Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00600
(629 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC105006-1|AAI05007.1| 312|Homo sapiens PRP38 pre-mRNA processi... 33 0.83
BC105004-1|AAI05005.1| 312|Homo sapiens PRP38 pre-mRNA processi... 33 0.83
BC063655-1|AAH63655.1| 125|Homo sapiens PRP38 pre-mRNA processi... 33 0.83
BC000777-1|AAH00777.2| 125|Homo sapiens PRP38 pre-mRNA processi... 33 0.83
AL513218-9|CAI12289.1| 312|Homo sapiens PRP38 pre-mRNA processi... 33 0.83
AK092038-1|BAC03796.1| 312|Homo sapiens protein ( Homo sapiens ... 33 0.83
AK027842-1|BAB55405.1| 236|Homo sapiens protein ( Homo sapiens ... 33 0.83
AL592424-4|CAI16377.1| 962|Homo sapiens sema domain, transmembr... 32 1.5
AL592424-3|CAI16378.1| 930|Homo sapiens sema domain, transmembr... 32 1.5
AL592424-2|CAI16376.1| 922|Homo sapiens sema domain, transmembr... 32 1.5
AL122064-1|CAB59243.1| 294|Homo sapiens hypothetical protein pr... 32 1.5
AF339154-1|AAL72100.1| 962|Homo sapiens semaphorin Y protein. 32 1.5
AF339153-1|AAL72099.1| 922|Homo sapiens semaphorin Y short isof... 32 1.5
AF339152-1|AAL72098.1| 930|Homo sapiens semaphorin Y short isof... 32 1.5
AF055020-1|AAC09365.1| 446|Homo sapiens unknown protein. 32 1.5
AB058772-1|BAB47498.1| 935|Homo sapiens KIAA1869 protein protein. 32 1.5
AB022434-1|BAB20670.1| 930|Homo sapiens semaphorin Y protein. 32 1.5
AY681966-1|AAV87216.1| 2069|Homo sapiens citron protein. 31 3.4
AY257469-1|AAP13528.1| 2027|Homo sapiens rho/rac-interacting cit... 31 3.4
AC002563-2|AAB71327.1| 1286|Homo sapiens WUGSC:H_127H14.1 protein. 31 3.4
BC093874-1|AAH93874.1| 330|Homo sapiens potassium channel, subf... 30 7.8
AL118522-1|CAC14068.1| 330|Homo sapiens potassium channel, subf... 30 7.8
AK131502-1|BAD18646.1| 183|Homo sapiens protein ( Homo sapiens ... 30 7.8
AF336342-1|AAK37518.1| 330|Homo sapiens tandem pore domain pota... 30 7.8
AF294352-1|AAK97093.1| 330|Homo sapiens tandem acid-sensitive p... 30 7.8
AF294351-1|AAK97092.1| 330|Homo sapiens tandem acid-sensitive p... 30 7.8
AF294350-1|AAK97091.1| 330|Homo sapiens tandem acid-sensitive p... 30 7.8
AF257081-1|AAG33127.1| 330|Homo sapiens two pore potassium chan... 30 7.8
>BC105006-1|AAI05007.1| 312|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing A, isoform 2
protein.
Length = 312
Score = 33.1 bits (72), Expect = 0.83
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = -2
Query: 334 TLRAVQSREQGPQDHHRGPAPRHSEKHRRPKPTELSVCCRERSETPRHRNKPSRPVWSRR 155
TLR +SR + P+ R P R R ++ R RS RHR++ P R
Sbjct: 228 TLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRS 287
Query: 154 SPHHFH 137
H H
Sbjct: 288 HRHRSH 293
>BC105004-1|AAI05005.1| 312|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing A protein.
Length = 312
Score = 33.1 bits (72), Expect = 0.83
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = -2
Query: 334 TLRAVQSREQGPQDHHRGPAPRHSEKHRRPKPTELSVCCRERSETPRHRNKPSRPVWSRR 155
TLR +SR + P+ R P R R ++ R RS RHR++ P R
Sbjct: 228 TLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRS 287
Query: 154 SPHHFH 137
H H
Sbjct: 288 HRHRSH 293
>BC063655-1|AAH63655.1| 125|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing A protein.
