Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00585
(457 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 69 2e-12
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 2e-11
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 54 7e-08
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 45 3e-05
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.009
SB_50337| Best HMM Match : Extensin_1 (HMM E-Value=0.19) 29 1.4
SB_36345| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_16781| Best HMM Match : RRS1 (HMM E-Value=1.6) 29 1.8
SB_32428| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_45043| Best HMM Match : Rho_N (HMM E-Value=0.0046) 29 2.4
SB_40528| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.) 24 2.7
SB_12390| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.2
SB_31775| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.2
SB_4431| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.2
SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4) 28 4.2
SB_34188| Best HMM Match : Astacin (HMM E-Value=0) 28 4.2
SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 28 4.2
SB_10066| Best HMM Match : GPS (HMM E-Value=8.6e-07) 27 5.6
SB_40415| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.6
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 27 7.4
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 27 7.4
SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 27 9.7
SB_43252| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 27 9.7
SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 68.9 bits (161), Expect = 2e-12
Identities = 28/43 (65%), Positives = 37/43 (86%)
Frame = +2
Query: 131 DTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQGAGGAP 259
+ +KWLD+NQ A+K+E+E+ QKELE + NPIITK+YQ AGGAP
Sbjct: 578 EVLKWLDTNQTAEKDEFEYHQKELEKVCNPIITKLYQQAGGAP 620
Score = 67.3 bits (157), Expect = 6e-12
Identities = 30/53 (56%), Positives = 42/53 (79%)
Frame = +3
Query: 3 KETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCKTPSSGWIPTS 161
++ IQ KN+LESY +SMKST+ED+K+K+KIS+ DK+ ILDKC T W+ T+
Sbjct: 535 RDRIQTKNSLESYAYSMKSTVEDDKVKDKISEEDKKAILDKC-TEVLKWLDTN 586
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 65.3 bits (152), Expect = 2e-11
Identities = 28/41 (68%), Positives = 34/41 (82%)
Frame = +2
Query: 134 TIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQGAGGA 256
T+ WL+ NQ A+KEE + QKELEG+ NPIITK+YQGAGGA
Sbjct: 671 TLDWLEHNQSAEKEEIDAHQKELEGVCNPIITKLYQGAGGA 711
Score = 64.5 bits (150), Expect = 4e-11
Identities = 25/43 (58%), Positives = 38/43 (88%)
Frame = +3
Query: 3 KETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCK 131
+E IQ+KN+LESY FSMKSTMEDEK+K+K+S+ +++ ++ +CK
Sbjct: 627 RERIQSKNSLESYAFSMKSTMEDEKVKDKLSEDEREKVISRCK 669
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 53.6 bits (123), Expect = 7e-08
Identities = 19/44 (43%), Positives = 35/44 (79%)
Frame = +2
Query: 122 QVQDTIKWLDSNQLADKEEYEHKQKELEGIYNPIITKMYQGAGG 253
+V++ + WL+ N LA+KEE+E ++KEL+ + +PI+ K++ G+GG
Sbjct: 574 KVEEVLNWLEKNSLAEKEEFEEQEKELQRVCSPIMAKVHGGSGG 617
Score = 44.0 bits (99), Expect = 6e-05
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = +3
Query: 3 KETIQAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDK 125
