Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00595X
         (354 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    24   0.40 
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    21   4.9  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.2 bits (50), Expect = 0.40
 Identities = 11/30 (36%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
 Frame = +1

Query: 133 CEFEGEECKKG-NLLGVCTNIRECQSALND 219
           CEF+G +C  G N    CT    C     D
Sbjct: 511 CEFDGNDCSLGINPWANCTASTRCWEVFMD 540


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 20.6 bits (41), Expect = 4.9
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -3

Query: 205 IDIPLYSCRLLINYLFYIL 149
           +D  L+S RLL+NY+  +L
Sbjct: 43  VDRILHSKRLLLNYINCLL 61


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,315
Number of Sequences: 336
Number of extensions: 1211
Number of successful extensions: 2
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7087595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)