Length = 125
Score = 33.1 bits (72), Expect = 0.83
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = -2
Query: 334 TLRAVQSREQGPQDHHRGPAPRHSEKHRRPKPTELSVCCRERSETPRHRNKPSRPVWSRR 155
TLR +SR + P+ R P R R ++ R RS RHR++ P R
Sbjct: 41 TLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRS 100
Query: 154 SPHHFH 137
H H
Sbjct: 101 HRHRSH 106
>BC000777-1|AAH00777.2| 125|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing A protein.
Length = 125
Score = 33.1 bits (72), Expect = 0.83
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = -2
Query: 334 TLRAVQSREQGPQDHHRGPAPRHSEKHRRPKPTELSVCCRERSETPRHRNKPSRPVWSRR 155
TLR +SR + P+ R P R R ++ R RS RHR++ P R
Sbjct: 41 TLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRS 100
Query: 154 SPHHFH 137
H H
Sbjct: 101 HRHRSH 106
>AL513218-9|CAI12289.1| 312|Homo sapiens PRP38 pre-mRNA processing
factor 38 (yeast) domain containing A protein.
Length = 312
Score = 33.1 bits (72), Expect = 0.83
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = -2
Query: 334 TLRAVQSREQGPQDHHRGPAPRHSEKHRRPKPTELSVCCRERSETPRHRNKPSRPVWSRR 155
TLR +SR + P+ R P R R ++ R RS RHR++ P R
Sbjct: 228 TLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRS 287
Query: 154 SPHHFH 137
H H
Sbjct: 288 HRHRSH 293
>AK092038-1|BAC03796.1| 312|Homo sapiens protein ( Homo sapiens
cDNA FLJ34719 fis, clone MESAN2005689, weakly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 2. ).
Length = 312
Score = 33.1 bits (72), Expect = 0.83
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = -2
Query: 334 TLRAVQSREQGPQDHHRGPAPRHSEKHRRPKPTELSVCCRERSETPRHRNKPSRPVWSRR 155
TLR +SR + P+ R P R R ++ R RS RHR++ P R
Sbjct: 228 TLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRS 287
Query: 154 SPHHFH 137
H H
Sbjct: 288 HRHRSH 293
>AK027842-1|BAB55405.1| 236|Homo sapiens protein ( Homo sapiens
cDNA FLJ14936 fis, clone PLACE1010194, weakly similar to
SPLICING FACTOR, ARGININE/SERINE-RICH 2. ).
Length = 236
Score = 33.1 bits (72), Expect = 0.83
Identities = 20/66 (30%), Positives = 27/66 (40%)
Frame = -2
Query: 334 TLRAVQSREQGPQDHHRGPAPRHSEKHRRPKPTELSVCCRERSETPRHRNKPSRPVWSRR 155
TLR +SR + P+ R P R R ++ R RS RHR++ P R
Sbjct: 152 TLRYRRSRSRSPRRRSRSPKRRSPSPRRERHRSKSPRRHRSRSRDRRHRSRSKSPGHHRS 211
Query: 154 SPHHFH 137
H H
Sbjct: 212 HRHRSH 217
>AL592424-4|CAI16377.1| 962|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6C
protein.
Length = 962
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 269 PGRRASVVVLRSLLTALHRPEGDRRGCEPRYP 364
PG+ V L LL LH P+ R+G EP P
Sbjct: 790 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 821
>AL592424-3|CAI16378.1| 930|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6C
protein.
Length = 930
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 269 PGRRASVVVLRSLLTALHRPEGDRRGCEPRYP 364
PG+ V L LL LH P+ R+G EP P
Sbjct: 758 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 789
>AL592424-2|CAI16376.1| 922|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6C
protein.
Length = 922
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 269 PGRRASVVVLRSLLTALHRPEGDRRGCEPRYP 364
PG+ V L LL LH P+ R+G EP P
Sbjct: 750 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 781
>AL122064-1|CAB59243.1| 294|Homo sapiens hypothetical protein
protein.