+E I A+N LESY F +KS + + L+ K+S SDK T+ +K
Sbjct: 534 REKIAARNRLESYAFGVKSAISEPSLEGKLSQSDKDTVKNK 574
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 45.2 bits (102), Expect = 3e-05
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +3
Query: 3 KETIQAKNALESYCFSMKSTMED-EKLKEKISDSDKQTILDKCKTPSSGWIPTSWPTRRS 179
KE ++A+N LESY +S+K+ + D EKL K+S+ DK+TI + + S +
Sbjct: 1228 KEKVEARNELESYAYSLKNQVGDKEKLGGKLSEDDKKTITEAVEKAISWMDKNQDASVED 1287
Query: 180 MSTSRKNWK 206
++ WK
Sbjct: 1288 FKKEKRKWK 1296
Score = 30.3 bits (65), Expect = 0.79
Identities = 10/32 (31%), Positives = 22/32 (68%)
Frame = +2
Query: 125 VQDTIKWLDSNQLADKEEYEHKQKELEGIYNP 220
V+ I W+D NQ A E+++ ++++ + +Y+P
Sbjct: 1270 VEKAISWMDKNQDASVEDFKKEKRKWKMLYSP 1301
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 36.7 bits (81), Expect = 0.009
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 2/89 (2%)
Frame = +3
Query: 15 QAKNALESYCFSMKSTMEDEKLKEKISDSDKQTILDKCKTPSSGWI-PTSWPTRRSMSTS 191
+AKNALES+ F ++ M E L EK+S ++ + + T +S W+ W + ++
Sbjct: 718 RAKNALESHIFGVRDEMNSE-LGEKLSTEAERETISEALTAASDWLDEDGWDSTANVYNE 776
Query: 192 RKN-WKAFTIR*LRRCTRVPEEPRRYAGL 275
+ N K + RR P+ A L
Sbjct: 777 KLNGLKKISADFRRRMKEHKTRPKALAAL 805
>SB_50337| Best HMM Match : Extensin_1 (HMM E-Value=0.19)
Length = 86
Score = 29.5 bits (63), Expect = 1.4
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Frame = +2
Query: 290 PEPEVPPPGLEALAPPSRRSIKP-TFHTTXKPTCNNHLVTSP 412
P+P+ PPPG PPS + P T +P VT P
Sbjct: 28 PKPDTPPPGTNIPTPPSPNTPPPVTQPPVTQPPVTQPPVTQP 69
>SB_36345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 193
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/29 (48%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
Frame = +3
Query: 63 MEDEKLKEKI---SDSDKQTILDKCKTPS 140
+EDE LKE + D+DK+ ++D CKT S
Sbjct: 101 IEDEDLKEMMRQQDDNDKRFLIDTCKTES 129
>SB_16781| Best HMM Match : RRS1 (HMM E-Value=1.6)
Length = 295
Score = 29.1 bits (62), Expect = 1.8
Identities = 20/72 (27%), Positives = 30/72 (41%)
Frame = +2
Query: 164 ADKEEYEHKQKELEGIYNPIITKMYQGAGGAPEVCRASRAEHPEPEVPPPGLEALAPPSR 343
A +E KQK+L GIY P+ T+ G A + + P++PP P+
Sbjct: 50 AQRERLREKQKQL-GIYRPMTTQEKCRKGEAICITAVAVGADERPKLPPVLTNCQTVPNI 108
Query: 344 RSIKPTFHTTXK 379
+ TT K
Sbjct: 109 GKLPFKIETTEK 120
>SB_32428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1128
Score = 28.7 bits (61), Expect = 2.4
Identities = 16/40 (40%), Positives = 20/40 (50%)
Frame = +2
Query: 266 CRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTXKPT 385
C A A+ P+ +VPPP APP + P TT PT
Sbjct: 92 CNAKPAQ-PDTDVPPPPATTSAPPPPTTTAPP-ATTSPPT 129
>SB_45043| Best HMM Match : Rho_N (HMM E-Value=0.0046)
Length = 589
Score = 28.7 bits (61), Expect = 2.4
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Frame = +2
Query: 188 KQKELEGIYNPIITKMYQGAGGAPE----VCRASRAEHPEPEVPPPGLEALAPPSRRSIK 355
K++ +EG Y ++ + GGAP +S + P PE+ P L PP + +
Sbjct: 12 KERGIEGYYGLRRAELVEALGGAPRGVVPDVPSSILDEPIPEIDVPILRPSHPPRNKGVP 71
Query: 356 PTFH 367
H
Sbjct: 72 SLKH 75
>SB_40528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 252
Score = 28.7 bits (61), Expect = 2.4
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 6/79 (7%)
Frame = +2
