacteria|Rep: Phytoene dehydrogenase-related
protein - Rhodopseudomonas palustris
Length = 590
Score = 33.1 bits (72), Expect = 6.6
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
Frame = -1
Query: 128 SGRPVSSGILACRCRQ-RHEVHSPSIHRLTDQPL 30
SGRPV+SGILA C Q +++ +P HR + P+
Sbjct: 22 SGRPVTSGILASLCEQWQNQPRTPLSHRSGNLPM 55
>UniRef50_Q26G27 Cluster: Cytoplasmic aminopeptidase; n=1;
Flavobacteria bacterium BBFL7|Rep: Cytoplasmic
aminopeptidase - Flavobacteria bacterium BBFL7
Length = 224
Score = 33.1 bits (72), Expect = 6.6
Identities = 22/81 (27%), Positives = 36/81 (44%)
Frame = -3
Query: 393 DITTYIIFFAKVEQLTDFGSTFGT*TAGYISISQSRNFLGTLAHNNRAKTERLASTIHPR 214
D+T + V++ T++G FG AG++ +G H N ++E + IHP
Sbjct: 135 DLTGAAFYDYCVQKATEYGWEFGGPIAGHL--------IGHFPHEN-LESENKLNYIHPE 185
Query: 213 TDLRFLSPSRRGL*HEWPFDI 151
D +P G EW +I
Sbjct: 186 NDKNLFAPDGNGNKREWILEI 206
>UniRef50_A6L045 Cluster: Putative uncharacterized protein; n=1;
Bacteroides vulgatus ATCC 8482|Rep: Putative
uncharacterized protein - Bacteroides vulgatus (strain
ATCC 8482 / DSM 1447 / NCTC 11154)
Length = 541
Score = 32.7 bits (71), Expect = 8.8
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +1
Query: 262 VRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYV 393
V +EI LT GNVP+ + R ++RK NLS EDD+ Y+
Sbjct: 497 VNLSTKEISMLT-GNVPKTINMNRY-RLRKSLNLSSEDDLTDYL 538
>UniRef50_A2F5X7 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 1146
Score = 32.7 bits (71), Expect = 8.8
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +1
Query: 298 DGNVPRRLGPKRASKIRK-LFNLSKEDDVRRYVVKRVLPAKEGKENAKPRHKAPKIQR 468
D + + PK+ S +K + + S EDD K++L + + E KPR K+P+ +R
Sbjct: 1012 DSSDEEEIKPKQKSPQKKPILSSSSEDDAIPPPKKKLLDSSDDDEEIKPRQKSPQKKR 1069
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 659,778,414
Number of Sequences: 1657284
Number of extensions: 13054071
Number of successful extensions: 37288
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 36094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37255
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54545459628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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