Length = 294
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 269 PGRRASVVVLRSLLTALHRPEGDRRGCEPRYP 364
PG+ V L LL LH P+ R+G EP P
Sbjct: 122 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 153
>AF339154-1|AAL72100.1| 962|Homo sapiens semaphorin Y protein.
Length = 962
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 269 PGRRASVVVLRSLLTALHRPEGDRRGCEPRYP 364
PG+ V L LL LH P+ R+G EP P
Sbjct: 790 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 821
>AF339153-1|AAL72099.1| 922|Homo sapiens semaphorin Y short isoform
2 protein.
Length = 922
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 269 PGRRASVVVLRSLLTALHRPEGDRRGCEPRYP 364
PG+ V L LL LH P+ R+G EP P
Sbjct: 750 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 781
>AF339152-1|AAL72098.1| 930|Homo sapiens semaphorin Y short isoform
1 protein.
Length = 930
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 269 PGRRASVVVLRSLLTALHRPEGDRRGCEPRYP 364
PG+ V L LL LH P+ R+G EP P
Sbjct: 758 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 789
>AF055020-1|AAC09365.1| 446|Homo sapiens unknown protein.
Length = 446
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 269 PGRRASVVVLRSLLTALHRPEGDRRGCEPRYP 364
PG+ V L LL LH P+ R+G EP P
Sbjct: 274 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 305
>AB058772-1|BAB47498.1| 935|Homo sapiens KIAA1869 protein protein.
Length = 935
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 269 PGRRASVVVLRSLLTALHRPEGDRRGCEPRYP 364
PG+ V L LL LH P+ R+G EP P
Sbjct: 763 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 794
>AB022434-1|BAB20670.1| 930|Homo sapiens semaphorin Y protein.
Length = 930
Score = 32.3 bits (70), Expect = 1.5
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 269 PGRRASVVVLRSLLTALHRPEGDRRGCEPRYP 364
PG+ V L LL LH P+ R+G EP P
Sbjct: 758 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 789
>AY681966-1|AAV87216.1| 2069|Homo sapiens citron protein.
Length = 2069
Score = 31.1 bits (67), Expect = 3.4
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = -2
Query: 313 REQGPQDHHRGPAPRHSEKHRRPKPTELSVCCRERSETPRHRNKPSRPVWSRRSPHHF 140
+E G + HHRGP+ S ++R PT + + +P PS P +PH +
Sbjct: 1946 KESGTE-HHRGPSTSRSSPNKRGPPTYNEHITKRVASSPAPPEGPSHP-REPSTPHRY 2001
>AY257469-1|AAP13528.1| 2027|Homo sapiens rho/rac-interacting citron
kinase protein.
Length = 2027
Score = 31.1 bits (67), Expect = 3.4
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = -2
Query: 313 REQGPQDHHRGPAPRHSEKHRRPKPTELSVCCRERSETPRHRNKPSRPVWSRRSPHHF 140
+E G + HHRGP+ S ++R PT + + +P PS P +PH +
Sbjct: 1904 KESGTE-HHRGPSTSRSSPNKRGPPTYNEHITKRVASSPAPPEGPSHP-REPSTPHRY 1959
>AC002563-2|AAB71327.1| 1286|Homo sapiens WUGSC:H_127H14.1 protein.
Length = 1286
Score = 31.1 bits (67), Expect = 3.4
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = -2
Query: 313 REQGPQDHHRGPAPRHSEKHRRPKPTELSVCCRERSETPRHRNKPSRPVWSRRSPHHF 140
+E G + HHRGP+ S ++R PT + + +P PS P +PH +
Sbjct: 1163 KESGTE-HHRGPSTSRSSPNKRGPPTYNEHITKRVASSPAPPEGPSHP-REPSTPHRY 1218
>BC093874-1|AAH93874.1| 330|Homo sapiens potassium channel,
subfamily K, member 15 protein.