Query: 32 GILLLQHEVYHGG*EAQGKDL*L*QADHPRQVQDTIKW----LDSNQL-ADKEEYEHKQK 196
G+L L + HG A G+D L + D R++Q+ + LD+ + AD++E +H
Sbjct: 57 GLLELMDDFNHGRLHAFGRDFTLEKMDKVRELQERVAQQHFELDNAETEADEDEVKHNGF 116
Query: 197 ELEGIYN-PIITKMYQGAG 250
+ N P+ T+ Q G
Sbjct: 117 SSDNAANHPVATETRQCKG 135
>SB_32600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1572
Score = 24.2 bits (50), Expect(2) = 2.7
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +2
Query: 290 PEPEVPPPGLEALAPPSRRSIKPTFHTTXKP 382
P P+VPPPG AP R +H P
Sbjct: 597 PHPKVPPPG----APYQRLPYSGAYHPRLPP 623
Score = 22.6 bits (46), Expect(2) = 2.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 251 GAPEVCRASRAEHPEPEVPPPG 316
GAP R P P VPPPG
Sbjct: 575 GAPHP-RVPPPGTPHPRVPPPG 595
>SB_12390| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 868
Score = 28.3 bits (60), Expect = 3.2
Identities = 12/60 (20%), Positives = 25/60 (41%)
Frame = +2
Query: 179 YEHKQKELEGIYNPIITKMYQGAGGAPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKP 358
+E +EL + + +++ +GG P + PE+ P P +R ++P
Sbjct: 147 FEFASEELNPVSEKVERNLHKASGGGPSLGAPGGRPRIRPEIRPGARPGARPGARPRVRP 206
>SB_31775| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 551
Score = 28.3 bits (60), Expect = 3.2
Identities = 16/53 (30%), Positives = 22/53 (41%)
Frame = +2
Query: 251 GAPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTXKPTCNNHLVTS 409
G+ + C A+ P + L+ P S S +PT T CNN TS
Sbjct: 416 GSEQYCYFGDAKVPATFMNDTTLKCTVPTSSVSSRPTVAVTLNGGCNNFTTTS 468
>SB_4431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 145
Score = 28.3 bits (60), Expect = 3.2
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 7/49 (14%)
Frame = +2
Query: 230 KMYQGAGGAP---EVC--RASRAEHPEPEVPPPGLEA--LAPPSRRSIK 355
K Y+G GG ++C SR EHP P PPGLE+ + P +R ++
Sbjct: 70 KYYRGRGGQHRDGKLCVGTVSRPEHPGP---PPGLESAGIRHPKQRGVR 115
>SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4)
Length = 184
Score = 27.9 bits (59), Expect = 4.2
Identities = 16/51 (31%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Frame = +2
Query: 290 PEPEVPPPGLEALAPPSRRS--IKPTFHTTXKPTCNNHLVTSP*LK*INIE 436
P P PPPG E PP + + PT P V+ P K N++
Sbjct: 132 PPPVTPPPGPETPPPPDTPAPPVPPTEAPPTAPPTGGSCVSKPPYKSANMD 182
>SB_34188| Best HMM Match : Astacin (HMM E-Value=0)
Length = 844
Score = 27.9 bits (59), Expect = 4.2
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +3
Query: 96 DSDKQTILDKCKTPSSGWIPTSWPT-RRSMSTSRKNWKAF-TIR*LRRCTRVPEE 254
D K L C TPS GW +SW + +S +K + F T++ L C+ E
Sbjct: 358 DLQKLNKLYDCSTPSGGW--SSWSDWKPCVSDGKKTRQRFCTVKSLSSCSEATAE 410
>SB_14243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1507
Score = 27.9 bits (59), Expect = 4.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 104 QADHPRQVQDTIKWLDSNQLADKEEYEHKQK 196
Q+ H + ++DT K L ADKE E KQ+
Sbjct: 1108 QSSHEKTIKDTQKHLSRMDRADKENSELKQE 1138
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 27.9 bits (59), Expect = 4.2
Identities = 13/27 (48%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
Frame = +2
Query: 290 PEPEVPPPGLE-ALAPPSRRSIKPTFH 367
P P PPP L A APP R P H
Sbjct: 425 PPPPPPPPALRLACAPPRLRFTSPVLH 451
>SB_10066| Best HMM Match : GPS (HMM E-Value=8.6e-07)
Length = 1146
Score = 27.5 bits (58), Expect = 5.6
