Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00596
         (601 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U89792-1|AAB94380.1|  339|Caenorhabditis elegans seven-in-absent...   160   6e-40
AC024759-5|AAK68432.1|  419|Caenorhabditis elegans Hypothetical ...   160   6e-40
U97404-2|AAB93309.1|  795|Caenorhabditis elegans Acid-sensing/am...    28   5.9  
Z73103-13|CAA97430.1|  340|Caenorhabditis elegans Hypothetical p...    27   7.7  
Z68341-6|CAA92769.1|  340|Caenorhabditis elegans Hypothetical pr...    27   7.7  
X76113-1|CAA53719.1|  340|Caenorhabditis elegans phosphate carri...    27   7.7  

>U89792-1|AAB94380.1|  339|Caenorhabditis elegans seven-in-absentia 
           protein homologue-1 protein.
          Length = 339

 Score =  160 bits (389), Expect = 6e-40
 Identities = 71/83 (85%), Positives = 74/83 (89%)
 Frame = +1

Query: 4   EHEEACEFRPYSYPCPGASCKWQGGLDQVMPHLMMSHKSITTLQGEDIVFLATDINLPGA 183
           EHEE CEFRPY  PCPGASCKWQGGL  VM HL   HKSITTLQGEDIVFLATDINLPGA
Sbjct: 165 EHEELCEFRPYCCPCPGASCKWQGGLSDVMEHLKKIHKSITTLQGEDIVFLATDINLPGA 224

Query: 184 VDWVMMQSCFNHHFMLVLEKQEK 252
           VDWVMMQSCF+++FMLVLEKQEK
Sbjct: 225 VDWVMMQSCFDYNFMLVLEKQEK 247



 Score =  129 bits (312), Expect = 1e-30
 Identities = 67/107 (62%), Positives = 79/107 (73%), Gaps = 7/107 (6%)
 Frame = +3

Query: 198 DAVMLQSSFYVSF----RKTRKIDGHQ---QFFAIVQLIGSRKEAENFAYRLELNGHRRR 356
           D VM+QS F  +F     K  K D  Q    F+A+VQLIGS+KEA+NF YRLEL+  RRR
Sbjct: 226 DWVMMQSCFDYNFMLVLEKQEKYDPAQPTQMFYAVVQLIGSKKEADNFVYRLELSASRRR 285

Query: 357 LTWEAMPRSIHEGVSSAIMNSDCLGFDTSLAQLFADNGNLGINVTIS 497
           ++WEA PRSIHEGV  AI  SDCL FD++ AQLFA+NGNLGINVTIS
Sbjct: 286 MSWEATPRSIHEGVVVAIQQSDCLAFDSNAAQLFAENGNLGINVTIS 332


>AC024759-5|AAK68432.1|  419|Caenorhabditis elegans Hypothetical
           protein Y37E11AR.2 protein.
          Length = 419

 Score =  160 bits (389), Expect = 6e-40
 Identities = 71/83 (85%), Positives = 74/83 (89%)
 Frame = +1

Query: 4   EHEEACEFRPYSYPCPGASCKWQGGLDQVMPHLMMSHKSITTLQGEDIVFLATDINLPGA 183
           EHEE CEFRPY  PCPGASCKWQGGL  VM HL   HKSITTLQGEDIVFLATDINLPGA
Sbjct: 231 EHEELCEFRPYCCPCPGASCKWQGGLSDVMEHLKKIHKSITTLQGEDIVFLATDINLPGA 290

Query: 184 VDWVMMQSCFNHHFMLVLEKQEK 252
           VDWVMMQSCF+++FMLVLEKQEK
Sbjct: 291 VDWVMMQSCFDYNFMLVLEKQEK 313



 Score =  129 bits (312), Expect = 1e-30
 Identities = 67/107 (62%), Positives = 79/107 (73%), Gaps = 7/107 (6%)
 Frame = +3

Query: 198 DAVMLQSSFYVSF----RKTRKIDGHQ---QFFAIVQLIGSRKEAENFAYRLELNGHRRR 356
           D VM+QS F  +F     K  K D  Q    F+A+VQLIGS+KEA+NF YRLEL+  RRR
Sbjct: 292 DWVMMQSCFDYNFMLVLEKQEKYDPAQPTQMFYAVVQLIGSKKEADNFVYRLELSASRRR 351

Query: 357 LTWEAMPRSIHEGVSSAIMNSDCLGFDTSLAQLFADNGNLGINVTIS 497
           ++WEA PRSIHEGV  AI  SDCL FD++ AQLFA+NGNLGINVTIS
Sbjct: 352 MSWEATPRSIHEGVVVAIQQSDCLAFDSNAAQLFAENGNLGINVTIS 398


>U97404-2|AAB93309.1|  795|Caenorhabditis elegans
           Acid-sensing/amiloride-sensitiveion channel family
           protein 1 protein.
          Length = 795

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = -1

Query: 568 LRNYESNTRVLAHINCKKKHG*AIDIVTFIPRLPLSANN 452
           L  YE    V +H NC K+HG    + T +P + L  +N
Sbjct: 353 LSRYEGLLAVYSHCNCTKQHG---CVSTSVPDMDLENSN 388


>Z73103-13|CAA97430.1|  340|Caenorhabditis elegans Hypothetical
           protein F01G4.6a protein.
          Length = 340

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -1

Query: 472 LPLSANNCASDVSNPRQSEF 413
           LP+ + NCAS VS P Q EF
Sbjct: 18  LPVRSGNCASAVSAPGQVEF 37


>Z68341-6|CAA92769.1|  340|Caenorhabditis elegans Hypothetical
           protein F01G4.6a protein.
          Length = 340

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -1

Query: 472 LPLSANNCASDVSNPRQSEF 413
           LP+ + NCAS VS P Q EF
Sbjct: 18  LPVRSGNCASAVSAPGQVEF 37


>X76113-1|CAA53719.1|  340|Caenorhabditis elegans phosphate carrier
           protein protein.
          Length = 340

 Score = 27.5 bits (58), Expect = 7.7
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = -1

Query: 472 LPLSANNCASDVSNPRQSEF 413
           LP+ + NCAS VS P Q EF
Sbjct: 18  LPVRSGNCASAVSAPGQVEF 37


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,346,118
Number of Sequences: 27780
Number of extensions: 291166
Number of successful extensions: 604
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1279376318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)