Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00591
         (703 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81465-2|CAB03861.1| 1642|Caenorhabditis elegans Hypothetical pr...    29   3.2  
U64846-1|AAG24113.2|  352|Caenorhabditis elegans Serpentine rece...    29   3.2  
Z75545-1|CAB61025.1|  665|Caenorhabditis elegans Hypothetical pr...    28   5.6  
AB000913-1|BAA21715.1|  665|Caenorhabditis elegans UNC-14 protein.     28   5.6  
Z70311-11|CAA94380.1|  484|Caenorhabditis elegans Hypothetical p...    28   7.4  
Z70306-6|CAA94326.1|  484|Caenorhabditis elegans Hypothetical pr...    28   7.4  
Z68315-2|CAA92668.1|  535|Caenorhabditis elegans Hypothetical pr...    28   7.4  
U00040-4|AAM22034.1| 1139|Caenorhabditis elegans Hypothetical pr...    27   9.8  

>Z81465-2|CAB03861.1| 1642|Caenorhabditis elegans Hypothetical
           protein C09F9.2 protein.
          Length = 1642

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -2

Query: 351 WLSIGWSSPVSTV*CECSMDASLFSGLVTLRTSS 250
           W+++GW SP +T    C + A  F+G     TSS
Sbjct: 265 WIAVGWKSPEAT----CDLSAGDFAGRNVATTSS 294


>U64846-1|AAG24113.2|  352|Caenorhabditis elegans Serpentine
           receptor, class t protein3 protein.
          Length = 352

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = -1

Query: 547 FPILGKYPSESESLIILPQFFLIIR 473
           +PILG Y   S  ++ LP FF+IIR
Sbjct: 36  WPILGSYLIVSGIILYLPSFFVIIR 60


>Z75545-1|CAB61025.1|  665|Caenorhabditis elegans Hypothetical
           protein K10D3.2 protein.
          Length = 665

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
 Frame = -2

Query: 261 RTSSVWIELHVVDFRRKNRMVC----STWRTRNIVTLIQP*RFLASLSRCTYYRTLCWRW 94
           +T +V +E+   +  R+N + C       + + + TL     FL S S  + YRTL WR 
Sbjct: 464 KTDNVKVEIFFEELIRENSLDCWLCYIVLKEKVLKTLYSENAFLLSAS--SEYRTLLWRM 521

Query: 93  PEGRLDEPLARSLSKEQHQ 37
            +     P+  + S   HQ
Sbjct: 522 VDSLSLLPVIEARSDSVHQ 540


>AB000913-1|BAA21715.1|  665|Caenorhabditis elegans UNC-14 protein.
          Length = 665

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
 Frame = -2

Query: 261 RTSSVWIELHVVDFRRKNRMVC----STWRTRNIVTLIQP*RFLASLSRCTYYRTLCWRW 94
           +T +V +E+   +  R+N + C       + + + TL     FL S S  + YRTL WR 
Sbjct: 464 KTDNVKVEIFFEELIRENSLDCWLCYIVLKEKVLKTLYSENAFLLSAS--SEYRTLLWRM 521

Query: 93  PEGRLDEPLARSLSKEQHQ 37
            +     P+  + S   HQ
Sbjct: 522 VDSLSLLPVIEARSDSVHQ 540


>Z70311-11|CAA94380.1|  484|Caenorhabditis elegans Hypothetical
           protein T25B9.9 protein.
          Length = 484

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +3

Query: 30  FSSGAVLCSGFVPEVHPAD-LQATANTASDNTYSATSWPGT 149
           FSS      G+  EV PA+ LQA  +    +TY   + PGT
Sbjct: 424 FSSALAFYDGYTSEVVPANLLQAQRDYFGAHTYELLAKPGT 464


>Z70306-6|CAA94326.1|  484|Caenorhabditis elegans Hypothetical
           protein T25B9.9 protein.
          Length = 484

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +3

Query: 30  FSSGAVLCSGFVPEVHPAD-LQATANTASDNTYSATSWPGT 149
           FSS      G+  EV PA+ LQA  +    +TY   + PGT
Sbjct: 424 FSSALAFYDGYTSEVVPANLLQAQRDYFGAHTYELLAKPGT 464


>Z68315-2|CAA92668.1|  535|Caenorhabditis elegans Hypothetical
           protein F28C6.2 protein.
          Length = 535

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = +3

Query: 186 AKYCRPSDSSFENRRRAARSKPKMFA 263
           A  C PS SS  NR+R A   P  FA
Sbjct: 21  ADICNPSSSSSSNRKRQADPAPDNFA 46


>U00040-4|AAM22034.1| 1139|Caenorhabditis elegans Hypothetical
           protein C18H2.5 protein.
          Length = 1139

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 14/54 (25%), Positives = 26/54 (48%)
 Frame = -2

Query: 396 SFPRGYKNRRSLVLRWLSIGWSSPVSTV*CECSMDASLFSGLVTLRTSSVWIEL 235
           +FP   +  +++  + +   W +P   V  E SM   L   +V  +T +VW+ L
Sbjct: 253 NFPNDLEKLKNIAKKIIK-DWEAPQVDVYKEVSMTVQLHKDMVQNKTMAVWLSL 305


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,026,474
Number of Sequences: 27780
Number of extensions: 340723
Number of successful extensions: 1062
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1062
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)