Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00581
         (629 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q55AT1 Cluster: BEACH domain-containing protein; n=5; E...    36   0.61 
UniRef50_A7R0A8 Cluster: Chromosome undetermined scaffold_301, w...    33   4.3  
UniRef50_Q23JJ8 Cluster: Putative uncharacterized protein; n=4; ...    33   7.5  

>UniRef50_Q55AT1 Cluster: BEACH domain-containing protein; n=5;
           Eukaryota|Rep: BEACH domain-containing protein -
           Dictyostelium discoideum AX4
          Length = 3633

 Score = 36.3 bits (80), Expect = 0.61
 Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 3/125 (2%)
 Frame = +2

Query: 128 NKLYTLSTQDAITKKKR---KIIKQYFTIFLKSKTPPRRSGVLLISQNLVSILGLNNLKI 298
           N+   L   D +  K R     +K+Y  +F KS+ P   S VLL+SQ+L  +L    +  
Sbjct: 203 NRRMILDMMDVLLTKNRISLNELKEYCNLF-KSELP---STVLLVSQHLTELLTKGKVSC 258

Query: 299 EI*GLEGFLRGRKMGNLITEFFVQTYTLKLGENVLVHN*LSLIGKFLKVELNKQQNNMTT 478
           ++ G     R   +   + EF V   T     ++L+ N   L   F  +  N   NN ++
Sbjct: 259 DVLG-----RDLSLTQKLLEFLVNDPTTLRFSSILLQNETELQLCFSILSTNNNNNNSSS 313

Query: 479 KMF*N 493
           K + N
Sbjct: 314 KYYSN 318


>UniRef50_A7R0A8 Cluster: Chromosome undetermined scaffold_301,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome undetermined scaffold_301, whole genome
           shotgun sequence - Vitis vinifera (Grape)
          Length = 1094

 Score = 33.5 bits (73), Expect = 4.3
 Identities = 16/37 (43%), Positives = 23/37 (62%)
 Frame = +2

Query: 158 AITKKKRKIIKQYFTIFLKSKTPPRRSGVLLISQNLV 268
           AI KKKR+ + +     L+SK+PP  SG+  IS  L+
Sbjct: 99  AILKKKREFLSELLVRVLRSKSPPAASGLKCISHLLM 135


>UniRef50_Q23JJ8 Cluster: Putative uncharacterized protein; n=4;
            Alveolata|Rep: Putative uncharacterized protein -
            Tetrahymena thermophila SB210
          Length = 2427

 Score = 32.7 bits (71), Expect = 7.5
 Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
 Frame = +2

Query: 248  LISQNLVSILGLNNLKIEI*GLEGFL-RGRKMGNLITEFFVQTYTLKLGENVLVHN*LSL 424
            L+S N+     +NNLK+E   L+  + + R    L   F  +  T+K   N  + N +++
Sbjct: 1837 LLSMNIAIKENINNLKVENALLQKTINKQRNKLKLAKLFETKQSTMKTFSNTKISNPVNI 1896

Query: 425  IGKFLKVELNKQQN 466
            + K  K+++ KQ+N
Sbjct: 1897 LQKQKKIKMEKQRN 1910


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 496,123,593
Number of Sequences: 1657284
Number of extensions: 8836376
Number of successful extensions: 19516
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19493
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 46466611856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)