Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00601
         (396 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O96054 Cluster: MBF2; n=3; Bombycoidea|Rep: MBF2 - Sami...   123   1e-27
UniRef50_Q259I7 Cluster: H0101F08.6 protein; n=4; Oryza sativa|R...    36   0.22 
UniRef50_UPI00015B5748 Cluster: PREDICTED: similar to ENSANGP000...    33   2.7  
UniRef50_UPI0000D5711B Cluster: PREDICTED: similar to CG9386-PA;...    32   3.5  
UniRef50_A0NDL8 Cluster: ENSANGP00000031402; n=3; Culicidae|Rep:...    32   3.5  
UniRef50_Q8TQN0 Cluster: Putative uncharacterized protein; n=1; ...    32   4.6  
UniRef50_Q9WZI9 Cluster: D-tyrosyl-tRNA(Tyr) deacylase; n=4; Bac...    32   4.6  
UniRef50_UPI00015B5015 Cluster: PREDICTED: hypothetical protein;...    31   6.1  
UniRef50_Q1CYD4 Cluster: Putative lipoprotein; n=2; Cystobacteri...    31   6.1  
UniRef50_A1CF55 Cluster: LPXTG-motif cell wall anchor domain pro...    31   6.1  
UniRef50_Q1L8W8 Cluster: Novel protein; n=4; Danio rerio|Rep: No...    31   8.1  
UniRef50_A2S2H7 Cluster: Putative uncharacterized protein; n=1; ...    31   8.1  
UniRef50_Q5TS84 Cluster: ENSANGP00000029017; n=2; Anopheles gamb...    31   8.1  

>UniRef50_O96054 Cluster: MBF2; n=3; Bombycoidea|Rep: MBF2 - Samia
           cynthia (Cynthia moth) (Ailanthus silkmoth)
          Length = 113

 Score =  123 bits (296), Expect = 1e-27
 Identities = 57/85 (67%), Positives = 69/85 (81%)
 Frame = +2

Query: 2   MKLQIXXXXXXXXXIVECGHTFVGTSVNRPLVYHHDVQYSSKMFRKRVENLHFSLPHVPS 181
           MKL +         IV+C HTF+GTSV RPL+YHHDVQYSSK+F+KRVENL+FSLP VP+
Sbjct: 1   MKLLLLVSLITFIVIVDCTHTFLGTSVLRPLIYHHDVQYSSKIFKKRVENLYFSLPSVPT 60

Query: 182 IFGRSIQGILAFDKTYSTASANITQ 256
            +GR+IQGILA+DKT S ASAN+TQ
Sbjct: 61  NYGRTIQGILAYDKTNSGASANVTQ 85



 Score = 55.6 bits (128), Expect = 3e-07
 Identities = 21/28 (75%), Positives = 27/28 (96%)
 Frame = +1

Query: 256 GGIGYNFVNLRMKSERGSKIHYDVYIFA 339
           GG+GYNF+NLRMKS+RG +IHYDVY++A
Sbjct: 86  GGLGYNFMNLRMKSDRGREIHYDVYVYA 113


>UniRef50_Q259I7 Cluster: H0101F08.6 protein; n=4; Oryza sativa|Rep:
           H0101F08.6 protein - Oryza sativa (Rice)
          Length = 433

 Score = 36.3 bits (80), Expect = 0.22
 Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
 Frame = +2

Query: 59  HTFVGTSVNRPLVYHH-DVQYSSKMFRKRVENLHFSLPHVPSIF 187
           +T V TS   PL +HH  +Q S + F+ RV + + + PH+PS F
Sbjct: 78  YTMVPTSAMLPLQHHHRQLQISQENFQDRVPSNNVAAPHLPSNF 121


>UniRef50_UPI00015B5748 Cluster: PREDICTED: similar to
           ENSANGP00000031402; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to ENSANGP00000031402 - Nasonia
           vitripennis
          Length = 118

 Score = 32.7 bits (71), Expect = 2.7
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = +1

Query: 256 GGIGYNFVNLRMKSERGSKIHYDVYIFA 339
           GG+GY+++ +  KS+R   I+Y V I+A
Sbjct: 90  GGLGYSYITVHFKSKRSHSINYIVEIYA 117


>UniRef50_UPI0000D5711B Cluster: PREDICTED: similar to CG9386-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG9386-PA - Tribolium castaneum
          Length = 657

 Score = 32.3 bits (70), Expect = 3.5
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = -2

Query: 143 LSYGTFSSCTARHGGRPRAY*RWCRRKCDRIPRSPQR 33
           + +  FS CT++    P+A  R   R+C+++P  PQ+
Sbjct: 6   MQFFRFSHCTSKADTSPKALYRHLIRQCEKLPEGPQK 42


>UniRef50_A0NDL8 Cluster: ENSANGP00000031402; n=3; Culicidae|Rep:
           ENSANGP00000031402 - Anopheles gambiae str. PEST
          Length = 115

 Score = 32.3 bits (70), Expect = 3.5
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +1

Query: 250 HPGGIGYNFVNLRMKSERGSKIHYDVYIF 336
           + GGIGYN+  + +KS+RG   ++ V I+
Sbjct: 85  YAGGIGYNYTTVHLKSQRGHGYNFIVEIY 113


>UniRef50_Q8TQN0 Cluster: Putative uncharacterized protein; n=1;
            Methanosarcina acetivorans|Rep: Putative uncharacterized
            protein - Methanosarcina acetivorans
          Length = 2115

 Score = 31.9 bits (69), Expect = 4.6
 Identities = 12/33 (36%), Positives = 20/33 (60%)
 Frame = +1

