Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00584X
(595 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 47 2e-06
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 44 2e-05
SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 41 1e-04
SPAC6B12.12 |tom70||mitochondrial TOM complex subunit Tom70|Schi... 40 3e-04
SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyc... 36 0.006
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 33 0.042
SPAC694.02 |||DEAD/DEAH box helicase|Schizosaccharomyces pombe|c... 31 0.17
SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pomb... 29 0.39
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 26 3.6
SPBC577.15c |||NASP family histone binding protein|Schizosacchar... 26 3.6
SPAC4G8.09 |||mitochondrial leucine-tRNA ligase|Schizosaccharomy... 26 4.8
SPBC16E9.08 |mcp4|mug101|sequence orphan|Schizosaccharomyces pom... 26 4.8
SPCC1672.09 |||triglyceride lipase-cholesterol esterase |Schizos... 25 6.3
SPBC947.11c |elg1||DNA replication factor C complex subunit Elg1... 25 6.3
SPAC2G11.05c |||BRO1 domain protein|Schizosaccharomyces pombe|ch... 25 6.3
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 25 8.3
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 47.2 bits (107), Expect = 2e-06
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +1
Query: 97 KSPESLAEEKKDSGNYLYKFKNYKGALAMYDEAIKLCPEN--AAYYGNRSACYM 252
+ P LAE++K GN YK K Y A+ Y EAI L ++ A YY NR+A YM
Sbjct: 17 QEPAELAEKQKAIGNAFYKEKKYAEAIKAYTEAIDLGSDSALAIYYSNRAATYM 70
Score = 32.7 bits (71), Expect = 0.042
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Frame = +1
Query: 118 EEKKDSGNYLYKFKNYKGALAMYDEAIKLCPEN----AAYYGNRS 240
E K+ GN L++ NY+ A Y EA+++ P+N A Y NR+
Sbjct: 224 ENTKNQGNDLFRQGNYQDAYEKYSEALQIDPDNKETVAKLYMNRA 268
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 44.0 bits (99), Expect = 2e-05
Identities = 21/46 (45%), Positives = 27/46 (58%)
Frame = +1
Query: 112 LAEEKKDSGNYLYKFKNYKGALAMYDEAIKLCPENAAYYGNRSACY 249
+AEE K GN + K+YK A+ + +AI L N Y NRSACY
Sbjct: 1 MAEELKAKGNAAFSKKDYKTAIDYFTQAIGLDERNHILYSNRSACY 46
Score = 38.7 bits (86), Expect = 6e-04
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +1
Query: 115 AEEKKDSGNYLYKFKNYKGALAMYDEAIKLCPENAAYYGNRSACYM 252
AEE + GN L+K ++ A+ Y E K P + +GNR+A Y+
Sbjct: 399 AEESRVKGNELFKSGDFANAIKEYTEMTKRAPSDPRGFGNRAAAYL 444
Score = 36.3 bits (80), Expect = 0.003
Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 270 KALEDAQKAVSLDPTFTKGYIRAAKCCIALGDLLNGEQTVQRATELGGVECVSGE-LRAL 446
+ + D KA+ LDP F K Y+R A+ L D A+E+ E +G+ LR +
Sbjct: 451 ECIRDCNKAIELDPNFAKAYVRKAQALFMLKDYNKCIDACNEASEVDRREPNTGKNLREI 510
Query: 447 ET 452
E+
Sbjct: 511 ES 512
Score = 31.5 bits (68), Expect = 0.096
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +3
Query: 264 YKKALEDAQKAVSLDPTFTKGYIRAAKCCIALGDL 368
Y AL+DA K L P + KG+ R LGDL
Sbjct: 52 YADALKDATKCTELKPDWAKGWSRKGAALHGLGDL 86
>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 41.1 bits (92), Expect = 1e-04
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +1
Query: 115 AEEKKDSGNYLYKFKNYKGALAMYDEAIKLCPENAAYYGNRSACY 249
AE+ K GN K+Y+ AL +Y +AI++ P + YY NR+A Y
Sbjct: 83 AEKLKLEGNNAIAAKDYQKALDLYTKAIEIDPTSPVYYSNRAAAY 127
Score = 30.3 bits (65), Expect = 0.22
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = +3
Query: 249 HDLCMYKKALEDAQKAVSLDPTFTKGYIRAAKCCIALGD 365
+ L ++ A+EDA +SLDP + + R + ++LGD
Sbjct: 128 NQLGQFENAVEDALTCLSLDPHHARAFGRLGRAKLSLGD 166
Score = 25.8 bits (54), Expect = 4.8
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = +3
Query: 264 YKKALEDAQKAVSLDPTFTKGYIRAAKCCIALGDLLN 374
Y+KAL+ KA+ +DPT Y A LG N
Sbjct: 99 YQKALDLYTKAIEIDPTSPVYYSNRAAAYNQLGQFEN 135
>SPAC6B12.12 |tom70||mitochondrial TOM complex subunit
Tom70|Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 39.9 bits (89), Expect = 3e-04
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +1
Query: 112 LAEEKKDSGNYLYKFKNYKGALAMYDEAIKLCPENAAYYGNRSACYMIYACIRRLLK 282
LA E K GN Y K Y A+ Y +AI C + ++ NR+ACY +++K
Sbjct: 150 LAAELKTLGNKAYGQKEYANAIDYYTQAIT-CSHDPIFFSNRAACYAAIGDFEQVIK 205
>SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 358
Score = 35.5 bits (78), Expect = 0.006
