Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00595X
         (354 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF106577-2|AAC78194.1|  180|Caenorhabditis elegans Hypothetical ...    30   0.53 
U80840-8|AAB37927.1|  235|Caenorhabditis elegans Hypothetical pr...    27   5.0  

>AF106577-2|AAC78194.1|  180|Caenorhabditis elegans Hypothetical
           protein F46F5.15 protein.
          Length = 180

 Score = 29.9 bits (64), Expect = 0.53
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +1

Query: 91  IYLLLMSMLFVCVHCEFEGEECKKGNLLGVCTNIRE 198
           IY++L+ + FV V   +E  E +K +LL    ++RE
Sbjct: 3   IYIVLLGLFFVSVEASYEVSETEKNDLLMRYNHLRE 38


>U80840-8|AAB37927.1|  235|Caenorhabditis elegans Hypothetical
           protein F08D12.4 protein.
          Length = 235

 Score = 26.6 bits (56), Expect = 5.0
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +1

Query: 58  LTLNSLKMDQSIYLLLMSMLFVCVHCEFEGEECKKGNLLGVCTN 189
           LTL   + ++  YLL     F  V C ++G E   G + G+ +N
Sbjct: 90  LTLGINRRERDGYLLQFDQSFSYVACRWDGSEFIDGRISGLESN 133


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,630,853
Number of Sequences: 27780
Number of extensions: 107204
Number of successful extensions: 213
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 213
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 471339352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)