Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00581
         (629 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase rever...    21   8.5  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   8.5  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   8.5  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   8.5  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   8.5  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   8.5  

>DQ494421-1|ABF55372.1|   73|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 73

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = -2

Query: 526 LNSKFINLFSLILKHFR 476
           +NSK+ ++ ++ LK+FR
Sbjct: 19  VNSKYNSILNIALKNFR 35


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = -2

Query: 526 LNSKFINLFSLILKHFR 476
           +NSK+ ++ ++ LK+FR
Sbjct: 19  VNSKYNSILNIALKNFR 35


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +2

Query: 281 LNNLKIEI*GLEGFLRGRKMGNLITEFFVQTYTLKLG 391
           L NLK++      F+    +  LI  ++   +TL LG
Sbjct: 90  LENLKLDRENNSSFVVANVLFQLIHVYYTVVFTLLLG 126


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +2

Query: 281 LNNLKIEI*GLEGFLRGRKMGNLITEFFVQTYTLKLG 391
           L NLK++      F+    +  LI  ++   +TL LG
Sbjct: 90  LENLKLDRENNSSFVVANVLFQLIHVYYTVVFTLLLG 126


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 10/39 (25%), Positives = 21/39 (53%)
 Frame = -1

Query: 434 ISRLTIVSYVLIHFLLILRCMFAQKTR*LSYPSYVLARI 318
           IS L I+SY  +HF+  +  +F  +     +  ++++ I
Sbjct: 202 ISFLLIISYSTLHFVNYIDDLFFFRFEKSKFEPFLISNI 240


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +2

Query: 281 LNNLKIEI*GLEGFLRGRKMGNLITEFFVQTYTLKLG 391
           L NLK++      F+    +  LI  ++   +TL LG
Sbjct: 410 LENLKLDRENNSSFVVANVLFQLIHVYYTVVFTLLLG 446


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,049
Number of Sequences: 336
Number of extensions: 2836
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)