Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00602
         (692 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132902-1|CAB81996.1|  246|Caenorhabditis elegans Hypothetical ...   150   1e-36
AL023847-1|CAA19545.1|  364|Caenorhabditis elegans Hypothetical ...    28   5.5  
U41995-2|AAA83460.1|  317|Caenorhabditis elegans Serpentine rece...    28   7.3  
Z81593-10|CAI94504.1|  349|Caenorhabditis elegans Hypothetical p...    27   9.6  
U50193-1|AAA91247.2|  532|Caenorhabditis elegans Hypothetical pr...    27   9.6  

>AL132902-1|CAB81996.1|  246|Caenorhabditis elegans Hypothetical
           protein Y71A12B.1 protein.
          Length = 246

 Score =  150 bits (363), Expect = 1e-36
 Identities = 65/87 (74%), Positives = 76/87 (87%)
 Frame = +2

Query: 2   FYEKRMGAEVEADQLGDEWKGYVLRVAGGNDKQGFPMKQGVLTNSRVRLLMSKGHSCYRP 181
           F+EKRM  EV  D LGDEWKGYV+R+ GGNDKQGFPMKQG+LTN RVRLL+ KG SCYR 
Sbjct: 27  FFEKRMSQEVAIDALGDEWKGYVVRIGGGNDKQGFPMKQGILTNGRVRLLLKKGQSCYRE 86

Query: 182 RRDGERKRKSVRGCIVDANLSVLALLL 262
           R++GERKRKSVRGCIVDAN+S L+L++
Sbjct: 87  RKNGERKRKSVRGCIVDANMSALSLVI 113



 Score = 81.4 bits (192), Expect = 6e-16
 Identities = 44/77 (57%), Positives = 53/77 (68%)
 Frame = +1

Query: 247 LGSVIVRKGAQEIPGLTDGNVPRRLGPKRASKIRKLFNLSKEDDVRRYVVKRVLPAKEGK 426
           L  VIV+KG  EI GLTD  +PR+LGPKRASKIRKLFNL+K DDV +YV+       +G 
Sbjct: 109 LSLVIVKKGDGEIEGLTDSVLPRKLGPKRASKIRKLFNLTKHDDVTKYVITHDKTFPDG- 167

Query: 427 ENAKPRHKAPKIQRLVT 477
                +  APKIQRL+T
Sbjct: 168 ---VTKTIAPKIQRLIT 181


>AL023847-1|CAA19545.1|  364|Caenorhabditis elegans Hypothetical
           protein Y57A10C.3 protein.
          Length = 364

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = -1

Query: 629 APAFNLVLATHLGFLLSLCKQFSIFSLRGLALSETLLL 516
           AP F +     +G L+++C Q SIFS+  L + +  +L
Sbjct: 69  APFFGIWFELIIGKLITMCYQLSIFSIGNLEIRKFYVL 106


>U41995-2|AAA83460.1|  317|Caenorhabditis elegans Serpentine
           receptor, class x protein46 protein.
          Length = 317

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
 Frame = -3

Query: 447 MSGFSVFFSFLSWEHAFDDITTYIIFFAKVEQLTDFGSTFGT*TAGYISISQSRNF-LGT 271
           +S F+  F +++W  AF D       F  V  +  F        + YIS+S    + +  
Sbjct: 33  VSSFNKSFGYITWNQAFGDALQSTTVFTLVVPMVFFDLEVLKANSNYISLSMLLGYDISV 92

Query: 270 LAH 262
           L+H
Sbjct: 93  LSH 95


>Z81593-10|CAI94504.1|  349|Caenorhabditis elegans Hypothetical
           protein T20B3.15 protein.
          Length = 349

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -1

Query: 590 FLLSLCKQFSIFSLRGLALSETLLL 516
           FL+S    FSIF++ G A S+ L+L
Sbjct: 283 FLMSTVSVFSIFAIGGFAFSDDLIL 307


>U50193-1|AAA91247.2|  532|Caenorhabditis elegans Hypothetical
           protein ZK328.4 protein.
          Length = 532

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +1

Query: 277 QEIPGLTDGNVPRRLGPKRASKIRKLFNLSK-EDDVRRYVVKRVLPAKEGKENAKPRHK 450
           Q  P + D N   R  PK   K  K+ +LS  E+D +  V     P+KE KE  K R K
Sbjct: 109 QLYPEMFDSNQKPRQKPKEVKKALKVESLSDYENDDKENVPPCGKPSKE-KEEKKQRTK 166


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,932,002
Number of Sequences: 27780
Number of extensions: 303229
Number of successful extensions: 804
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1592382278
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)