Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00593
(711 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical p... 33 0.27
U41007-13|AAA82271.2| 307|Caenorhabditis elegans (s. pombe chro... 31 1.1
AL023838-4|CAA19504.1| 218|Caenorhabditis elegans Hypothetical ... 31 1.1
AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical ... 31 1.1
AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical ... 31 1.1
Z70756-12|CAA94796.2| 180|Caenorhabditis elegans Hypothetical p... 30 1.4
L23648-9|AAK95877.1| 466|Caenorhabditis elegans Prion-like-(q/n... 30 1.4
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 29 3.3
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 3.3
Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical pr... 29 4.3
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 29 4.3
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical pr... 28 5.7
Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical p... 28 5.7
AL033510-6|CAA22062.1| 343|Caenorhabditis elegans Hypothetical ... 28 5.7
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 28 5.7
AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans hom... 28 5.7
Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical p... 28 7.6
Z36719-4|CAA85315.2| 513|Caenorhabditis elegans Hypothetical pr... 28 7.6
>Z98866-26|CAM33505.1| 559|Caenorhabditis elegans Hypothetical
protein Y49E10.29 protein.
Length = 559
Score = 32.7 bits (71), Expect = 0.27
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = +2
Query: 269 VRQNPWTPTKRRGPIAAEASS--PGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLA 442
VRQNP P ++ P + +A+ P PA P + PP + P PA QK P+
Sbjct: 377 VRQNPPMPAVQQAPSSQQATQAPPKPAPQQAPPVQQNPPKPTPSPAPPA----QKAQPVT 432
Query: 443 NIAKAGP 463
+ P
Sbjct: 433 QQQASAP 439
>U41007-13|AAA82271.2| 307|Caenorhabditis elegans (s. pombe
chromosome segregationprotein) homolog protein 1
protein.
Length = 307
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +2
Query: 290 PTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPA 409
PT RR P+ SS PA S P+ P P +KP PA
Sbjct: 216 PTNRRAPMLIAPSST-PAGPSKPTARKPPTPRFKKPSTPA 254
>AL023838-4|CAA19504.1| 218|Caenorhabditis elegans Hypothetical
protein Y43C5A.4 protein.
Length = 218
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +2
Query: 308 PIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAF 412
P+ + P PAV + KPPPE +P+ P F
Sbjct: 158 PVEPSPAPPVPAVPAAVEQEWKPPPEFERPKHPGF 192
>AF067211-1|AAC16986.1| 455|Caenorhabditis elegans Hypothetical
protein B0205.10 protein.
Length = 455
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +2
Query: 260 PMGVRQNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPR--APAFTFGQKLD 433
P V+Q P P P A + PGPA V +P P + +P APA Q+
Sbjct: 62 PASVQQQPEAPAP--APTAPDVQQPGPAPVPVPEPAQLAPQSAPEPTPDAPAAAPVQETP 119
Query: 434 PLANIAKAGPGPA 472
+A A P PA
Sbjct: 120 QVAP-APETPAPA 131
>AC006696-4|AAF39985.1| 215|Caenorhabditis elegans Hypothetical
protein W08E12.6 protein.
Length = 215
Score = 30.7 bits (66), Expect = 1.1
Identities = 18/45 (40%), Positives = 19/45 (42%)
Frame = +2
Query: 335 GPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGP 469
GPA V L +I PP P P FG P A I GP P
Sbjct: 73 GPACVPLAPIIVNGPPPCFGPACPPPCFGPACAPPAPIIVNGPPP 117
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +2
Query: 356 PSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGP 469
P + PPP P P FG PLA I GP P
Sbjct: 52 PIFVAPPPPPCFGPACPPPCFGPACVPLAPIIVNGPPP 89
>Z70756-12|CAA94796.2| 180|Caenorhabditis elegans Hypothetical
protein T06E4.10 protein.
Length = 180
Score = 30.3 bits (65), Expect = 1.4
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +2
Query: 311 IAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLAN-IAKAGPGPASYNTE 487
+AA A +P P V + P+L P APAF P+A+ + A P A+ +
Sbjct: 75 LAAPAFAPAPVVAAAPALAPAYAPAPVVAAAPAFAPAYAPAPVASPMIAAAPALAAASIN 134
Query: 488 GM-TAKAP 508
G+ A AP
Sbjct: 135 GLPVAAAP 142
>L23648-9|AAK95877.1| 466|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 38
protein.
Length = 466
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Frame = +2
Query: 269 VRQNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPE---SRKPRAPAFTFGQKLDPL 439
++Q+ R G + AE + P VS+P G PP + S + RA T Q+ +P
Sbjct: 206 LQQHQQQQQNRAGQLQAEQAFANPPTVSIPPQTGHPPQQTSASSQQRAQE-TMAQQTEPQ 264
Query: 440 ANIAKA 457
++I ++
Sbjct: 265 SHIRES 270
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical
protein F54B11.2 protein.
