Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00584X
         (595 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    23   1.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   4.5  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           22   4.5  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   4.5  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    22   4.5  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    21   5.9  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    21   5.9  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   5.9  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   7.8  

>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 8/25 (32%), Positives = 11/25 (44%)
 Frame = +1

Query: 190 EAIKLCPENAAYYGNRSACYMIYAC 264
           EA   CPE   ++ +   C   Y C
Sbjct: 34  EATDQCPEKYGFFADAEQCDKYYEC 58


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -1

Query: 145 NNYHCLFFLQPGSPGFWV 92
           NN + +  L+  +PGFW+
Sbjct: 651 NNGYVVLRLRANNPGFWL 668


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +1

Query: 277 LKMHRKLYHWIQHSPKDT 330
           L    K+Y+ IQHSP+ +
Sbjct: 12  LGQQNKMYNVIQHSPQQS 29


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 379 SPFNRSPNAIQHFAARMYPLVN 314
           SP + S +A    AARMYP V+
Sbjct: 44  SPQHSSSSASTSPAARMYPYVS 65


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -1

Query: 379 SPFNRSPNAIQHFAARMYPLVN 314
           SP + S +A    AARMYP V+
Sbjct: 44  SPQHSSSSASTSPAARMYPYVS 65


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 222 CCIFWAQFNGFIIHGQCS 169
           C +FW  +NG     QCS
Sbjct: 108 CDVFWNCWNGEASRYQCS 125


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -2

Query: 222 CCIFWAQFNGFIIHGQCS 169
           C +FW  +NG     QCS
Sbjct: 108 CDVFWNCWNGEASRYQCS 125


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -1

Query: 145 NNYHCLFFLQPGSPGFWV 92
           NN + +F  +  +PG+W+
Sbjct: 651 NNGYVIFRFRADNPGYWL 668


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -1

Query: 148 INNYHCLFFLQPG 110
           +  Y C+F L+PG
Sbjct: 277 LQEYRCIFSLRPG 289


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,588
Number of Sequences: 336
Number of extensions: 2860
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14935063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)