SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00593
         (711 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0945 + 9351915-9351929,9352221-9352386,9352903-9353024,935...    32   0.52 
11_06_0610 - 25449085-25453284                                         31   0.90 
10_08_1008 - 22222051-22222377,22222479-22222640,22223179-222233...    31   1.2  
05_01_0361 - 2824728-2826043,2826288-2826507,2827616-2827702,282...    31   1.2  
03_06_0074 - 31476094-31476215,31477803-31478238,31478438-314784...    30   1.6  
05_02_0081 + 6432957-6433289,6433367-6433882,6434283-6434570           30   2.1  
03_05_0576 + 25765137-25766420                                         30   2.1  
01_06_1808 - 40023533-40023966,40024078-40024204                       30   2.1  
09_01_0180 + 2632507-2634870                                           29   2.8  
02_05_0856 - 32272757-32273494,32273578-32273866,32273961-322743...    29   2.8  
12_02_0299 - 17051570-17052474,17053542-17053755                       29   3.6  
11_01_0066 - 536281-537196,537397-537452                               29   3.6  
10_08_0802 + 20680685-20681059,20681218-20681353,20682047-206821...    29   3.6  
05_05_0017 + 21546434-21546841                                         29   3.6  
04_04_0293 - 24189344-24189350,24189804-24190026,24190411-241905...    29   3.6  
03_06_0145 - 31973924-31975837                                         29   3.6  
08_01_0080 + 566509-566746,566904-567151,567347-567532,567639-56...    29   4.8  
01_07_0078 - 40923115-40924016,40924341-40924416,40924686-40924718     29   4.8  
11_02_0005 - 7264736-7264753,7265086-7265188,7265487-7265539,726...    28   6.4  
10_02_0042 + 4493692-4494019,4494428-4494441                           28   6.4  
09_03_0110 + 12432562-12432801,12432811-12433419                       28   6.4  
07_03_0520 + 19014731-19015795                                         28   6.4  
07_03_0115 - 13574601-13574645,13574710-13574781,13575990-13576469     28   6.4  
06_03_1067 - 27326167-27326295,27326572-27326656,27326993-273270...    28   6.4  
01_06_1518 + 37925609-37925871,37925954-37926554                       28   6.4  
01_05_0706 + 24457148-24458031,24458621-24458822,24458896-244590...    28   6.4  
12_01_0030 + 262452-263210,263332-263575,263867-264165                 28   8.4  
11_06_0543 + 24792110-24792229,24792316-24792521,24793770-247944...    28   8.4  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    28   8.4  
08_01_0594 + 5248020-5248137,5248330-5248886                           28   8.4  
02_05_0868 + 32342967-32343915,32344389-32344447                       28   8.4  
01_06_0922 - 33022709-33023545                                         28   8.4  
01_03_0146 + 13120727-13121037,13121063-13121912,13122854-131235...    28   8.4  

>12_01_0945 +
           9351915-9351929,9352221-9352386,9352903-9353024,
           9353098-9353214,9356997-9357077,9357204-9357272,
           9357727-9357790,9357988-9358067,9358164-9358247,
           9358418-9358502,9359658-9359743,9359924-9360045,
           9360841-9360901,9360981-9361166,9363622-9363723,
           9363803-9363844,9363949-9364086
          Length = 539

 Score = 31.9 bits (69), Expect = 0.52
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = +2

Query: 257 TPMGVRQNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAP 406
           T  GV Q+  +  K   P+A E S   PA  S+ ++ GK PP    P+ P
Sbjct: 58  TEGGVLQSNESSAKVDEPVATENSDAAPAEASVDAVNGKIPPTKLIPQHP 107


>11_06_0610 - 25449085-25453284
          Length = 1399

 Score = 31.1 bits (67), Expect = 0.90
 Identities = 18/53 (33%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
 Frame = +2

