Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00600
(629 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) 32 0.33
SB_20195| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.44
SB_39786| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.0
SB_19124| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_59010| Best HMM Match : rve (HMM E-Value=0.0052) 29 2.4
SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_12076| Best HMM Match : CHCH (HMM E-Value=0.28) 29 2.4
SB_47415| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.1
SB_51968| Best HMM Match : PT (HMM E-Value=0.54) 29 4.1
SB_31697| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_50351| Best HMM Match : I-set (HMM E-Value=0.00016) 28 7.2
SB_51085| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_44452| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_5854| Best HMM Match : Pkinase_Tyr (HMM E-Value=4.3e-17) 27 9.5
SB_58507| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.5
SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07) 27 9.5
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 40.3 bits (90), Expect = 0.001
Identities = 21/61 (34%), Positives = 28/61 (45%)
Frame = -2
Query: 319 QSREQGPQDHHRGPAPRHSEKHRRPKPTELSVCCRERSETPRHRNKPSRPVWSRRSPHHF 140
+SR + P+ R +PR + R P P S R RS +PR R+ SR RR
Sbjct: 225 RSRSRSPRRRRRSRSPRRRRRSRSPSPHHRSHRSRSRSRSPRRRHSRSRSPTHRRHRSRS 284
Query: 139 H 137
H
Sbjct: 285 H 285
>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
Length = 765
Score = 32.3 bits (70), Expect = 0.33
Identities = 20/58 (34%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = -2
Query: 316 SREQGPQDHH-RGPAPRHSEKHRRPKPTELSVCCRERSETPRHRNKPSRPVWSRRSPH 146
SR + P+ R P R K R P+ S CR R R R+ SR RSP+
Sbjct: 282 SRSRSPRSKRSRSPRKRRRSKSRSPRRYRDSSSCRRRRSRSRSRSPKSRLRSRSRSPY 339
>SB_20195| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1351
Score = 31.9 bits (69), Expect = 0.44
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -2
Query: 334 TLRAVQSREQGPQDHHRGPAPRHSEKHRRPKPTELSVCCRERSETPRHRNKPS 176
T+ V+ E+ +D +GP R + H R E+ R+RS P +R S
Sbjct: 1092 TIALVERLEEVERDGRQGPDSRRRQTHERRGGKEVREAIRDRSSQPDYRRADS 1144
>SB_39786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = -2
Query: 334 TLRAVQSREQGPQDHHRGPAPRHSEKHRRPKPTELSVCCRERSETPRHRNKPSRPVWSRR 155
T + +R P R P P ++H P+P++ ++R P + + RP +R
Sbjct: 194 TRDTINNRHPRPSQQQRHPRPSQQQRH--PRPSQ-----QQRYPRPSQQQRQPRPSQQQR 246
Query: 154 SPHH 143
P H
Sbjct: 247 YPRH 250
>SB_19124| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 224
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/59 (27%), Positives = 26/59 (44%)
Frame = -2
Query: 319 QSREQGPQDHHRGPAPRHSEKHRRPKPTELSVCCRERSETPRHRNKPSRPVWSRRSPHH 143
Q R P R P P ++H P+P++ ++R P + + RP +R P H
Sbjct: 168 QQRYPRPSQQQRYPRPSQQQRH--PRPSQ-----QQRHPRPSQQQRYPRPTEQQRHPRH 219
>SB_59010| Best HMM Match : rve (HMM E-Value=0.0052)
Length = 935
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/59 (32%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = -2
Query: 325 AVQSREQGPQDHHRGPAPRHSEKHRRPKPTELSVCCRER-SETPRHRNKPSRPVWSRRS 152
+ Q EQ Q+ + P +H E R P + RER + PR P+ P W+ RS
Sbjct: 563 SAQPDEQLAQELAQEPGKQHQEPARTPVAAVPAATTRERANHEPRTARDPTSP-WTSRS 620
>SB_51829| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1414
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 7/67 (10%)
Frame = -2
Query: 328 RAVQSREQGPQDHHRGPAPRHSEKHRRPKPTELSVCCRERSETP--RHRNKPSR-----P 170
R V R + P DHH P H+ P+ + + R TP R PSR P
Sbjct: 324 RHVDERPRRPHDHHADPYDSHAIAEEYPRGRDQGMEEGRRDITPESHRRGPPSRHDRAPP 383
Query: 169 VWSRRSP 149
S+R+P
Sbjct: 384 PASKRTP 390
