Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00588X
(595 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p... 26 0.80
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 25 1.8
AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein p... 25 2.4
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript... 24 3.2
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 23 5.6
DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2 pro... 23 5.6
AY344822-1|AAR02433.1| 257|Anopheles gambiae CP5039 protein. 23 7.4
AY344821-1|AAR02432.1| 257|Anopheles gambiae CP5039 protein. 23 7.4
AY344820-1|AAR02431.1| 257|Anopheles gambiae CP5039 protein. 23 7.4
AY344819-1|AAR02430.1| 257|Anopheles gambiae CP5039 protein. 23 7.4
AY344818-1|AAR02429.1| 257|Anopheles gambiae CP5039 protein. 23 7.4
AY344817-1|AAR02428.1| 257|Anopheles gambiae CP5039 protein. 23 7.4
AY344816-1|AAR02427.1| 257|Anopheles gambiae CP5039 protein. 23 7.4
AY344815-1|AAR02426.1| 257|Anopheles gambiae CP5039 protein. 23 7.4
>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
protein.
Length = 1077
Score = 26.2 bits (55), Expect = 0.80
Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +3
Query: 279 TQTE--FSTKRVFADASSINNHLYNLVTGGDYINAVKTVRS 395
TQT+ F+ RV + INN +T G+ + A+K +S
Sbjct: 418 TQTDDTFTCTRVIPEDCEINNGCMEEITSGEILYAIKNSQS 458
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 25.0 bits (52), Expect = 1.8
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 1 GKANTQQDPRRVCGRQRHFQLH--QGRQRQNCYHQHGANH 114
G++ + DP R G H Q H Q +Q+Q +H H +H
Sbjct: 129 GQSGSPPDPTR-NGIVLHHQAHQQQQQQQQQLHHHHHHHH 167
>AB090812-1|BAC57899.1| 541|Anopheles gambiae gag-like protein
protein.
Length = 541
Score = 24.6 bits (51), Expect = 2.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +1
Query: 1 GKANTQQDPRRVCGRQRHFQLHQGRQRQNCYHQ 99
GK +QQ P++ Q+ Q Q RQ+Q HQ
Sbjct: 252 GKPRSQQQPQQQQQPQQKQQQLQRRQQQQQQHQ 284
>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
protein.
Length = 1168
Score = 24.2 bits (50), Expect = 3.2
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -1
Query: 103 RADGNSFDAVVPDVTGSVAVVHRHD 29
RAD N F PDVT + +V+ R D
Sbjct: 167 RADTNRFPPSRPDVTFASSVISRLD 191
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 23.4 bits (48), Expect = 5.6
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1
Query: 484 YANDMAFLMPCETSCETTSR 425
YA+D+A L+P T+ E +R
Sbjct: 718 YADDLALLVPATTTDEVRAR 737
>DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2
protein.
Length = 961
Score = 23.4 bits (48), Expect = 5.6
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 43 RQRHFQLHQGRQRQNCYHQH 102
RQ+H Q Q +Q+Q H+H
Sbjct: 899 RQQHQQQQQQQQQQQQQHEH 918
>AY344822-1|AAR02433.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 23.0 bits (47), Expect = 7.4
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Frame = +3
Query: 480 AYKLWHEGHK----TSSKITSRANSNSYSTKRELNSSANITI 593
A+K W EG++ TS+KI + N +R L + T+
Sbjct: 46 AWKCWKEGYRPPPATSNKIHEQGNGTVAEIERILRFDQSNTV 87
>AY344821-1|AAR02432.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 23.0 bits (47), Expect = 7.4
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Frame = +3
Query: 480 AYKLWHEGHK----TSSKITSRANSNSYSTKRELNSSANITI 593
A+K W EG++ TS+KI + N +R L + T+
Sbjct: 46 AWKCWKEGYRPPPATSNKIHEQGNGTVAEIERILRFDQSNTV 87
>AY344820-1|AAR02431.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 23.0 bits (47), Expect = 7.4
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Frame = +3
Query: 480 AYKLWHEGHK----TSSKITSRANSNSYSTKRELNSSANITI 593
A+K W EG++ TS+KI + N +R L + T+
Sbjct: 46 AWKCWKEGYRPPPATSNKIHEQGNGTVAEIERILRFDQSNTV 87
>AY344819-1|AAR02430.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 23.0 bits (47), Expect = 7.4
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Frame = +3
Query: 480 AYKLWHEGHK----TSSKITSRANSNSYSTKRELNSSANITI 593
A+K W EG++ TS+KI + N +R L + T+
Sbjct: 46 AWKCWKEGYRPPPATSNKIHEQGNGTVAEIERILRFDQSNTV 87
>AY344818-1|AAR02429.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 23.0 bits (47), Expect = 7.4
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Frame = +3
Query: 480 AYKLWHEGHK----TSSKITSRANSNSYSTKRELNSSANITI 593
A+K W EG++ TS+KI + N +R L + T+
Sbjct: 46 AWKCWKEGYRPPPATSNKIHEQGNGTVAEIERILRFDQSNTV 87
>AY344817-1|AAR02428.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 23.0 bits (47), Expect = 7.4
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Frame = +3
Query: 480 AYKLWHEGHK----TSSKITSRANSNSYSTKRELNSSANITI 593
A+K W EG++ TS+KI + N +R L + T+
Sbjct: 46 AWKCWKEGYRPPPATSNKIHEQGNGTVAEIERILRFDQSNTV 87
>AY344816-1|AAR02427.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 23.0 bits (47), Expect = 7.4
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Frame = +3
Query: 480 AYKLWHEGHK----TSSKITSRANSNSYSTKRELNSSANITI 593
A+K W EG++ TS+KI + N +R L + T+
Sbjct: 46 AWKCWKEGYRPPPATSNKIHEQGNGTVAEIERILRFDQSNTV 87
>AY344815-1|AAR02426.1| 257|Anopheles gambiae CP5039 protein.
Length = 257
Score = 23.0 bits (47), Expect = 7.4
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Frame = +3
Query: 480 AYKLWHEGHK----TSSKITSRANSNSYSTKRELNSSANITI 593
A+K W EG++ TS+KI + N +R L + T+
Sbjct: 46 AWKCWKEGYRPPPATSNKIHEQGNGTVAEIERILRFDQSNTV 87
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 556,798
Number of Sequences: 2352
Number of extensions: 9726
Number of successful extensions: 60
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57188952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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