Query: 257  TPMGVRQNPWTPTKRRGPIAAEASSPGPAVVSLPS--LIGKPPPESRKPRAPA 409
            +P  V +    PT++  P  A  S P P V  LP    +  PPP  + P  PA
Sbjct: 1104 SPPSVPKASSPPTEKSLPPPATVSLPPPTVKPLPPPVPVSSPPPPEKSPPPPA 1156



 Score = 29.9 bits (64), Expect = 2.1
 Identities = 15/42 (35%), Positives = 17/42 (40%)
 Frame = +2

Query: 281 PWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAP 406
           P  P     P  + A    PA  S P+  G PPPE   P  P
Sbjct: 430 PLIPVPVGPPEKSPAYEEPPAAPSTPTSHGPPPPEEESPEEP 471


>10_08_1008 -
           22222051-22222377,22222479-22222640,22223179-22223310,
           22224556-22224608,22224713-22225256
          Length = 405

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 19/59 (32%), Positives = 24/59 (40%)
 Frame = +2

Query: 332 PGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKAP 508
           P PA  + P      PP S+ P  P   F Q+  P A  A     P   + + M  KAP
Sbjct: 14  PAPAAAAPPPAAAPAPPPSQPP-PPPLPFAQQAPPPA--ANPAAAPMRLSFDQMAGKAP 69


>05_01_0361 -
           2824728-2826043,2826288-2826507,2827616-2827702,
           2827726-2827980,2828704-2828733
          Length = 635

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 6/46 (13%)
 Frame = +2

Query: 290 PTKRRGPIAAEASSPGP------AVVSLPSLIGKPPPESRKPRAPA 409
           P  R  P  + A+SP P      A +++P +    PPE R PRA A
Sbjct: 499 PVHRNSPQISVATSPSPIRRGDPAHINIPQISVATPPECRSPRAQA 544


>03_06_0074 -
           31476094-31476215,31477803-31478238,31478438-31478485,
           31478569-31479018,31479567-31479681,31480052-31480905
          Length = 674

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 21/51 (41%), Positives = 22/51 (43%)
 Frame = +2

Query: 350 SLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAK 502
           S PS    PP  SRKP  P     QK   L  I + GP PA   T   T K
Sbjct: 28  SSPSPSPSPPSSSRKPPLPPRRSPQKRPGLPTIPENGP-PAGMATATATPK 77


>05_02_0081 + 6432957-6433289,6433367-6433882,6434283-6434570
          Length = 378

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +2

Query: 311 IAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAF 412
           +  +  SP P   +  + +  PPP  R PRAPAF
Sbjct: 214 VVDQFGSPPPPRHTDTATVTTPPPTKRSPRAPAF 247


>03_05_0576 + 25765137-25766420
          Length = 427

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 16/47 (34%), Positives = 19/47 (40%)
 Frame = +2

Query: 296 KRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDP 436
           KR GP A  + SP P+    P     PPP    P A A +      P
Sbjct: 61  KRGGPEAPPSPSPSPSPSPPPQPSSPPPPPPSPPPAAAVSVSPPTQP 107


>01_06_1808 - 40023533-40023966,40024078-40024204
          Length = 186

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
 Frame = +2

Query: 299 RRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQ-KLDPLANIAKAGPGPAS 475
           R  P ++ AS+   +  +LP+    PPP  ++P  PAF+  Q +L   A  A  G   AS
Sbjct: 128 RAAPPSSSASAASTSS-ALPAPAPPPPPSQQQPPLPAFSMRQFELAMAAQAAATGTTTAS 186


>09_01_0180 + 2632507-2634870
          Length = 787

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
 Frame = +2

Query: 290 PTKRRGPIAAEASSPGPAVVSL-PSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPG 466
           PT R  P A  AS+    V  L PSL  +P P+   P  P     Q + P++    + P 
Sbjct: 197 PTSRPSPAALGASA---VVAGLGPSLPARPFPKKPSPPPPPAQQQQSVPPMSKFNPSPPS 253