>SB_12076| Best HMM Match : CHCH (HMM E-Value=0.28)
Length = 115
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = -2
Query: 307 QGPQDHHRGPAPRHSEKHRRPKPTELSVCCRERSETPRHRNKPSRPVWSRRSPH 146
Q P + R P H +P E+S C ++ +E R +P++ + PH
Sbjct: 56 QQPHEMSRCTQPPHEMSRCTQQPNEMSRCTQQPNEMSRCTQQPNKMSRCTQQPH 109
>SB_47415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 584
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Frame = -2
Query: 301 PQDHHRGPAP--RHSEKHRRPKPTELSVC 221
PQ H G P RH+E HR P P L C
Sbjct: 445 PQHHSSGALPGIRHAELHRVPGPKGLDSC 473
>SB_51968| Best HMM Match : PT (HMM E-Value=0.54)
Length = 514
Score = 28.7 bits (61), Expect = 4.1
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = -2
Query: 280 PAPRHSEKHRRPKPTELSVCCRERSETPRHRNKPSRPV 167
P E+ P+PT+ R+R T R KP++P+
Sbjct: 272 PEVEPEEERATPRPTKAKPTTRKRMPTERPTKKPTKPL 309
>SB_31697| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 27.9 bits (59), Expect = 7.2
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 10/66 (15%)
Frame = -2
Query: 316 SREQGPQDHHRGPAPRHSEKHRRPKPTEL----------SVCCRERSETPRHRNKPSRPV 167
S E+ P+D P +EK KP E S ++ + +P + PS+P
Sbjct: 414 SSEEEPEDK---PPKEKAEKEEEKKPLEAKTTPNVGSGASSAFQKNTPSPSPKTTPSKPS 470
Query: 166 WSRRSP 149
WSR +P
Sbjct: 471 WSRPTP 476
>SB_50351| Best HMM Match : I-set (HMM E-Value=0.00016)
Length = 419
Score = 27.9 bits (59), Expect = 7.2
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = -2
Query: 316 SREQGPQDHHRGPAPRHSEKHRRPKPTELSVCCRERSET--PRHRNKPSRPVWSR 158
SR Q + P PR S+K P P+ ++ S T PR +K S P+ SR
Sbjct: 326 SRGQSNKQSSPTPPPRQSDKQSPPTPSR-GQSNKQSSPTPPPRQSDKQSPPIPSR 379
>SB_51085| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1251
Score = 27.5 bits (58), Expect = 9.5
Identities = 11/36 (30%), Positives = 16/36 (44%)
Frame = -2
Query: 325 AVQSREQGPQDHHRGPAPRHSEKHRRPKPTELSVCC 218
++ E+G Q P P K +RP PT + C
Sbjct: 1032 SLHEEEKGNQKQEASPHPPRGRKRKRPTPTTTTEGC 1067
>SB_44452| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2
Query: 274 PRHSEKHRRPKPTELSVCCRERSETPRHRNKPSRP 170
PR ++H P T S R RS+TP++R + S P
Sbjct: 111 PRQ-QRHTPPSFTPRSSISRRRSDTPKNRRRISVP 144
>SB_5854| Best HMM Match : Pkinase_Tyr (HMM E-Value=4.3e-17)
Length = 1850
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/63 (26%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -2
Query: 334 TLRAVQSREQGPQDHHRGPAPRHSEKHRRPKPTELSVCCRERSETPRHRNKPSRP-VWSR 158
T V++ + Q + R H+ + P +L C S TP N+P+ P V+
Sbjct: 768 TAEEVENELEAYQSYIRSSGEDHAPESPPPLRKQLIPICNSSSSTPVDENEPTFPDVFEP 827
Query: 157 RSP 149
SP
Sbjct: 828 PSP 830
>SB_58507| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2353
Score = 27.5 bits (58), Expect = 9.5
Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Frame = -2
Query: 292 HHRGPAPRHSEKHRRPKP---TELSVCCRERSE 203
H AP + KHRRPKP E S +E+S+
Sbjct: 1147 HQSSHAPSVNNKHRRPKPDFLEEQSTLVKEQSD 1179
>SB_9843| Best HMM Match : LIM (HMM E-Value=8.4e-07)
Length = 2128
Score = 27.5 bits (58), Expect = 9.5
Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
Frame = -2
Query: 307 QGPQDHHRGPAPRHSEKHRRPKPTELSVCCRERSETPR----HRNKPSRPVWSRRSPHH 143
+GP+D R PR ++ R +P R E PR R++ R RR H
Sbjct: 1807 RGPRDDQREERPRRDDERREERPPRPRSGMDRRDERPRPDIDRRDERLRHEADRRGDRH 1865
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,906,269
Number of Sequences: 59808
Number of extensions: 341964
Number of successful extensions: 1161
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1154
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1572561250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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