Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00595X
         (354 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At4g36100.1 68417.m05138 expressed protein contains Pfam domain,...    27   2.7  
At4g34080.1 68417.m04835 expressed protein contains Pfam profile...    27   2.7  
At2g45260.1 68415.m05634 expressed protein contains Pfam profile...    27   2.7  
At1g77280.1 68414.m09000 protein kinase family protein contains ...    27   3.6  

>At4g36100.1 68417.m05138 expressed protein contains Pfam domain,
           PF04859: Plant protein of unknown function (DUF641)
          Length = 236

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +1

Query: 7   QTRHVPYDPTK*CANNKLTLNSLK 78
           Q+ H PYDP K  A +K+ ++ LK
Sbjct: 34  QSAHTPYDPEKIQAADKVVISELK 57


>At4g34080.1 68417.m04835 expressed protein contains Pfam profile
           PF04859: Plant protein of unknown function (DUF641
          Length = 331

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +1

Query: 7   QTRHVPYDPTK*CANNKLTLNSLK 78
           Q+ H PYDP K  A +K+ ++ LK
Sbjct: 34  QSAHTPYDPEKIQAADKVVISELK 57


>At2g45260.1 68415.m05634 expressed protein contains Pfam profile
           PF04859: Plant protein of unknown function (DUF641
          Length = 425

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +1

Query: 7   QTRHVPYDPTK*CANNKLTLNSLK 78
           Q+ H PYDP K  A +K+ ++ LK
Sbjct: 58  QSAHTPYDPEKIQAADKVVISELK 81


>At1g77280.1 68414.m09000 protein kinase family protein contains
           Pfam domain, PF00069: Protein kinase domain
          Length = 794

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 14/30 (46%), Positives = 17/30 (56%)
 Frame = -1

Query: 330 DALLWRGEPVN*SSYQSST**DPRCQRINL 241
           D L W  + VN SS +S    D +CQR NL
Sbjct: 723 DTLEWAMQQVNSSSEESEMLKDEQCQRSNL 752


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,086,187
Number of Sequences: 28952
Number of extensions: 95245
Number of successful extensions: 205
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 205
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 449370720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)