Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00593
(711 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g38560.1 68418.m04662 protein kinase family protein contains ... 31 0.75
At4g35280.1 68417.m05013 zinc finger (C2H2 type) family protein ... 31 0.75
At1g70460.1 68414.m08107 protein kinase, putative contains Pfam ... 31 0.75
At1g35230.1 68414.m04369 arabinogalactan-protein (AGP5) identica... 31 1.00
At2g25050.1 68415.m02996 formin homology 2 domain-containing pro... 30 1.3
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 30 1.7
At3g10525.1 68416.m01263 expressed protein 30 1.7
At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid t... 29 2.3
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 29 3.0
At5g58160.1 68418.m07280 formin homology 2 domain-containing pro... 29 4.0
At5g66370.1 68418.m08368 hypothetical protein similar to unknown... 28 7.0
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 28 7.0
At2g07215.1 68415.m00828 hypothetical protein 28 7.0
At1g20130.1 68414.m02518 family II extracellular lipase, putativ... 28 7.0
At5g37940.1 68418.m04570 NADP-dependent oxidoreductase, putative... 27 9.3
At4g16444.1 68417.m02490 expressed protein 27 9.3
>At5g38560.1 68418.m04662 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 681
Score = 31.1 bits (67), Expect = 0.75
Identities = 21/63 (33%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = +2
Query: 290 PTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPG- 466
P+ + P +SSP P VVS P PPP +P T P IA P
Sbjct: 42 PSPPQSPPPVVSSSPPPPVVSSPPPSSSPPPSPPVITSPPPTVASSPPPPVVIASPPPST 101
Query: 467 PAS 475
PA+
Sbjct: 102 PAT 104
>At4g35280.1 68417.m05013 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 284
Score = 31.1 bits (67), Expect = 0.75
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +2
Query: 287 TPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQK 427
+P K+R A +SS P S P KP P + K P G+K
Sbjct: 39 SPKKKRTKTVASSSSSSPKSASKPKYTKKPDPNAPKITRPCTECGRK 85
>At1g70460.1 68414.m08107 protein kinase, putative contains Pfam
PF00069: Protein kinase domain
Length = 710
Score = 31.1 bits (67), Expect = 0.75
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +2
Query: 290 PTKRRGPIAAEA-SSPGPAVVSLPSLIGKPPPESRKPRAP 406
PT P + A SSP PA+ SLP + PPP P P
Sbjct: 32 PTDSAPPPSPPADSSPPPALPSLPPAVFSPPPTVSSPPPP 71
>At1g35230.1 68414.m04369 arabinogalactan-protein (AGP5) identical
to gi_3883128_gb_AAC77827
Length = 133
Score = 30.7 bits (66), Expect = 1.00
Identities = 19/85 (22%), Positives = 33/85 (38%)
Frame = +2
Query: 257 TPMGVRQNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDP 436
+P+ P + P + +++P P+ + + +PP ES P AP + P
Sbjct: 31 SPLPATPTPSQSPRATAPAPSPSANPPPSAPTTAPPVSQPPTES--PPAPPTSTSPSGAP 88
Query: 437 LANIAKAGPGPASYNTEGMTAKAPI 511
N+ GPA G A +
Sbjct: 89 GTNVPSGEAGPAQSPLSGSPNAAAV 113
>At2g25050.1 68415.m02996 formin homology 2 domain-containing
protein / FH2 domain-containing protein contains formin
homology 2 domain, Pfam:PF02128
Length = 1111
Score = 30.3 bits (65), Expect = 1.3
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = +2
Query: 275 QNPWTPTKRRGPIAAEA---SSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLAN 445
Q+P TP GP +AEA SSP P + L L PPP P + + +
Sbjct: 537 QSP-TPVHSNGPPSAEAAVTSSPLPPLKPLRILSRPPPPPPPPPISSLRSTPSPSSTSNS 595
Query: 446 IAKAGPGP 469
IA GP P
Sbjct: 596 IATQGPPP 603
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/38 (44%), Positives = 18/38 (47%)
Frame = +2
Query: 293 TKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAP 406
TKRR P A +SP P V S P PPP P P
Sbjct: 513 TKRRSPPPAPVNSPPPPVYSPP----PPPPPVHSPPPP 546
Score = 27.5 bits (58), Expect = 9.3
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = +2
Query: 260 PMGVRQNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAP 406
P V P P P SP P V S P + PPP P P
Sbjct: 544 PPPVHSPPPPPVYSPPPPPPPVHSPPPPVFSPPPPVYSPPPPVHSPPPP 592
