Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00593
         (711 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    24   1.1  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    24   1.4  
DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.      21   9.9  

>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 18/67 (26%), Positives = 28/67 (41%)
 Frame = +2

Query: 185 DSGFSEVWTYSRLFIIGEAINFV*TPMGVRQNPWTPTKRRGPIAAEASSPGPAVVSLPSL 364
           ++ F  V  Y    I    IN+     G R+N  +  KR+  ++    SP     + PS 
Sbjct: 172 ETQFIAVTAYQNEKITKLKINYNPFAKGFRENGKSSAKRKQLVSEHPDSPNSKKSATPS- 230

Query: 365 IGKPPPE 385
              PPP+
Sbjct: 231 ---PPPQ 234


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -3

Query: 655 AVLSVVYVPGSGINPLASENFP 590
           +++S+ Y+PG  +N + S N P
Sbjct: 32  SLISLSYLPGPPVNDIISGNIP 53


>DQ138189-1|ABA03053.1|  162|Tribolium castaneum bursicon protein.
          Length = 162

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -1

Query: 432 SSFCPKVKAGALGFL 388
           S FCPK K G   F+
Sbjct: 101 SLFCPKAKPGERKFI 115


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,901
Number of Sequences: 336
Number of extensions: 3667
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)