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Frame = +1
Query: 103 PESLAEEKKDSGNYLYKFKNYKGALAMYDEAI-KLCPEN---AAYYGNRSACYMIYACIR 270
P +A+ ++ GN + K YK A Y +A+ + C + A Y NR+AC +++ R
Sbjct: 60 PHEVAQNFREHGNECFASKRYKDAEEFYTKALAQKCGDKDIEIACYSNRAACNLLFENYR 119
Query: 271 RLL 279
++L
Sbjct: 120 QVL 122
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 32.7 bits (71), Expect = 0.042
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 264 YKKALEDAQKAVSLDPTFTKGYIRAAKCCIAL 359
Y A+ DA KA+ DP + K Y R A IA+
Sbjct: 55 YGLAINDASKAIECDPEYAKAYFRRATAHIAI 86
>SPAC694.02 |||DEAD/DEAH box helicase|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1717
Score = 30.7 bits (66), Expect = 0.17
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +1
Query: 97 KSPESLAEEKKDSGNYLYKFKNYKGALAMYDEAIKLCPENAAYYGNRSACYMI 255
+S ES+ +YL KF + ++ + D A+ CP NA+ SA +++
Sbjct: 201 RSSESVENASNLISDYLKKFGKPRQSIELPDIAVDACPSNASRIQTLSAAWLL 253
>SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1389
Score = 29.5 bits (63), Expect = 0.39
Identities = 11/39 (28%), Positives = 23/39 (58%)
Frame = +3
Query: 291 KAVSLDPTFTKGYIRAAKCCIALGDLLNGEQTVQRATEL 407
+++S+DP ++ ++ A C IA+G + Q + A E+
Sbjct: 989 RSISIDPDNSQAWLGKAYCSIAVGSIRKAVQIIHHAFEI 1027
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 26.2 bits (55), Expect = 3.6
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 97 KSPESLAEEKKDSGNYLYKFKNYKGALA 180
++ E L EEK D + LY+F+ Y+ +A
Sbjct: 265 RNVEILKEEKNDLESKLYRFEEYRDKVA 292
>SPBC577.15c |||NASP family histone binding
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 396
Score = 26.2 bits (55), Expect = 3.6
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 94 PKSPESLA-EEKKDSGNYLYKFKNYKGALAMYDEAI 198
P S +S A E+ GN Y KNY+ A+ Y +A+
Sbjct: 24 PSSSDSRAIEQLVTQGNMAYAQKNYEEAVDKYGQAL 59
>SPAC4G8.09 |||mitochondrial leucine-tRNA ligase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 874
Score = 25.8 bits (54), Expect = 4.8
Identities = 19/52 (36%), Positives = 23/52 (44%)
Frame = +1
Query: 148 YKFKNYKGALAMYDEAIKLCPENAAYYGNRSACYMIYACIRRLLKMHRKLYH 303
Y+ K YK M +A L ENAA SA Y I+ KM + YH
Sbjct: 91 YRMKGYKVIHPMGWDAFGLPAENAAIENGISASSWTYENIK---KMKEQTYH 139
>SPBC16E9.08 |mcp4|mug101|sequence orphan|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 355
Score = 25.8 bits (54), Expect = 4.8
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = +2
Query: 311 NIHQRIHTGCEMLYCVRRSIK 373
+IH R E +YC+RR IK
Sbjct: 124 HIHNRRLCWAEFIYCIRRGIK 144
>SPCC1672.09 |||triglyceride lipase-cholesterol esterase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 467
Score = 25.4 bits (53), Expect = 6.3
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +2
Query: 122 KKKTVVIIYISLKITKEHWPCMMKPLNC 205
KK VV + L + E W C + P NC
Sbjct: 124 KKLPVVYCHHGLLMNSEVWVCNVDPRNC 151
>SPBC947.11c |elg1||DNA replication factor C complex subunit
Elg1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 920
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -1
Query: 463 NRLSVSNARNSPLTHSTPPNSVAR 392
N LS + NS +T TPPNS+ R
Sbjct: 818 NILSFLSFANSQVTSYTPPNSIDR 841
>SPAC2G11.05c |||BRO1 domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 701
Score = 25.4 bits (53), Expect = 6.3
Identities = 20/67 (29%), Positives = 29/67 (43%)
Frame = +3
Query: 291 KAVSLDPTFTKGYIRAAKCCIALGDLLNGEQTVQRATELGGVECVSGELRALETLKRLHE 470
+A SLD K CC AL +++N ++ Q E G V + LK E
Sbjct: 424 EASSLDCLIDKVNGTYRHCCQALDEIINSVKSSQNMKEKGFYSDVIKLHEEVSLLKVNVE 483
Query: 471 DAQRALD 491
++Q A D
Sbjct: 484 NSQNAKD 490
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 25.0 bits (52), Expect = 8.3
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 145 LYKFKNYKGALAMYDEAIKLCPENA 219
L + K Y A+ YD+AIK P+NA
Sbjct: 644 LKRQKLYIKAIQSYDQAIKFDPKNA 668
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,298,256
Number of Sequences: 5004
Number of extensions: 45014
Number of successful extensions: 153
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 140
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 152
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 258201856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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