Query: 232  HCFCEHHPGGIGYNFVNLRMKSERGSKIHYDVY 330
            HC+CE   G IG+N    + K+   S+I+ ++Y
Sbjct: 920  HCYCEFENGNIGWNEAEGKYKAYLTSEIYIELY 952


>UniRef50_Q9WZI9 Cluster: D-tyrosyl-tRNA(Tyr) deacylase; n=4;
           Bacteria|Rep: D-tyrosyl-tRNA(Tyr) deacylase - Thermotoga
           maritima
          Length = 149

 Score = 31.9 bits (69), Expect = 4.6
 Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
 Frame = -3

Query: 268 SRFRL-GDVRRSSAIGLVEGQNALNGPPEYGRYMRQAEMEVFNSLTEHFRAVLHVMVVDQ 92
           S+F L GD RR       E      G   Y +++     +     T  FRA +HV +V+ 
Sbjct: 77  SQFTLYGDCRRGKRPSFTEAAPPDKGKALYEKFVELLRKKGLKVETGKFRAHMHVHLVND 136

Query: 91  GPIDAGADES 62
           GP+    D S
Sbjct: 137 GPVTILLDSS 146


>UniRef50_UPI00015B5015 Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 136

 Score = 31.5 bits (68), Expect = 6.1
 Identities = 13/28 (46%), Positives = 20/28 (71%)
 Frame = +1

Query: 256 GGIGYNFVNLRMKSERGSKIHYDVYIFA 339
           GG+GY+ V L+ KS+R   I++ V I+A
Sbjct: 104 GGVGYSNVTLKFKSQRSHGINFVVQIYA 131


>UniRef50_Q1CYD4 Cluster: Putative lipoprotein; n=2;
           Cystobacterineae|Rep: Putative lipoprotein - Myxococcus
           xanthus (strain DK 1622)
          Length = 348

 Score = 31.5 bits (68), Expect = 6.1
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +3

Query: 63  LSSAPASIGPWSTTMTCSTARKCSVRELKTSISACLMYLPYSG 191
           L +  A+I  W   +T ST+  CSVR    + +A   Y P+ G
Sbjct: 166 LDAGRATISGWRVGVTKSTSDPCSVRPANKATAALYTYTPWVG 208


>UniRef50_A1CF55 Cluster: LPXTG-motif cell wall anchor domain
           protein, putative; n=6; Trichocomaceae|Rep: LPXTG-motif
           cell wall anchor domain protein, putative - Aspergillus
           clavatus
          Length = 1013

 Score = 31.5 bits (68), Expect = 6.1
 Identities = 30/113 (26%), Positives = 47/113 (41%)
 Frame = -3

Query: 367 HLFIAEAIIKQKCIHRNEFLIRARSSCGD*RSYSRFRLGDVRRSSAIGLVEGQNALNGPP 188
           H  +  A++K K +  NE      ++  D  + S   LG  +  S      G + +NG  
Sbjct: 641 HPLLHSALLKAKTVLSNEVFKALDAAVTDALALSN-TLGTNQAPSG-----GVSCVNGYS 694

Query: 187 EYGRYMRQAEMEVFNSLTEHFRAVLHVMVVDQGPIDAGADESVTAFHDHRSGE 29
              R  R+    V  SLTE   A+  V    Q    +G D+++T  H   +GE
Sbjct: 695 PSDRQNRRKADSVCRSLTELCIALSDVQPPQQQQASSGDDDTITQLHVSTNGE 747


>UniRef50_Q1L8W8 Cluster: Novel protein; n=4; Danio rerio|Rep: Novel
           protein - Danio rerio (Zebrafish) (Brachydanio rerio)
          Length = 328

 Score = 31.1 bits (67), Expect = 8.1
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -3

Query: 148 FNSLTEHFRAVLHVMVVDQGPIDAGADESVTAFHDHRSG 32
           F  +  H  A L   V + GP+  G +  + +FH +RSG
Sbjct: 224 FRIVPRHNEAALQSAVANIGPVSVGINAKLLSFHRYRSG 262


>UniRef50_A2S2H7 Cluster: Putative uncharacterized protein; n=1;
           Burkholderia mallei NCTC 10229|Rep: Putative
           uncharacterized protein - Burkholderia mallei (strain
           NCTC 10229)
          Length = 53

 Score = 31.1 bits (67), Expect = 8.1
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
 Frame = -2

Query: 119 CTARHGGRPRAY*RWCRRKCDRIP--RSPQRRVATQRFA 9
           C     G P +  R CRR  DR+P  R P RR A+ RF+
Sbjct: 11  CRMSDVGCPMSDVRCCRRAVDRVPGARPPYRRAASFRFS 49


>UniRef50_Q5TS84 Cluster: ENSANGP00000029017; n=2; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000029017 - Anopheles gambiae
           str. PEST
          Length = 554

 Score = 31.1 bits (67), Expect = 8.1
 Identities = 18/56 (32%), Positives = 25/56 (44%)
 Frame = -3

Query: 217 EGQNALNGPPEYGRYMRQAEMEVFNSLTEHFRAVLHVMVVDQGPIDAGADESVTAF 50
           E  N L  P E  +Y+R ++        EHF  V+H +  D+   D  A E V  F
Sbjct: 501 ERLNLLPVPKELNKYLRYSDYSTIVYFLEHFETVMHALYEDEE--DEAALEPVEDF 554


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 385,992,711
Number of Sequences: 1657284
Number of extensions: 7607446
Number of successful extensions: 20006
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 19471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20000
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16503508437
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)