Length = 330
Score = 29.9 bits (64), Expect = 7.8
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 260 LAVPGRRASVVVLRSLLTALHRPEGDRRGCEPRYPGHPQPR 382
L V G ++VVLR L+ + PE R PR PG P+ R
Sbjct: 232 LTVIGAFLNLVVLRFLVASADWPERAARTPSPRPPGAPESR 272
>AL118522-1|CAC14068.1| 330|Homo sapiens potassium channel,
subfamily K, member 15 protein.
Length = 330
Score = 29.9 bits (64), Expect = 7.8
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 260 LAVPGRRASVVVLRSLLTALHRPEGDRRGCEPRYPGHPQPR 382
L V G ++VVLR L+ + PE R PR PG P+ R
Sbjct: 232 LTVIGAFLNLVVLRFLVASADWPERAARTPSPRPPGAPESR 272
>AK131502-1|BAD18646.1| 183|Homo sapiens protein ( Homo sapiens
cDNA FLJ16710 fis, clone UTERU2021820, weakly similar
to Homo sapiens dipeptidylpeptidase 6 (DPP6). ).
Length = 183
Score = 29.9 bits (64), Expect = 7.8
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = -2
Query: 304 GPQDHHRGPAPRHSEKHRRPKPTELSVCCRERSETP 197
GP HR PAPR +P S+C R TP
Sbjct: 119 GPTRAHRTPAPRFQPPSGSMRPAHTSLCVPVRDITP 154
>AF336342-1|AAK37518.1| 330|Homo sapiens tandem pore domain
potassium channel TASK-5 protein.
Length = 330
Score = 29.9 bits (64), Expect = 7.8
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 260 LAVPGRRASVVVLRSLLTALHRPEGDRRGCEPRYPGHPQPR 382
L V G ++VVLR L+ + PE R PR PG P+ R
Sbjct: 232 LTVIGAFLNLVVLRFLVASADWPERAARPPSPRPPGAPESR 272
>AF294352-1|AAK97093.1| 330|Homo sapiens tandem acid-sensitive
potassium channel TASK5 protein.
Length = 330
Score = 29.9 bits (64), Expect = 7.8
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 260 LAVPGRRASVVVLRSLLTALHRPEGDRRGCEPRYPGHPQPR 382
L V G ++VVLR L+ + PE R PR PG P+ R
Sbjct: 232 LTVIGAFLNLVVLRFLVASADWPERAARTPSPRPPGAPESR 272
>AF294351-1|AAK97092.1| 330|Homo sapiens tandem acid-sensitive
potassium channel TASK5 protein.
Length = 330
Score = 29.9 bits (64), Expect = 7.8
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 260 LAVPGRRASVVVLRSLLTALHRPEGDRRGCEPRYPGHPQPR 382
L V G ++VVLR L+ + PE R PR PG P+ R
Sbjct: 232 LTVIGAFLNLVVLRFLVASADWPERAARTPSPRPPGAPESR 272
>AF294350-1|AAK97091.1| 330|Homo sapiens tandem acid-sensitive
potassium channel TASK5 protein.
Length = 330
Score = 29.9 bits (64), Expect = 7.8
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 260 LAVPGRRASVVVLRSLLTALHRPEGDRRGCEPRYPGHPQPR 382
L V G ++VVLR L+ + PE R PR PG P+ R
Sbjct: 232 LTVIGAFLNLVVLRFLVASADWPERAARPPSPRPPGAPESR 272
>AF257081-1|AAG33127.1| 330|Homo sapiens two pore potassium channel
KT3.3 protein.
Length = 330
Score = 29.9 bits (64), Expect = 7.8
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +2
Query: 260 LAVPGRRASVVVLRSLLTALHRPEGDRRGCEPRYPGHPQPR 382
L V G ++VVLR L+ + PE R PR PG P+ R
Sbjct: 232 LTVIGAFLNLVVLRFLVASADWPERAARPPSPRPPGAPESR 272
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,075,283
Number of Sequences: 237096
Number of extensions: 1724280
Number of successful extensions: 5457
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 4982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5439
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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