>At3g10525.1 68416.m01263 expressed protein
Length = 128
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Frame = +2
Query: 257 TPMGVRQNPWTPTKRRGPIAAE---ASSPGPAVVSLPSLIGKPPPESRKPRAP 406
TP+ +R K G + S+P +P+++ PPP RKPR P
Sbjct: 16 TPIKIRSKTSKTKKDEGDDDEDDLRCSTPTSQEHKIPAVVDSPPPPPRKPRPP 68
>At4g22470.1 68417.m03245 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
hydroxyproline-rich glycoprotein DZ-HRGP from Volvox
carteri f. nagariensis GP|6523547; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 375
Score = 29.5 bits (63), Expect = 2.3
Identities = 20/66 (30%), Positives = 24/66 (36%)
Frame = +2
Query: 275 QNPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAK 454
Q P PT + P A + P P S P + PP KP P + Q P
Sbjct: 52 QPPTPPTFQPAPPANDQPPPPPQSTSPPPVATTPPALPPKPLPPPLSPPQTTPPPPPAIT 111
Query: 455 AGPGPA 472
P PA
Sbjct: 112 PPPPPA 117
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/61 (26%), Positives = 23/61 (37%)
Frame = +2
Query: 326 SSPGPAVVSLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASYNTEGMTAKA 505
SSP P V P+ PPP+ + +P + P + P P Y T+
Sbjct: 563 SSPPPVVNCPPTTQSPPPPKYEQTPSPREYYPSPSPPYYQYTSSPPPPTYYATQSPPPPP 622
Query: 506 P 508
P
Sbjct: 623 P 623
>At5g58160.1 68418.m07280 formin homology 2 domain-containing
protein / FH2 domain-containing protein low similarity
to SP|Q05858 Formin (Limb deformity protein) {Gallus
gallus}; contains Pfam profile PF02181: Formin Homology
2(FH2) Domain
Length = 1307
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +2
Query: 281 PWTPTKRRGPIAAEASSPG--PAVVSLPSLIGKPPPESRKPRAP 406
P PT + I+A SSP PA LP+ PPP + P P
Sbjct: 737 PAPPTPQSNGISAMKSSPPAPPAPPRLPTHSASPPPPTAPPPPP 780
>At5g66370.1 68418.m08368 hypothetical protein similar to unknown
protein (emb CAB62624.1)
Length = 150
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -3
Query: 355 ERYYGWSRTGSFSSYWPSSFCWS 287
+ YYG + S++SYWPS C+S
Sbjct: 101 DSYYG--QPPSYNSYWPSDNCYS 121
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +2
Query: 350 SLPSLIGKPPPESRKPRAPAFTFGQKLDPLANIAKAGPGPASY 478
S PS P P + + AP+ T G D +N+ A PG + +
Sbjct: 90 SAPSSAPPPAPAASQTTAPSVTRGVGSDNSSNLGGASPGESLF 132
>At2g07215.1 68415.m00828 hypothetical protein
Length = 245
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/31 (38%), Positives = 13/31 (41%)
Frame = -3
Query: 343 GWSRTGSFSSYWPSSFCWSPWVLANAHRSLH 251
GW S+ S F W PW L R LH
Sbjct: 91 GWDVLEEHSNEGDSPFKWCPWPLKTEKRRLH 121
>At1g20130.1 68414.m02518 family II extracellular lipase, putative
contains Pfam profile PF00657: GDSL-like
Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
Length = 1006
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +2
Query: 278 NPWTPTKRRGPIAAEASSPGPAVVSLPSLIGKPPPESRKPRAPA 409
NP TP P+A S P PS PPP+ + PA
Sbjct: 2 NPPTPDPSPKPVAPPGPSSKPVAPPGPSPCPSPPPKPQPKPPPA 45
>At5g37940.1 68418.m04570 NADP-dependent oxidoreductase, putative
similar to probable NADP-dependent oxidoreductase
(zeta-crystallin homolog) P1 [SP|Q39172][gi:886428],
Arabidopsis thaliana
Length = 353
Score = 27.5 bits (58), Expect = 9.3
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +2
Query: 365 IGKPPPESRKPRAPAFTFGQKLDPLANIAKA-GPGPASYNT 484
+GKP P S+ A AFT G+ + +AKA G +Y T
Sbjct: 65 MGKPDPSSQASMAHAFTIGKPISGF-GVAKAIDSGHPNYKT 104
>At4g16444.1 68417.m02490 expressed protein
Length = 178
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -1
Query: 339 GPGLEASAAIGPLRFVGVHGFWRTPIGVYTKLIASP 232
G GL AS + + + V FWRTPI + K + P
Sbjct: 104 GKGLLASKVV--IYLILVLCFWRTPIAIIAKQLVQP 137
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,353,256
Number of Sequences: 28952
Number of extensions: 331290
Number of successful extensions: 1115
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 933
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1080
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1535986264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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