Query: 467 P 469
           P
Sbjct: 254 P 254


>02_05_0856 -
           32272757-32273494,32273578-32273866,32273961-32274312,
           32275232-32275850
          Length = 665

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
 Frame = +2

Query: 278 NPWTPTKRRGPIAAEASSPG----PAVVSLPSLI--GKPPPESRKPRAP 406
           +PW P+ ++       SS G    P  +S P L     PPP SR+P  P
Sbjct: 68  HPWPPSSQQRTTTTTVSSHGLFRLPTALSPPVLTRGSIPPPPSRRPHPP 116


>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 19/64 (29%), Positives = 22/64 (34%)
 Frame = +2

Query: 278 NPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKA 457
           +P  P     P       P P    LPS    PPP    P  P  +F     PLA +   
Sbjct: 288 SPPPPPPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPPPPPPPPSFPWPFPPLAPLFPP 347

Query: 458 GPGP 469
            P P
Sbjct: 348 YPSP 351


>11_01_0066 - 536281-537196,537397-537452
          Length = 323

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 18/74 (24%), Positives = 22/74 (29%)
 Frame = +2

Query: 290 PTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGP 469
           P     P  A    P P     P  I  PPP    P  P+        P     +A P P
Sbjct: 195 PAPPTPPTIARPPRPLPPASPPPPSIATPPPSPASPPPPSTATPPPPSPTPTTTRASPTP 254

Query: 470 ASYNTEGMTAKAPI 511
               T  +    P+
Sbjct: 255 PPIPTATVRPPPPL 268


>10_08_0802 +
           20680685-20681059,20681218-20681353,20682047-20682180,
           20682722-20682827,20683227-20683312,20683648-20683836,
           20684349-20684522,20684638-20684751,20684887-20685141
          Length = 522

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
 Frame = +2

Query: 374 PPPESRKPRAPAFTF-GQKLDPLANIAKAGPGPA 472
           PPP+   PR P+FT    +    ++ A A P PA
Sbjct: 27  PPPQPHHPRRPSFTLNAHQAAASSSAASAAPAPA 60


>05_05_0017 + 21546434-21546841
          Length = 135

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 2/69 (2%)
 Frame = +2

Query: 314 AAEASSPGPAVVSLPSLI--GKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTE 487
           A++A +P PA +S P L   G+P P      A A T      P A      P  A   + 
Sbjct: 50  ASDAPAPSPAPLSTPELCRPGEPVPAPSSSPAGATTTPAPAAPAATAPAPSP-EADGKSS 108

Query: 488 GMTAKAPIL 514
           G  A  P++
Sbjct: 109 GAAAAPPLM 117


>04_04_0293 -
           24189344-24189350,24189804-24190026,24190411-24190529,
           24191331-24191578
          Length = 198

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
 Frame = +2

Query: 323 ASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANI-AKAGPGPASYNTEGMTA 499
           + SP       P+  G P P++  P  PA        P     A AGP P +  T   ++
Sbjct: 2   SQSPAAPAPKAPAAAG-PAPKATAPAGPARKAPAAAGPAPKATAPAGPAPKATATAAPSS 60

Query: 500 KAP 508
           KAP
Sbjct: 61  KAP 63


>03_06_0145 - 31973924-31975837
          Length = 637

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 16/48 (33%), Positives = 22/48 (45%)
 Frame = +2

Query: 326 SSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGP 469
           S P PAVV+       PPP  R  RAP   +  +     + +K+G  P
Sbjct: 391 SPPTPAVVAASRATNPPPPRRRTSRAPRLPWRYRPVIDEHKSKSGDAP 438


>08_01_0080 +
           566509-566746,566904-567151,567347-567532,567639-567734,
           567836-567907,567990-568106,570531-571676
          Length = 700

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = +2

Query: 266 GVRQNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPP 382
           GV Q+  +  K   P+A E S   PA  S+ ++ GK PP
Sbjct: 80  GVVQSNESSAKVDEPVATENSDAAPAEASVDAVNGKVPP 118


