Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00590X
         (395 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL032631-5|CAA21573.1|  113|Caenorhabditis elegans Hypothetical ...   121   2e-28
L17337-6|AAA28221.2|   44|Caenorhabditis elegans Hypothetical pr...    32   0.17 
Z82277-3|CAB05249.2|  495|Caenorhabditis elegans Hypothetical pr...    27   3.7  
Z81089-3|CAB03137.1|  275|Caenorhabditis elegans Hypothetical pr...    27   3.7  
Z79757-6|CAB02127.1|  350|Caenorhabditis elegans Hypothetical pr...    26   8.5  
Z68317-2|CAA92690.2|  980|Caenorhabditis elegans Hypothetical pr...    26   8.5  
AF047662-6|AAC04441.1|  185|Caenorhabditis elegans Hypothetical ...    26   8.5  

>AL032631-5|CAA21573.1|  113|Caenorhabditis elegans Hypothetical
           protein Y106G6H.3 protein.
          Length = 113

 Score =  121 bits (292), Expect = 2e-28
 Identities = 56/79 (70%), Positives = 66/79 (83%)
 Frame = +3

Query: 27  MVAAKKQKKTIESINSRLALVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKNAPPLRKSEI 206
           M  A K +K  E+INSRL++VMK+G+Y LGYKQTLK+L  GKAKLVIIA N PPLRKSEI
Sbjct: 1   MAPAAKPQKNAENINSRLSMVMKTGQYVLGYKQTLKSLLNGKAKLVIIANNTPPLRKSEI 60

Query: 207 EYYALLAKTGVHHYSGTTL 263
           EYYA+LAKTGVHHY+G  +
Sbjct: 61  EYYAMLAKTGVHHYNGNNI 79



 Score = 61.7 bits (143), Expect = 2e-10
 Identities = 26/37 (70%), Positives = 32/37 (86%)
 Frame = +2

Query: 254 DNIELGTACGKYYRVCTLAITDPGDSDIITTLPEASA 364
           +NIELGTACG+ +RVCTLA+TD GDSDII ++P  SA
Sbjct: 77  NNIELGTACGRLFRVCTLAVTDAGDSDIILSVPSESA 113


>L17337-6|AAA28221.2|   44|Caenorhabditis elegans Hypothetical
           protein ZK686.1 protein.
          Length = 44

 Score = 31.9 bits (69), Expect = 0.17
 Identities = 17/32 (53%), Positives = 23/32 (71%)
 Frame = +3

Query: 84  LVMKSGKYCLGYKQTLKTLRQGKAKLVIIAKN 179
           +VMK+G+Y L Y+Q LK+L    AKLVI  K+
Sbjct: 1   MVMKTGQYVL-YEQKLKSLLNENAKLVINTKH 31


>Z82277-3|CAB05249.2|  495|Caenorhabditis elegans Hypothetical
           protein LLC1.3 protein.
          Length = 495

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 3   FISIYAPKMVAAKKQKKTIESINSRLALV 89
           F +I  P  V AKK   ++E+IN+R  L+
Sbjct: 139 FATIVGPNTVQAKKNDGSVETINARNILI 167


>Z81089-3|CAB03137.1|  275|Caenorhabditis elegans Hypothetical
           protein F53H4.4 protein.
          Length = 275

 Score = 27.5 bits (58), Expect = 3.7
 Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 6/85 (7%)
 Frame = +3

Query: 6   ISIYAPKMVAAKKQKKTIESINSRLALVM------KSGKYCLGYKQTLKTLRQGKAKLVI 167
           +S   P M A K + + +   N RLA+ M      +SG Y     Q  ++LR       +
Sbjct: 171 LSKLTPSMFAEKARPRRVRERNGRLAVRMSRISWNRSGLYYNAIIQFFESLRG-----TV 225

Query: 168 IAKNAPPLRKSEIEYYALLAKTGVH 242
           I +   PL +  + Y  +L  T  H
Sbjct: 226 ITQGEQPLCEKSVTYQEMLKHTLAH 250


>Z79757-6|CAB02127.1|  350|Caenorhabditis elegans Hypothetical
           protein F55B12.6 protein.
          Length = 350

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -3

Query: 162 PALLCLVEEFSKFACILSNIFPISSP 85
           PAL    EEFSKF  +L  I+P   P
Sbjct: 290 PALNLDSEEFSKFVTLLYAIYPAIDP 315


>Z68317-2|CAA92690.2|  980|Caenorhabditis elegans Hypothetical
           protein T01H3.2 protein.
          Length = 980

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 57  WSFSVSLLQPFWERKC 10
           W +S+S L P W+++C
Sbjct: 140 WQYSLSFLAPKWDKQC 155


>AF047662-6|AAC04441.1|  185|Caenorhabditis elegans Hypothetical
           protein T22B2.2 protein.
          Length = 185

 Score = 26.2 bits (55), Expect = 8.5
 Identities = 10/35 (28%), Positives = 18/35 (51%)
 Frame = -1

Query: 311 WRVCTLCSIYRMLFLIQCCPAVVVNTCLS*EGVVF 207
           W V T C ++  +F  +    ++ N C+S  G V+
Sbjct: 43  WGVITACHLFPAVFPHRYSIKIIPNACISLSGAVY 77


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,858,036
Number of Sequences: 27780
Number of extensions: 165316
Number of successful extensions: 420
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 420
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 609015246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)