Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00600
         (629 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    27   0.65 
AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin b...    24   4.6  
DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein O-fucosylt...    23   6.1  

>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 26.6 bits (56), Expect = 0.65
 Identities = 20/55 (36%), Positives = 25/55 (45%)
 Frame = +2

Query: 293 VLRSLLTALHRPEGDRRGCEPRYPGHPQPRRQSRLAKGPAMVKLQLFGQQRRESP 457
           VL SLL A  +  G +    PR P  P PRR S  A+     + Q   Q  +E P
Sbjct: 183 VLNSLLAA--KVGGGQPSASPRQPPTPLPRRSS--AQPQQQQQQQQRNQHEQEQP 233


>AJ439060-17|CAD27768.1|  568|Anopheles gambiae putative chitin
           binding protein protein.
          Length = 568

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -2

Query: 283 GPAPRHSEKHRRPKP 239
           GP P  +E+HRR +P
Sbjct: 324 GPVPGAAERHRRRRP 338


>DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein
           O-fucosyltransferase 1 protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 6.1
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 421 APALWPAAPRVS 456
           AP+LWP A R+S
Sbjct: 102 APSLWPPAERIS 113


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 581,444
Number of Sequences: 2352
Number of extensions: 10368
Number of successful extensions: 35
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 61468785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)