Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00596
         (601 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02588-1|AAA18901.1|  110|Anopheles gambiae translation initiati...    23   5.7  
AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein p...    23   5.7  

>U02588-1|AAA18901.1|  110|Anopheles gambiae translation initiation
           factor protein.
          Length = 110

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 12/38 (31%), Positives = 18/38 (47%)
 Frame = +1

Query: 25  FRPYSYPCPGASCKWQGGLDQVMPHLMMSHKSITTLQG 138
           F P++    GA    Q GL  +        K++TT+QG
Sbjct: 9   FDPFADAIKGADYDVQDGLVHIRIQQRNGRKTLTTVQG 46


>AB090818-1|BAC57911.1|  285|Anopheles gambiae gag-like protein
           protein.
          Length = 285

 Score = 23.4 bits (48), Expect = 5.7
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +3

Query: 135 RRRYSVLSYGHQPARCGG 188
           R+ Y    YGH  ARC G
Sbjct: 212 RQCYRCYEYGHTAARCHG 229


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 660,573
Number of Sequences: 2352
Number of extensions: 13524
Number of successful extensions: 13
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 58029966
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)