Identities = 17/54 (31%), Positives = 23/54 (42%)
Frame = +2
Query: 251 GAPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTXKPTCNNHLVTSP 412
G+ + C A+ P + L+ P S S +PT T CNN TSP
Sbjct: 83 GSEQYCYFGDAKVPATFMNDTTLKCTVPTSSVSSRPTVAVTLNGGCNN-FTTSP 135
>SB_40415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1512
Score = 27.5 bits (58), Expect = 5.6
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 7/62 (11%)
Frame = +2
Query: 245 AGGAPEVCRASRAEHPE-PEVPPPGL------EALAPPSRRSIKPTFHTTXKPTCNNHLV 403
A AP+V R+S E P+V P + E +PP RR+ F+T P + +
Sbjct: 834 ADSAPKVARSSSDPPKERPKVDPAAVLSRSCSEPRSPPKRRTSSEAFYTEGLPLAPSTSL 893
Query: 404 TS 409
TS
Sbjct: 894 TS 895
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 27.1 bits (57), Expect = 7.4
Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 6/62 (9%)
Frame = +2
Query: 245 AGGAPEVC-----RASRAEHPEPEVPPPGLEALAPPSRRSI-KPTFHTTXKPTCNNHLVT 406
AGG P++ +A+ A P + PPG APP + S P F P L
Sbjct: 99 AGGMPKLRPAGERKAAGAGPRGPALKPPGFRTTAPPPKNSSPPPPFGAPPPPDRGGQLAK 158
Query: 407 SP 412
P
Sbjct: 159 KP 160
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 27.1 bits (57), Expect = 7.4
Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 6/62 (9%)
Frame = +2
Query: 245 AGGAPEVC-----RASRAEHPEPEVPPPGLEALAPPSRRSI-KPTFHTTXKPTCNNHLVT 406
AGG P++ +A+ A P + PPG APP + S P F P L
Sbjct: 11 AGGMPKLRPAGERKAAGAGPRGPALKPPGFRTTAPPPKNSSPPPPFGAPPPPDRGGQLAK 70
Query: 407 SP 412
P
Sbjct: 71 KP 72
>SB_47667| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
Length = 3891
Score = 26.6 bits (56), Expect = 9.7
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = -3
Query: 242 PGTSS*LSDCKCLPILSACAHTPPCRPAG 156
PGT + KC+ +L C P C PAG
Sbjct: 2968 PGTYQCADNRKCISVLEVCDGIPSC-PAG 2995
>SB_43252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 699
Score = 26.6 bits (56), Expect = 9.7
Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +2
Query: 122 QVQDTIKW-LDSNQLADKEEYEHKQKELEGIYNPIITKM 235
+++ T+K+ LD +LA KE++ +KE EG + TKM
Sbjct: 122 ELRKTVKYALDQEKLA-KEQFGDLKKEFEGYKKKMDTKM 159
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 26.6 bits (56), Expect = 9.7
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +2
Query: 20 QECIGILLLQHEVYHGG*EAQGKDL*L*QADHPRQVQD-TIKWLDSNQLADKEEYEHKQK 196
+E I L+ QHE + +D Q R+ +D + KW SN A E+E+K K
Sbjct: 723 EEQIQALMAQHEDQVKALSQEYED----QIRELREERDISEKWSKSNVDAPYSEFENKMK 778
Query: 197 ELEGIYNPIITKM 235
E++ Y I ++
Sbjct: 779 EIKDHYEREIERL 791
>SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2174
Score = 26.6 bits (56), Expect = 9.7
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = +2
Query: 251 GAPEVCRASRAEHPEPEVPPPGLEALAPPSRRSIKPTFHTTXKPT 385
G P + SR EH + E P P A PS I T T PT
Sbjct: 1630 GRPPLAPGSRPEHRDQE-PAPEPTDNATPSGPQIPSTSQTPASPT 1673
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,664,345
Number of Sequences: 59808
Number of extensions: 279129
Number of successful extensions: 1268
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1257
length of database: 16,821,457
effective HSP length: 76
effective length of database: 12,276,049
effective search space used: 920703675
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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