Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00596
         (601 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   6.0  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   6.0  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.9  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 127 TLQGEDIVFLATD 165
           T+QG D+  +ATD
Sbjct: 361 TIQGHDLTLIATD 373


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.4 bits (43), Expect = 6.0
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 127 TLQGEDIVFLATD 165
           T+QG D+  +ATD
Sbjct: 361 TIQGHDLTLIATD 373


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +2

Query: 476 WYKCHNIYCLTMFLFTIYVS*NSCI 550
           +Y  H ++C    +FT+++    CI
Sbjct: 261 FYYMHLLFCCAFIIFTMHLLFLLCI 285


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,207
Number of Sequences: 336
Number of extensions: 3158
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)