Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00579X
         (338 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   0.28 
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    24   0.37 
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    23   0.85 
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    22   1.5  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    22   1.5  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    22   1.5  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    22   2.0  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    22   2.0  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   2.6  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   2.6  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   3.4  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   3.4  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    20   8.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      20   8.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      20   8.0  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 0.28
 Identities = 10/34 (29%), Positives = 17/34 (50%)
 Frame = -3

Query: 159 LPLLADLVDIILVSARDLHGLRAAREGHGARLQH 58
           LP L  ++D + V   D HG    + GH   +++
Sbjct: 819 LPALGTVLDFMSVMTYDYHGAWERQTGHNFTMEY 852



 Score = 24.6 bits (51), Expect = 0.28
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -3

Query: 159  LPLLADLVDIILVSARDLHGLRAAREGHGARLQH 58
            +P+LA  +D + V   D HG    + GH A L +
Sbjct: 1575 VPVLAQNLDWVAVMTYDFHGQWDKQTGHVAPLYY 1608



 Score = 23.4 bits (48), Expect = 0.65
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = -3

Query: 159  LPLLADLVDIILVSARDLHGLRAAREGHGARLQH 58
            +P L+  +D I V   D HG    + GH A L +
Sbjct: 2498 VPALSQYLDWIAVMTYDFHGHWDKQTGHVAPLYY 2531



 Score = 21.0 bits (42), Expect = 3.4
 Identities = 12/29 (41%), Positives = 13/29 (44%)
 Frame = -3

Query: 150 LADLVDIILVSARDLHGLRAAREGHGARL 64
           L  LVD I + A D H  R     H A L
Sbjct: 353 LGSLVDFINLQAFDFHREREPVADHHANL 381



 Score = 21.0 bits (42), Expect = 3.4
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = -3

Query: 159  LPLLADLVDIILVSARDLHGLRAAREGHGARLQHEQLGAD 40
            +P L+  +D I V   D HG      GH A +      AD
Sbjct: 2000 VPTLSKYLDWIAVMCYDYHGQWDKITGHVAPMYAHPEDAD 2039


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 24.2 bits (50), Expect = 0.37
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 159 LPLLADLVDIILVSARDLHGLRAAREGHGARL 64
           +P ++  +D I + A D HG      GH A L
Sbjct: 264 VPAVSSYLDFINLMAYDFHGKWERETGHNAPL 295



 Score = 21.0 bits (42), Expect = 3.4
 Identities = 10/32 (31%), Positives = 15/32 (46%)
 Frame = -3

Query: 159 LPLLADLVDIILVSARDLHGLRAAREGHGARL 64
           +P ++  +D I V   D HG      GH + L
Sbjct: 693 VPEISKYLDFINVMTYDFHGQWERTVGHNSPL 724


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 23.0 bits (47), Expect = 0.85
 Identities = 13/32 (40%), Positives = 17/32 (53%)
 Frame = -3

Query: 159 LPLLADLVDIILVSARDLHGLRAAREGHGARL 64
           +P L+  +DII V A DL G      GH + L
Sbjct: 192 VPALSKYLDIINVMAYDLRGSWDGVTGHHSGL 223


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 22.2 bits (45), Expect = 1.5
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -3

Query: 150 LADLVDIILVSARDLHGLRAAREGHGARLQHEQL 49
           +A+ +D+I V A D HG      GH A L    L
Sbjct: 196 VAENLDMINVMAYDFHGAFEPFVGHYAPLYASHL 229


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 1.5
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -3

Query: 150 LADLVDIILVSARDLHGLRAAREGHGARLQHEQL 49
           +A+ +D+I V A D HG      GH A L    L
Sbjct: 197 VAENLDMINVMAYDFHGAFEPFVGHYAPLYASHL 230


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 22.2 bits (45), Expect = 1.5
 Identities = 13/34 (38%), Positives = 17/34 (50%)
 Frame = -3

Query: 150 LADLVDIILVSARDLHGLRAAREGHGARLQHEQL 49
           +A+ +D+I V A D HG      GH A L    L
Sbjct: 197 VAENLDMINVMAYDFHGAFEPFVGHYAPLYASHL 230


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +1

Query: 115 CRHQDNVYKVGEKWKSPTDVCETYECAADGDGK 213
           C +++  Y+   +W S  + C T  C  +G+ K
Sbjct: 673 CFYENKFYRQEAQWTSSDNPCTTCFC-ENGNNK 704


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.8 bits (44), Expect = 2.0
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -3

Query: 159 LPLLADLVDIILVSARDLHG 100
           +P +++++D+I V   D HG
Sbjct: 186 VPAMSNVLDVINVMTYDFHG 205


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -3

Query: 159 LPLLADLVDIILVSARDLHGLRA 91
           +P +++++DII V   D H + A
Sbjct: 187 IPAMSNVLDIINVMTYDFHAMWA 209


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 2.6
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +1

Query: 157 KSPTDVCETYECAADGDGKLQRLAAVQRCDRH 252
           + P+D    Y C +DG     +L ++QR   H
Sbjct: 450 RDPSDCSVYYTCVSDG----SKLVSIQRKCNH 477


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 151 KWKSPTDVCETYECAADGDGKLQ 219
           KW    DVCE +  A  G G +Q
Sbjct: 37  KWSDIADVCERF-LAPKGFGGVQ 58


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = +3

Query: 276 PAEADSGQCCGKCEPVACVVD 338
           P +  +G+C  +C   AC  D
Sbjct: 494 PVKRGNGRCDEECNTYACEFD 514



 Score = 19.8 bits (39), Expect = 8.0
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +1

Query: 175 CETYECAADGD 207
           C TY C  DG+
Sbjct: 506 CNTYACEFDGN 516


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +3

Query: 264 WKYVPAEADSGQCCGKCE 317
           W   P   D+  C G+CE
Sbjct: 288 WIVAPLGYDAYYCGGECE 305


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -2

Query: 325 ATGSHLPQHWPLSASAG 275
           A   H P  +PLS  AG
Sbjct: 185 AASWHTPSMYPLSPGAG 201


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 19.8 bits (39), Expect = 8.0
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -2

Query: 325 ATGSHLPQHWPLSASAG 275
           A   H P  +PLS  AG
Sbjct: 77  AASWHTPSMYPLSPGAG 93


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,199
Number of Sequences: 336
Number of extensions: 1065
Number of successful extensions: 26
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6558670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)