Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00589X
         (623 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               26   0.26 
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        23   3.2  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        23   3.2  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        23   3.2  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   3.2  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    21   7.4  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    21   7.4  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = -1

Query: 185 VLQTVHDLALNDKIDPYSVLYTLLYHEYLLFEVGQVPS 72
           ++   + L L +  D +  L    Y EY ++E+G++ S
Sbjct: 382 LMDETNQLTLQETADAFKDLQDKYYEEYKMYELGELAS 419



 Score = 21.0 bits (42), Expect = 9.8
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = +2

Query: 266 QSYTTPPEDAPSGIMARGSYSVNSLFTDDDKN 361
           ++YTTP      GI   G     +   DDD++
Sbjct: 62  KNYTTPVNFVAGGIQQAGKPKEETDDKDDDES 93


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -2

Query: 298 RCILGGRCVRLNLSLGG*EPTICVILSTGT 209
           RC LG    R+ LS G   PT+   L+ GT
Sbjct: 625 RCNLGLEPPRVILSSGAKSPTVLEELTHGT 654


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -2

Query: 298 RCILGGRCVRLNLSLGG*EPTICVILSTGT 209
           RC LG    R+ LS G   PT+   L+ GT
Sbjct: 625 RCNLGLEPPRVILSSGAKSPTVLEELTHGT 654


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 13/30 (43%), Positives = 16/30 (53%)
 Frame = -2

Query: 298 RCILGGRCVRLNLSLGG*EPTICVILSTGT 209
           RC LG    R+ LS G   PT+   L+ GT
Sbjct: 625 RCNLGLEPPRVILSSGAKSPTVLEELTHGT 654


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +1

Query: 421 ALHSKIDWVGRGYLVAIPVLA 483
           AL+ +++W G   LV + VLA
Sbjct: 53  ALYERVEWSGPWILVTLIVLA 73


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 150 IVQREIVHGLKYVQKTYRLGVP 215
           I++   + G  YV+  Y LG+P
Sbjct: 283 IMELHNIEGTHYVKIVYYLGIP 304


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 150 IVQREIVHGLKYVQKTYRLGVP 215
           I++   + G  YV+  Y LG+P
Sbjct: 298 IMELHNIEGTHYVKIVYYLGIP 319


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,731
Number of Sequences: 438
Number of extensions: 3420
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18582456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)