>01_07_0078 - 40923115-40924016,40924341-40924416,40924686-40924718
          Length = 336

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 14/53 (26%), Positives = 25/53 (47%)
 Frame = +2

Query: 233 GEAINFV*TPMGVRQNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESR 391
           G  +N++  P  V    +   +     A  A+ P PA +S+P  + +P P S+
Sbjct: 209 GSHVNYMPQPQPVPVMSYNVARPTASAAYYAAPPAPAPMSMPMPMARPGPSSQ 261


>11_02_0005 -
           7264736-7264753,7265086-7265188,7265487-7265539,
           7265791-7265880,7266093-7266217,7266528-7266753
          Length = 204

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 14/31 (45%), Positives = 15/31 (48%)
 Frame = +2

Query: 314 AAEASSPGPAVVSLPSLIGKPPPESRKPRAP 406
           AA   +PG A VS P    KPPP    P  P
Sbjct: 25  AAWDMNPGAATVSAPKPKAKPPPPPSPPPLP 55


>10_02_0042 + 4493692-4494019,4494428-4494441
          Length = 113

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 22/77 (28%), Positives = 34/77 (44%)
 Frame = +2

Query: 275 QNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAK 454
           + P    K+RG  AA AS       S PS    P P   + RAP  +  +   PLA  A+
Sbjct: 16  KKPKAKPKQRGGAAA-ASGEERVAASAPSPTAPPSPPRCRRRAP-LSPPRGHPPLAPFAE 73

Query: 455 AGPGPASYNTEGMTAKA 505
              G +++ +  ++  A
Sbjct: 74  IASGSSAFGSRAVSPPA 90


>09_03_0110 + 12432562-12432801,12432811-12433419
          Length = 282

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +2

Query: 284 WTPTKRRGPIAAEASSPGPAVVS 352
           W P  RR P  AE S  GPA V+
Sbjct: 212 WRPCSRRRPAVAEPSRLGPAAVA 234


>07_03_0520 + 19014731-19015795
          Length = 354

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
 Frame = -1

Query: 504 ALAVIPSVL*EAGPGPAFAILARGSSFCPKVKAGALGFLDSG-GGLP 367
           A +V P+ L   G  PA     RG+   PKV+ G  G +    GG+P
Sbjct: 83  ACSVAPTKLQAEGAAPAAPPRMRGAVVAPKVRGGGGGAVTKARGGVP 129


>07_03_0115 - 13574601-13574645,13574710-13574781,13575990-13576469
          Length = 198

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 18/43 (41%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
 Frame = -1

Query: 396 GFLDSGGGLPIREGRDTTAGPG-LEASAAIGPLRFVGVHGFWR 271
           G    GGG P REG   TA  G     AA      V V G WR
Sbjct: 99  GVAGDGGGWPAREGHPATAESGAARRGAAEDSTGEVAVVGGWR 141


>06_03_1067 - 27326167-27326295,27326572-27326656,27326993-27327033,
            27327274-27327333,27327843-27327962,27328842-27329114,
            27329186-27329257,27329798-27329860,27329957-27330139,
            27330544-27330660,27330734-27332683,27332770-27332907,
            27333003-27333284,27334650-27335522
          Length = 1461

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
 Frame = +2

Query: 275  QNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPP----ESRKPRAPAFTFG 421
            ++P  P+ RR  I      P P V+S+P +   PPP    ESRK   P    G
Sbjct: 960  RSPCVPSNRRD-IPLVRRPPSPVVLSVPRVPRPPPPSPVGESRKRGFPIVRSG 1011


>01_06_1518 + 37925609-37925871,37925954-37926554
          Length = 287

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 15/65 (23%), Positives = 26/65 (40%)
 Frame = +2

Query: 314 AAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGM 493
           AA   +   +  + PSL   PPP+  +   P           A  A + P    +++ G 
Sbjct: 137 AASGLTTTASTAAFPSLAPAPPPQQHRLHNPVHAAAPSNASFARSAASPPSEDGHSSSGG 196