Length = 304
Score = 29.1 bits (62), Expect = 3.3
Identities = 23/70 (32%), Positives = 27/70 (38%), Gaps = 1/70 (1%)
Frame = +2
Query: 266 GVRQNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKP-PPESRKPRAPAFTFGQKLDPLA 442
G NP P K + EA +P P P G P PP P PA G+ P A
Sbjct: 127 GAPGNPGAPGKGAA-VPCEAKTPPPCK---PCPAGPPGPPGPDGPAGPAGPDGEAGSPAA 182
Query: 443 NIAKAGPGPA 472
PGP+
Sbjct: 183 PSPPGPPGPS 192
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 3.3
Identities = 22/76 (28%), Positives = 29/76 (38%), Gaps = 5/76 (6%)
Frame = +2
Query: 281 PWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPP-----ESRKPRAPAFTFGQKLDPLAN 445
P PT + P P P + PS+I PPP E +K P G + +
Sbjct: 1360 PPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPPPLPSEEKKNPLPTANNGHTDNGSDD 1419
Query: 446 IAKAGPGPASYNTEGM 493
I + P P S N M
Sbjct: 1420 IDRNVPTPPSQNQYSM 1435
>Z83316-8|CAB54186.1| 409|Caenorhabditis elegans Hypothetical
protein B0379.7 protein.
Length = 409
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/67 (29%), Positives = 28/67 (41%)
Frame = +2
Query: 308 PIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTE 487
P E +P PA S P+ + P P P+ P Q P+ I + P P T
Sbjct: 61 PQQLEQPTPAPAPESAPAPVQCPEPTPEVPQQPT----QVSAPVQEITQGAPAPIPEPTP 116
Query: 488 GMTAKAP 508
+TA+ P
Sbjct: 117 -VTAEQP 122
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/67 (25%), Positives = 28/67 (41%)
Frame = +2
Query: 311 IAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEG 490
+AA +S P V + P+L P ++ P +P T G AN+ P + +
Sbjct: 603 VAATTTSKAPVVTTSPTLA--PTSPTKLPTSPPSTVGTSPTAPANLTTPTTAPVNPTSST 660
Query: 491 MTAKAPI 511
AP+
Sbjct: 661 TAPTAPV 667
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 28.7 bits (61), Expect = 4.3
Identities = 17/67 (25%), Positives = 28/67 (41%)
Frame = +2
Query: 311 IAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEG 490
+AA +S P V + P+L P ++ P +P T G AN+ P + +
Sbjct: 659 VAATTTSKAPVVTTSPTLA--PTSPTKLPTSPPSTVGTSPTAPANLTTPTTAPVNPTSST 716
Query: 491 MTAKAPI 511
AP+
Sbjct: 717 TAPTAPV 723
>Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical
protein ZK1010.5 protein.
Length = 756
Score = 28.3 bits (60), Expect = 5.7
Identities = 16/65 (24%), Positives = 24/65 (36%)
Frame = +2
Query: 275 QNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAK 454
+ P T P + + P P S P + P ES+ P T +DP+ +
Sbjct: 575 EEPATEVPNPQPPSPPSPEPEPEPKSTPEPVTDGPNESQSTALPQQTTDAPVDPVTEASP 634
Query: 455 AGPGP 469
P P
Sbjct: 635 LNPQP 639
>Z70756-10|CAI46587.1| 228|Caenorhabditis elegans Hypothetical
protein T06E4.12 protein.
Length = 228
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/54 (27%), Positives = 22/54 (40%)
Frame = +2
Query: 308 PIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGP 469
P+AA + P V++ P+ + PP P AP A + A P P
Sbjct: 50 PVAAPVLAAAPTVLAAPAPLLAPPAPLLAPPAPVLAAAPAFAAPAPVFAAPPAP 103
>AL033510-6|CAA22062.1| 343|Caenorhabditis elegans Hypothetical
protein Y40H7A.10 protein.
Length = 343
Score = 28.3 bits (60), Expect = 5.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = -3
Query: 676 WTFVKAAAVLSVVYVPGSGINPLASE 599
W F AAA+ S V + G G+ L+S+
Sbjct: 163 WAFATAAAIESAVSISGGGLQSLSSQ 188
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +2
Query: 308 PIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPA 409
P A A + P V P + PPP + P APA
Sbjct: 353 PTPAPAPAEDPVVTPAPEELTTPPPPAPPPPAPA 386
>AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform a protein.
Length = 1273
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 3/21 (14%)
Frame = -3
Query: 391 PRFWRRFTYKGRE---RYYGW 338
PR W + T KGRE R YGW
Sbjct: 645 PRHWNKLTDKGREAFRRIYGW 665
>Z77662-14|CAI79239.1| 245|Caenorhabditis elegans Hypothetical
protein F47B8.13 protein.
Length = 245
Score = 27.9 bits (59), Expect = 7.6
Identities = 24/72 (33%), Positives = 32/72 (44%)
Frame = +2
Query: 290 PTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGP 469
PTK+R +A + + G A + + P PE APA L P + A A G
Sbjct: 86 PTKKRR-VARDYAEGGAAPTAPAEPVPAPAPEPEAAPAPAPVAEPALAPSPDAAPAADG- 143
Query: 470 ASYNTEGMTAKA 505
ASY+ G A A
Sbjct: 144 ASYSA-GAAAPA 154
>Z36719-4|CAA85315.2| 513|Caenorhabditis elegans Hypothetical
protein C06C3.8 protein.
Length = 513
Score = 27.9 bits (59), Expect = 7.6
Identities = 20/47 (42%), Positives = 23/47 (48%)
Frame = -3
Query: 271 NAHRSLHEIDCFTNNEEA*VSPDFRKSAVTCYLQLSTFIKLLVNKIG 131
N R L++ C EE RK + T YLQLS KL V KIG
Sbjct: 208 NCRRPLYKQPCPYPPEELPKPDPERKMSHTEYLQLSESPKLGVQKIG 254
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,025,861
Number of Sequences: 27780
Number of extensions: 346660
Number of successful extensions: 1002
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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