Query: 494 TAKAP 508
           ++ AP
Sbjct: 197 SSDAP 201


>01_05_0706 +
           24457148-24458031,24458621-24458822,24458896-24459080,
           24459170-24459503,24459614-24459818,24460022-24460128,
           24460220-24460381
          Length = 692

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 15/40 (37%), Positives = 22/40 (55%)
 Frame = -1

Query: 417 KVKAGALGFLDSGGGLPIREGRDTTAGPGLEASAAIGPLR 298
           +V+A AL  LD GGG  +R+  D  A    +  + + PLR
Sbjct: 8   RVRAAALA-LDGGGGGAVRDKPDAKADVFADLGSPVSPLR 46


>12_01_0030 + 262452-263210,263332-263575,263867-264165
          Length = 433

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 323 ASSPGPAVVSLPSLIGKPPPESRKP 397
           A SP P+  S PS +  PPP +  P
Sbjct: 79  AMSPAPSTASSPSSVPSPPPVTHYP 103


>11_06_0543 +
           24792110-24792229,24792316-24792521,24793770-24794462,
           24794538-24794717,24794793-24795084,24795166-24795375
          Length = 566

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = +2

Query: 260 PMGVRQNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRK 394
           P+ +   P  P K   P  A+  SP P   +  SL    PP+ R+
Sbjct: 107 PIKMPTPPPLPHKSPSPPLAQRKSPSPQEAAHQSLASSDPPKKRR 151


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 27/87 (31%), Positives = 31/87 (35%), Gaps = 3/87 (3%)
 Frame = +2

Query: 257 TPMGVRQNPWTPTKRRGPIAAEAS-SPGPAVVSLPSLIGKPPPESRK--PRAPAFTFGQK 427
           TP G   +   P     P    A+ + GP V S P     PPP +R   P APA      
Sbjct: 678 TPTGAATSSKGPPPPPPPPLPPANRTNGPGVPSAPPPPPPPPPANRSNGPSAPAPPLPPP 737

Query: 428 LDPLANIAKAGPGPASYNTEGMTAKAP 508
           L   AN       P      G  A AP
Sbjct: 738 LPAAANKRNPPAPPPPPLMTGKKAPAP 764


>08_01_0594 + 5248020-5248137,5248330-5248886
          Length = 224

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
 Frame = +2

Query: 260 PMGVRQNPWTPTKRRGPIAAEA-SSPGPAVVSLPSLI-GKPPPESRKPRAPAFTFGQ 424
           P+G+    + P   +  +A  A SS  P V+++ + + G  PP S +  A AF  G+
Sbjct: 152 PVGLIHFQFNPNPHQPAVAIAALSSQNPGVITIANAVFGSKPPISDEVLAKAFQVGK 208


>02_05_0868 + 32342967-32343915,32344389-32344447
          Length = 335

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 14/42 (33%), Positives = 21/42 (50%)
 Frame = +2

Query: 281 PWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAP 406
           P    ++ GP  A + +P P    +PS    PPP +R+P  P
Sbjct: 106 PGRAFRQPGPAPAPSPAPAPPRRRMPS----PPPVARRPSTP 143


>01_06_0922 - 33022709-33023545
          Length = 278

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +2

Query: 269 VRQNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAP 406
           VR++P +P  +R P    A+SP P++   P +  +P P  R   AP
Sbjct: 179 VRRSP-SPAAKRTPEQRRAASPAPSLQRKPPVPVRPSPR-RVQEAP 222


>01_03_0146 +
           13120727-13121037,13121063-13121912,13122854-13123561,
           13123596-13123943
          Length = 738

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +2

Query: 287 TPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPE 385
           +PT+RR P+   +SSP    VS+     +PP E
Sbjct: 106 SPTRRRPPVNMASSSPSSGDVSVDGQKVRPPLE 138


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,568,114
Number of Sequences: 37544
Number of extensions: 440671
Number of successful extensions: 1726
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 1575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1718
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -