Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00578X
(552 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 152 2e-37
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 150 5e-37
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 149 9e-37
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 60 7e-10
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 60 7e-10
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 60 1e-09
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 60 1e-09
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 59 2e-09
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 59 2e-09
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 57 9e-09
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 57 9e-09
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 54 6e-08
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 54 8e-08
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 54 8e-08
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 54 8e-08
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 54 8e-08
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 54 8e-08
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 53 1e-07
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 52 2e-07
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 52 3e-07
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 52 3e-07
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 52 3e-07
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 51 4e-07
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 51 4e-07
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 50 8e-07
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 50 8e-07
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 50 8e-07
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 50 8e-07
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 50 1e-06
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 50 1e-06
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 50 1e-06
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 50 1e-06
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 49 2e-06
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 49 2e-06
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 49 2e-06
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 49 2e-06
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 49 2e-06
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 49 2e-06
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 49 2e-06
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 48 3e-06
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 48 3e-06
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 48 4e-06
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 48 4e-06
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 48 4e-06
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 48 6e-06
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 48 6e-06
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 48 6e-06
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 48 6e-06
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 47 1e-05
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 47 1e-05
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 46 1e-05
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 46 2e-05
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 46 2e-05
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 46 2e-05
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 45 3e-05
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 45 3e-05
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 45 4e-05
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 45 4e-05
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 45 4e-05
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 44 5e-05
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 44 5e-05
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 44 5e-05
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 44 5e-05
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 44 7e-05
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 44 7e-05
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 44 7e-05
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 44 7e-05
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 44 9e-05
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 44 9e-05
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 44 9e-05
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 44 9e-05
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 43 1e-04
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 43 1e-04
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 43 1e-04
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 43 1e-04
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 43 1e-04
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 43 1e-04
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 43 2e-04
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 43 2e-04
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 42 2e-04
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 42 2e-04
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 42 2e-04
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 42 2e-04
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 42 3e-04
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 42 4e-04
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 42 4e-04
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 42 4e-04
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 41 5e-04
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 41 5e-04
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 41 5e-04
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 41 6e-04
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 41 6e-04
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 41 6e-04
At3g50390.1 68416.m05512 transducin family protein / WD-40 repea... 40 8e-04
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 40 8e-04
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 40 0.001
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 40 0.001
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 40 0.001
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 40 0.001
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 39 0.002
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 39 0.002
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 39 0.002
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 38 0.003
At4g34380.1 68417.m04884 transducin family protein / WD-40 repea... 38 0.003
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 38 0.003
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 38 0.003
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 38 0.004
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 38 0.004
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 38 0.004
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 38 0.004
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 38 0.004
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 38 0.004
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 38 0.004
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 38 0.004
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 38 0.006
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 38 0.006
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 37 0.008
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 37 0.010
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 37 0.010
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 37 0.010
At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat fam... 37 0.010
At4g38480.1 68417.m05438 transducin family protein / WD-40 repea... 37 0.010
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 36 0.014
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 36 0.014
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 36 0.014
At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pf... 36 0.018
At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pf... 36 0.018
At1g80710.1 68414.m09470 transducin family protein / WD-40 repea... 36 0.018
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 36 0.024
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 36 0.024
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 36 0.024
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 35 0.031
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 35 0.031
At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 ... 35 0.042
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 34 0.055
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 34 0.055
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 34 0.055
At3g13300.2 68416.m01675 transducin family protein / WD-40 repea... 34 0.055
At3g13300.1 68416.m01674 transducin family protein / WD-40 repea... 34 0.055
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 34 0.055
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 34 0.055
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 34 0.073
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 34 0.073
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 34 0.073
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 34 0.073
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 33 0.096
At3g45620.1 68416.m04927 transducin family protein / WD-40 repea... 33 0.096
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 33 0.096
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 33 0.13
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 33 0.13
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 33 0.13
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 33 0.13
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 33 0.13
At1g76260.1 68414.m08855 transducin family protein / WD-40 repea... 33 0.13
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 33 0.13
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 33 0.13
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 33 0.17
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 33 0.17
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 33 0.17
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 33 0.17
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 33 0.17
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 32 0.22
At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10... 32 0.22
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 32 0.22
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 32 0.22
At1g15850.1 68414.m01902 transducin family protein / WD-40 repea... 32 0.22
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 32 0.29
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 32 0.29
At4g34280.1 68417.m04873 transducin family protein / WD-40 repea... 32 0.29
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 32 0.29
At2g25420.1 68415.m03045 transducin family protein / WD-40 repea... 32 0.29
At4g11270.1 68417.m01823 transducin family protein / WD-40 repea... 31 0.39
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 31 0.51
At1g03110.1 68414.m00288 transducin family protein / WD-40 repea... 31 0.51
At4g29380.1 68417.m04197 protein kinase family protein / WD-40 r... 31 0.68
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 31 0.68
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 31 0.68
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 31 0.68
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 30 0.89
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 30 0.89
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 30 0.89
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 30 1.2
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 30 1.2
At4g21130.1 68417.m03055 transducin family protein / WD-40 repea... 30 1.2
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 30 1.2
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 30 1.2
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 30 1.2
At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 ... 29 1.6
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 29 1.6
At1g18830.1 68414.m02345 transducin family protein / WD-40 repea... 29 1.6
At5g61560.1 68418.m07725 protein kinase family protein contains ... 29 2.1
At5g05970.1 68418.m00661 transducin family protein / WD-40 repea... 29 2.1
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 29 2.1
At3g09080.1 68416.m01067 transducin family protein / WD-40 repea... 29 2.1
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 29 2.1
At5g45760.2 68418.m05626 transducin family protein / WD-40 repea... 29 2.7
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 29 2.7
At5g14050.1 68418.m01644 transducin family protein / WD-40 repea... 29 2.7
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 29 2.7
At1g51690.2 68414.m05825 serine/threonine protein phosphatase 2A... 29 2.7
At1g51690.1 68414.m05824 serine/threonine protein phosphatase 2A... 29 2.7
At5g60050.1 68418.m07530 PRLI-interacting factor-related contain... 28 3.6
At4g01860.2 68417.m00244 transducin family protein / WD-40 repea... 28 3.6
At4g01860.1 68417.m00243 transducin family protein / WD-40 repea... 28 3.6
At1g13030.1 68414.m01511 sphere organelles protein-related conta... 28 3.6
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 28 4.8
At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetica... 28 4.8
At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetica... 28 4.8
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 28 4.8
At1g26330.1 68414.m03211 hypothetical protein 28 4.8
At4g03970.1 68417.m00561 Ulp1 protease family protein contains P... 27 6.3
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 27 6.3
At5g04560.1 68418.m00456 DEMETER protein (DME) identical to DEME... 27 8.3
At1g17720.2 68414.m02194 serine/threonine protein phosphatase 2A... 27 8.3
At1g17720.1 68414.m02193 serine/threonine protein phosphatase 2A... 27 8.3
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 27 8.3
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 152 bits (368), Expect = 2e-37
Identities = 71/94 (75%), Positives = 79/94 (84%), Gaps = 3/94 (3%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 435
SSDG +ALSGSWD LRLWDLA G+TTRRF HTKDVLSVAFS DNRQIVS+SRD+TIKL
Sbjct: 72 SSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKL 131
Query: 436 WNTLAECKYTIQD-DGHSDWVSCVRSHP--IMPT 528
WNTL ECKYTI + DGH +WVSCVR P ++PT
Sbjct: 132 WNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPT 165
Score = 85.0 bits (201), Expect = 3e-17
Identities = 37/70 (52%), Positives = 53/70 (75%)
Frame = +2
Query: 44 MSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY 223
M+E L L+G +R H VT IAT D+I+++SRDK++I+WKLT+D+ +YG+ Q+RL
Sbjct: 1 MAEGLVLKGIMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLT 60
Query: 224 GHSHFISDVV 253
GHSHF+ DVV
Sbjct: 61 GHSHFVEDVV 70
Score = 48.4 bits (110), Expect = 3e-06
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWD-LAAGK-TTRRFEDHTKDVLSVAFSVDNR--QIVSSSRDK 423
S+D +S S D+T++LW+ L K T + H + V V FS + IVS+S DK
Sbjct: 114 STDNRQIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDK 173
Query: 424 TIKLWNTLAECKYTIQDDGHSDWVSCVRSHP 516
T+K+WN L CK GHS +++ V P
Sbjct: 174 TVKVWN-LQNCKLRNSLVGHSGYLNTVAVSP 203
Score = 42.3 bits (95), Expect = 2e-04
Identities = 23/61 (37%), Positives = 33/61 (54%)
Frame = +1
Query: 277 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAEC 456
+S SWDKT+++W+L K H+ + +VA S D S +D I LW+ LAE
Sbjct: 167 VSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWD-LAEG 225
Query: 457 K 459
K
Sbjct: 226 K 226
Score = 38.3 bits (85), Expect = 0.003
Identities = 24/73 (32%), Positives = 39/73 (53%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 435
S DG+ SG D + LWDLA GK E + + S+ FS NR + ++ + +I++
Sbjct: 202 SPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGS-IIHSLCFS-PNRYWLCAATENSIRI 259
Query: 436 WNTLAECKYTIQD 474
W+ E K ++D
Sbjct: 260 WD--LESKSVVED 270
Score = 34.7 bits (76), Expect = 0.042
Identities = 14/52 (26%), Positives = 28/52 (53%)
Frame = +2
Query: 50 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI 205
+ KLR +L GH+G++ +A +P + S +D +++W L + Y +
Sbjct: 181 QNCKLRNSLVGHSGYLNTVAVSPD-GSLCASGGKDGVILLWDLAEGKKLYSL 231
Score = 32.7 bits (71), Expect = 0.17
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Frame = +1
Query: 352 HTKDVLSVAFSVDNRQI-VSSSRDKTIKLWNTLAECK-YTIQD---DGHSDWVSCV 504
HT V ++A +DN I V++SRDK+I LW + K Y + GHS +V V
Sbjct: 14 HTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRLTGHSHFVEDV 69
Score = 30.3 bits (65), Expect = 0.89
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 80 GHNGWVTQIATNPK-YPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 250
GH WV+ + +P I+S+S DKT+ VW L N + + L GHS +++ V
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL----QNCKL-RNSLVGHSGYLNTV 199
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 150 bits (364), Expect = 5e-37
Identities = 70/94 (74%), Positives = 79/94 (84%), Gaps = 3/94 (3%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 435
SSDG +ALSGSWD LRLWDLA G++TRRF HTKDVLSVAFS DNRQIVS+SRD+TIKL
Sbjct: 72 SSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKL 131
Query: 436 WNTLAECKYTIQD-DGHSDWVSCVRSHP--IMPT 528
WNTL ECKYTI + DGH +WVSCVR P ++PT
Sbjct: 132 WNTLGECKYTISEADGHKEWVSCVRFSPNTLVPT 165
Score = 84.2 bits (199), Expect = 5e-17
Identities = 36/70 (51%), Positives = 53/70 (75%)
Frame = +2
Query: 44 MSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY 223
M+E L L+GT+ H VT IAT D+I++SSRDK++I+WKLT+++ +YG+ Q+R+
Sbjct: 1 MAEGLVLKGTMCAHTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMT 60
Query: 224 GHSHFISDVV 253
GHSHF+ DVV
Sbjct: 61 GHSHFVQDVV 70
Score = 48.8 bits (111), Expect = 2e-06
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWD-LAAGK-TTRRFEDHTKDVLSVAFSVDNR--QIVSSSRDK 423
S+D +S S D+T++LW+ L K T + H + V V FS + IVS+S DK
Sbjct: 114 STDNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDK 173
Query: 424 TIKLWNTLAECKYTIQDDGHSDWVSCVRSHP 516
T+K+WN L CK GHS +++ V P
Sbjct: 174 TVKVWN-LQNCKLRNTLAGHSGYLNTVAVSP 203
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/61 (37%), Positives = 33/61 (54%)
Frame = +1
Query: 277 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAEC 456
+S SWDKT+++W+L K H+ + +VA S D S +D I LW+ LAE
Sbjct: 167 VSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWD-LAEG 225
Query: 457 K 459
K
Sbjct: 226 K 226
Score = 38.3 bits (85), Expect = 0.003
Identities = 24/73 (32%), Positives = 39/73 (53%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 435
S DG+ SG D + LWDLA GK E + + S+ FS NR + ++ + +I++
Sbjct: 202 SPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGS-IIHSLCFS-PNRYWLCAATENSIRI 259
Query: 436 WNTLAECKYTIQD 474
W+ E K ++D
Sbjct: 260 WD--LESKSVVED 270
Score = 37.1 bits (82), Expect = 0.008
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +2
Query: 50 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI 205
+ KLR TL GH+G++ +A +P + S +D +++W L + Y +
Sbjct: 181 QNCKLRNTLAGHSGYLNTVAVSPD-GSLCASGGKDGVILLWDLAEGKKLYSL 231
Score = 35.5 bits (78), Expect = 0.024
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Frame = +1
Query: 352 HTKDVLSVAFSVDNRQ-IVSSSRDKTIKLWNTLAECK-YTIQD---DGHSDWVSCV 504
HT V ++A VDN IV+SSRDK+I LW E K Y + GHS +V V
Sbjct: 14 HTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRMTGHSHFVQDV 69
Score = 29.9 bits (64), Expect = 1.2
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 80 GHNGWVTQIATNPK-YPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 250
GH WV+ + +P I+S+S DKT+ VW L N + + L GHS +++ V
Sbjct: 147 GHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNL----QNCKL-RNTLAGHSGYLNTV 199
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 149 bits (362), Expect = 9e-37
Identities = 71/95 (74%), Positives = 79/95 (83%), Gaps = 4/95 (4%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 435
SSDG +ALSGSWD LRLWDLAAG +TRRF HTKDVLSVAFS+DNRQIVS+SRD+TIKL
Sbjct: 72 SSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKL 131
Query: 436 WNTLAECKYTIQD--DGHSDWVSCVRSHP--IMPT 528
WNTL ECKYTI + +GH DWVSCVR P + PT
Sbjct: 132 WNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPT 166
Score = 88.2 bits (209), Expect = 3e-18
Identities = 39/70 (55%), Positives = 53/70 (75%)
Frame = +2
Query: 44 MSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLY 223
M+E L L+GT+R H VT IAT D+I+S+SRDK++I+WKLT+D+ YG+ Q+RL
Sbjct: 1 MAEGLVLKGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLT 60
Query: 224 GHSHFISDVV 253
GHSHF+ DVV
Sbjct: 61 GHSHFVEDVV 70
Score = 50.8 bits (116), Expect = 6e-07
Identities = 37/92 (40%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWD-LAAGKTT--RRFEDHTKDVLSVAFSVDNRQ--IVSSSRD 420
S D +S S D+T++LW+ L K T E H V V FS + Q IVS+S D
Sbjct: 114 SLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWD 173
Query: 421 KTIKLWNTLAECKYTIQDDGHSDWVSCVRSHP 516
KT+K+WN L+ CK GH+ +VS V P
Sbjct: 174 KTVKVWN-LSNCKLRSTLAGHTGYVSTVAVSP 204
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/61 (39%), Positives = 34/61 (55%)
Frame = +1
Query: 277 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAEC 456
+S SWDKT+++W+L+ K HT V +VA S D S +D + LW+ LAE
Sbjct: 168 VSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWD-LAEG 226
Query: 457 K 459
K
Sbjct: 227 K 227
Score = 37.5 bits (83), Expect = 0.006
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +2
Query: 59 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGI 205
KLR TL GH G+V+ +A +P + S +D +++W L + Y +
Sbjct: 185 KLRSTLAGHTGYVSTVAVSPD-GSLCASGGKDGVVLLWDLAEGKKLYSL 232
Score = 37.5 bits (83), Expect = 0.006
Identities = 24/73 (32%), Positives = 39/73 (53%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 435
S DG+ SG D + LWDLA GK E ++ + ++ FS NR + ++ + IK+
Sbjct: 203 SPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSV-IHALCFS-PNRYWLCAATEHGIKI 260
Query: 436 WNTLAECKYTIQD 474
W+ E K ++D
Sbjct: 261 WD--LESKSIVED 271
Score = 33.9 bits (74), Expect = 0.073
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Frame = +1
Query: 352 HTKDVLSVAFSVDNRQI-VSSSRDKTIKLWNTLAECK-YTIQD---DGHSDWVSCV 504
HT V ++A +DN I VS+SRDK+I LW + K Y + GHS +V V
Sbjct: 14 HTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDV 69
Score = 31.9 bits (69), Expect = 0.29
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +2
Query: 5 RFRESSLFKPFSKMSETLKLRGTLRGHNGWVTQIATNPK-YPDMILSSSRDKTLIVWKLT 181
R R L+ + T+ G GH WV+ + +P I+S+S DKT+ VW L+
Sbjct: 125 RDRTIKLWNTLGECKYTISEGG--EGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLS 182
Query: 182 RDENNYGIPQKRLYGHSHFISDV 250
+ + L GH+ ++S V
Sbjct: 183 NCK-----LRSTLAGHTGYVSTV 200
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 60.5 bits (140), Expect = 7e-10
Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +1
Query: 280 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTL-AEC 456
S SWD T+RLWD+ A K T H DVL+VAF D +Q+ SS+ D I W+T+
Sbjct: 494 SSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVL 553
Query: 457 KYTIQ 471
YTI+
Sbjct: 554 MYTIE 558
Score = 45.6 bits (103), Expect = 2e-05
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 435
S D +G+ D +++W++ +G F +HT V ++ F DN ++S+S D T++
Sbjct: 358 SPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRA 417
Query: 436 WN 441
W+
Sbjct: 418 WD 419
Score = 35.1 bits (77), Expect = 0.031
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = +1
Query: 253 ASSDGNYALSGSWDK-TLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 429
A G+ +G+ D + +W G+ H V + FS + + SSS D T+
Sbjct: 442 ADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTV 501
Query: 430 KLWNTLAECKYTIQDDGHSDWVSCVRSHP 516
+LW+ A K T++ H+ V V P
Sbjct: 502 RLWDVFAS-KGTVETFRHNHDVLTVAFRP 529
Score = 27.5 bits (58), Expect = 6.3
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 250 CASSDGNYALSGSWDKTLRLWDLAAGKTTRRFE 348
C S+DG Y L+ + + ++D+A RRF+
Sbjct: 588 CYSADGGYILAAGTSRYICMYDIADQVLLRRFQ 620
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 60.5 bits (140), Expect = 7e-10
Identities = 30/65 (46%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = +1
Query: 280 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTL-AEC 456
S SWD T+RLWD+ A K T H DVL+VAF D +Q+ SS+ D I W+T+
Sbjct: 534 SSSWDYTVRLWDVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWDTIEGVL 593
Query: 457 KYTIQ 471
YTI+
Sbjct: 594 MYTIE 598
Score = 45.6 bits (103), Expect = 2e-05
Identities = 18/62 (29%), Positives = 35/62 (56%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 435
S D +G+ D +++W++ +G F +HT V ++ F DN ++S+S D T++
Sbjct: 398 SPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRA 457
Query: 436 WN 441
W+
Sbjct: 458 WD 459
Score = 35.1 bits (77), Expect = 0.031
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 1/89 (1%)
Frame = +1
Query: 253 ASSDGNYALSGSWDK-TLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 429
A G+ +G+ D + +W G+ H V + FS + + SSS D T+
Sbjct: 482 ADPSGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTV 541
Query: 430 KLWNTLAECKYTIQDDGHSDWVSCVRSHP 516
+LW+ A K T++ H+ V V P
Sbjct: 542 RLWDVFAS-KGTVETFRHNHDVLTVAFRP 569
Score = 27.5 bits (58), Expect = 6.3
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 250 CASSDGNYALSGSWDKTLRLWDLAAGKTTRRFE 348
C S+DG Y L+ + + ++D+A RRF+
Sbjct: 628 CYSADGGYILAAGTSRYICMYDIADQVLLRRFQ 660
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 60.1 bits (139), Expect = 1e-09
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 435
S DG + S S+DK++RLW+ G+ F H V V++S D+R ++S S+D T+K+
Sbjct: 369 SPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKI 428
Query: 436 WNTLAECKYTIQD-DGHSDWVSCVRSHP 516
W K QD GH+D V V P
Sbjct: 429 WE--IRTKKLKQDLPGHADEVFAVDWSP 454
Score = 54.0 bits (124), Expect = 6e-08
Identities = 22/61 (36%), Positives = 36/61 (59%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 435
S+D LSGS D TL++W++ K + H +V +V +S D ++VS +D+ +KL
Sbjct: 411 SADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKL 470
Query: 436 W 438
W
Sbjct: 471 W 471
Score = 53.6 bits (123), Expect = 8e-08
Identities = 30/88 (34%), Positives = 41/88 (46%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 435
S DG SGS D T+RLWDL + H VL+VA+S D + +VS S+ I
Sbjct: 118 SPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLVSGSKSGEICC 177
Query: 436 WNTLAECKYTIQDDGHSDWVSCVRSHPI 519
WN GH W++ + P+
Sbjct: 178 WNPKKGELEGSPLTGHKKWITGISWEPV 205
Score = 43.6 bits (98), Expect = 9e-05
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +1
Query: 277 LSGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
+SGS D T+ LW+ + K + R H + V V FS D + I S+S DK+++LWN
Sbjct: 333 VSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWN 388
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/74 (31%), Positives = 36/74 (48%)
Frame = +1
Query: 277 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAEC 456
++ S D R+WD+ K+ HT V V + D I + S+D TIK+W T +
Sbjct: 215 VTSSKDGDARIWDITLKKSIICLSGHTLAVTCVKWGGDG-IIYTGSQDCTIKMWET-TQG 272
Query: 457 KYTIQDDGHSDWVS 498
K + GH W++
Sbjct: 273 KLIRELKGHGHWIN 286
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +2
Query: 77 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIP 208
RGH G V Q++ + ++LS S+D TL +W++ + +P
Sbjct: 399 RGHVGPVYQVSWSAD-SRLLLSGSKDSTLKIWEIRTKKLKQDLP 441
Score = 28.3 bits (60), Expect(2) = 0.064
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +2
Query: 125 PDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 250
P+ ++S S D T+ +W+ + + P+KRL GH ++ V
Sbjct: 329 PERLVSGSDDFTMFLWEPSVSKQ----PKKRLTGHQQLVNHV 366
Score = 27.9 bits (59), Expect = 4.8
Identities = 17/60 (28%), Positives = 28/60 (46%)
Frame = +2
Query: 71 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 250
T +GH WV +A +P ++ S S+ + W + E G P L GH +I+ +
Sbjct: 146 TCKGHKNWVLTVAWSPDGKHLV-SGSKSGEICCWNPKKGELE-GSP---LTGHKKWITGI 200
Score = 24.6 bits (51), Expect(2) = 0.064
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +2
Query: 41 KMSETL--KLRGTLRGHNGWVTQIATNPKY 124
KM ET KL L+GH W+ +A + +Y
Sbjct: 265 KMWETTQGKLIRELKGHGHWINSLALSTEY 294
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 60.1 bits (139), Expect = 1e-09
Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Frame = +1
Query: 268 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN-T 444
NY +GS DKT+RLWD+ G+ R F H VLS+A S D R + S D TI +W+ +
Sbjct: 512 NYIATGSSDKTVRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLS 571
Query: 445 LAECKYTIQDDGHSDWVSCVRS 510
A C + GH+ SCV S
Sbjct: 572 TARCITPLM--GHN---SCVWS 588
Score = 59.7 bits (138), Expect = 1e-09
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 435
S DG Y SG D T+ +WDL+ + H V S+++S + + S S D T+KL
Sbjct: 550 SPDGRYMASGDEDGTIMMWDLSTARCITPLMGHNSCVWSLSYSGEGSLLASGSADCTVKL 609
Query: 436 WNTLAECKYTIQDD--GHSDWVSCVRSHPIMPTPL 534
W+ + K T ++ G+S+ + +R+ P TP+
Sbjct: 610 WDVTSSTKLTKAEEKNGNSNRLRSLRTFPTKSTPV 644
Score = 40.3 bits (90), Expect = 8e-04
Identities = 19/62 (30%), Positives = 28/62 (45%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 435
S G++ LS S D T+RLW ++ H V FS S S D+T ++
Sbjct: 427 SPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARI 486
Query: 436 WN 441
W+
Sbjct: 487 WS 488
Score = 36.3 bits (80), Expect = 0.014
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +1
Query: 265 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNT 444
G+Y S S D+T R+W + + R H D V + + I + S DKT++LW+
Sbjct: 472 GHYFASCSHDRTARIWSMDRIQPLRIMAGHLSD---VDWHPNCNYIATGSSDKTVRLWDV 528
Query: 445 -LAEC 456
EC
Sbjct: 529 QTGEC 533
Score = 31.1 bits (67), Expect = 0.51
Identities = 14/31 (45%), Positives = 19/31 (61%)
Frame = +1
Query: 352 HTKDVLSVAFSVDNRQIVSSSRDKTIKLWNT 444
H+ V S FS ++SSS D TI+LW+T
Sbjct: 417 HSGPVYSATFSPPGDFVLSSSADTTIRLWST 447
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 74 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN 193
L GH+G V +P D +LSSS D T+ +W + N
Sbjct: 414 LLGHSGPVYSATFSPP-GDFVLSSSADTTIRLWSTKLNAN 452
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 59.3 bits (137), Expect = 2e-09
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 435
S+DGN S S DKT+ LW R+E H+ + +A+S D+ S+S D T+++
Sbjct: 52 SNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRI 111
Query: 436 WNTLA--ECKYTIQDDGHSDWVSCVRSHP 516
W+ + EC ++ GH+++V CV +P
Sbjct: 112 WDARSPYECLKVLR--GHTNFVFCVNFNP 138
Score = 58.4 bits (135), Expect = 3e-09
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Frame = +1
Query: 268 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTL 447
N +SGS+D+T+R+W++ GK R + H+ + SV F+ D IVS+S D + K+W+
Sbjct: 141 NLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAK 200
Query: 448 -AECKYTIQDD 477
C T+ DD
Sbjct: 201 EGTCLKTLIDD 211
Score = 53.2 bits (122), Expect = 1e-07
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSV--AFSVDN-RQIVSSSRDKT 426
S +G + L + D TL+L + A GK + + HT V + AFSV N + IVS S D
Sbjct: 222 SPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNC 281
Query: 427 IKLWNTLAECKYTIQDDGHSDWVSCVRSHPI 519
+ LW+ A + +GH+D V V HP+
Sbjct: 282 VYLWDLQAR-NILQRLEGHTDAVISVSCHPV 311
Score = 50.4 bits (115), Expect = 8e-07
Identities = 26/62 (41%), Positives = 36/62 (58%), Gaps = 2/62 (3%)
Frame = +1
Query: 259 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSR--DKTIK 432
++G Y +SGS D + LWDL A +R E HT V+SV+ +I SS DKTI+
Sbjct: 268 TNGKYIVSGSEDNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIR 327
Query: 433 LW 438
+W
Sbjct: 328 IW 329
Score = 46.8 bits (106), Expect = 1e-05
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 432
SSD +Y S S D TLR+WD + + + HT V V F+ + IVS S D+TI+
Sbjct: 94 SSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIR 153
Query: 433 LW 438
+W
Sbjct: 154 IW 155
Score = 41.5 bits (93), Expect = 4e-04
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA-FSVDNRQIVSSSRDKTIKLW 438
DG+ +S S D + ++WD G + D +S A FS + + I+ ++ D T+KL
Sbjct: 181 DGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSPNGKFILVATLDSTLKLS 240
Query: 439 NTLAECKYTIQDDGHSDWVSCVRS 510
N A K+ GH++ V C+ S
Sbjct: 241 N-YATGKFLKVYTGHTNKVFCITS 263
Score = 33.1 bits (72), Expect = 0.13
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +1
Query: 337 RRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECKYTIQDDGHSDWVS 498
+ E HT + V FS D + S+S DKT+ LW+ + +GHS +S
Sbjct: 37 KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSA-TNYSLIHRYEGHSSGIS 89
Score = 32.3 bits (70), Expect = 0.22
Identities = 29/97 (29%), Positives = 47/97 (48%)
Frame = +2
Query: 71 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 250
TL GH ++ + + +++ S+S DKT+I+W T NY + R GHS ISD+
Sbjct: 38 TLEGHTAAISCVKFSND-GNLLASASVDKTMILWSAT----NYSLIH-RYEGHSSGISDL 91
Query: 251 VRLVTVITHFPVLGTRLCVCGISLQARLPDDSRTILR 361
+ +H+ + C I AR P + +LR
Sbjct: 92 A--WSSDSHYTCSASDDCTLRI-WDARSPYECLKVLR 125
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 58.8 bits (136), Expect = 2e-09
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 435
SSD + +S S DKTL+LWD+ G + HT V F+ + IVS S D+T+++
Sbjct: 80 SSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRI 139
Query: 436 WN-TLAECKYTIQDDGHSDWVSCV 504
W+ T +C + HSD V+ V
Sbjct: 140 WDVTTGKCLKVL--PAHSDPVTAV 161
Score = 58.0 bits (134), Expect = 4e-09
Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Frame = +1
Query: 268 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNT- 444
N +SGS+D+T+R+WD+ GK + H+ V +V F+ D IVSSS D ++W++
Sbjct: 126 NMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSG 185
Query: 445 LAECKYTIQDDGHSDWVSCVRSHP 516
C T+ DD + VS VR P
Sbjct: 186 TGHCVKTLIDDENPP-VSFVRFSP 208
Score = 56.0 bits (129), Expect = 2e-08
Identities = 32/90 (35%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH--TKDVLSVAFSVDN-RQIVSSSRDKT 426
S +G + L G+ D TLRLW++++ K + + H + +S AFSV N ++IVS S D
Sbjct: 207 SPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNC 266
Query: 427 IKLWNTLAECKYTIQDDGHSDWVSCVRSHP 516
+ +W L K + +GH++ V V HP
Sbjct: 267 VHMWE-LNSKKLLQKLEGHTETVMNVACHP 295
Score = 54.4 bits (125), Expect = 5e-08
Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAA-----GKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRD 420
SSDG S S DKT+R + + + + F H + VAFS D R IVS+S D
Sbjct: 33 SSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARFIVSASDD 92
Query: 421 KTIKLWNTLAECKYTIQD-DGHSDWVSCVRSHP 516
KT+KLW+ E I+ GH+++ CV +P
Sbjct: 93 KTLKLWD--VETGSLIKTLIGHTNYAFCVNFNP 123
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/65 (33%), Positives = 37/65 (56%)
Frame = +1
Query: 259 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 438
++G +SGS D + +W+L + K ++ E HT+ V++VA I S S DKT+++W
Sbjct: 253 TNGKRIVSGSEDNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
Query: 439 NTLAE 453
E
Sbjct: 313 TQKKE 317
Score = 47.2 bits (107), Expect = 7e-06
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRR-FEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 438
DG+ +S S+D R+WD G + +D V V FS + + I+ + D T++LW
Sbjct: 166 DGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLW 225
Query: 439 NTLAECKYTIQDDGHSDWVSCVRS 510
N ++ K+ GH + C+ S
Sbjct: 226 N-ISSAKFLKTYTGHVNAQYCISS 248
Score = 31.5 bits (68), Expect = 0.39
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +2
Query: 50 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 181
ET L TL GH + + NP+ +MI+S S D+T+ +W +T
Sbjct: 101 ETGSLIKTLIGHTNYAFCVNFNPQ-SNMIVSGSFDETVRIWDVT 143
Score = 28.3 bits (60), Expect = 3.6
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +2
Query: 71 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDV 250
TL HN V+ + + ++ S+S DKT+ + + + P + GH + ISDV
Sbjct: 19 TLTSHNRAVSSVKFSSD-GRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 77
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 56.8 bits (131), Expect = 9e-09
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +1
Query: 277 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN-TLAE 453
++ S DKT+++W ++ G + FE HT VL +F D Q VS D +KLWN +E
Sbjct: 557 MTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTSE 616
Query: 454 CKYTIQDDGHSDWV 495
C T D H D V
Sbjct: 617 CIATY--DQHEDKV 628
Score = 52.0 bits (119), Expect = 3e-07
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Frame = +1
Query: 259 SDGNYALSGSWDKTLRLWDLAAGKTTRR----FEDHTKDVLSVAFSVDNRQIVSSSRDKT 426
S+ N +SGS D T+R+WDL A T ++ E H V S+A S D + S+ RDK
Sbjct: 156 SNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAGRDKV 215
Query: 427 IKLWNTL-AECKYTI 468
+ LW+ CK T+
Sbjct: 216 VNLWDLHDYSCKATV 230
Score = 49.2 bits (112), Expect = 2e-06
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Frame = +1
Query: 250 CASSDGNYAL-SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ-IVSSSRDK 423
C SS GN + +GS DKT+RLW+ + H D+L+VAF+ + VS S D+
Sbjct: 410 CVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSGDR 469
Query: 424 TIKLWN 441
T+K+W+
Sbjct: 470 TLKVWS 475
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/53 (32%), Positives = 31/53 (58%)
Frame = +1
Query: 280 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 438
+GS D+T +W L + H + + SV FS ++ ++++S DKT+K+W
Sbjct: 516 TGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIW 568
Score = 35.9 bits (79), Expect = 0.018
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Frame = +1
Query: 253 ASSDGNYALSGSWDKTLRLWDLAAG----------KTTRRFEDHTKDVLSVAFSVDNRQI 402
A ++ +SGS D+TL++W L KT H KD+ SVA + ++ +
Sbjct: 455 AKKSFSFFVSGSGDRTLKVWSLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLV 514
Query: 403 VSSSRDKTIKLWNTLAECKYTIQDDGH 483
+ S D+T +W L + + + GH
Sbjct: 515 CTGSEDRTASIWR-LPDLVHVVTLKGH 540
Score = 33.1 bits (72), Expect = 0.13
Identities = 15/61 (24%), Positives = 27/61 (44%)
Frame = +1
Query: 259 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 438
+DG +S D L+LW++ + ++ H V ++A I + D I LW
Sbjct: 593 TDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKVWALAVGKKTEMIATGGGDAVINLW 652
Query: 439 N 441
+
Sbjct: 653 H 653
Score = 32.7 bits (71), Expect = 0.17
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Frame = +1
Query: 301 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVD---NRQIVSSSRDKTIKLWNTLAE 453
+R++D+A + H + VLS+ V N IV+ S+DKT++LWN ++
Sbjct: 383 VRVYDVATMSCSYVLAGHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSK 436
Score = 30.3 bits (65), Expect = 0.89
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 68 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 178
G GHNG + +A K +S S D+TL VW L
Sbjct: 440 GVGTGHNGDILAVAFAKKSFSFFVSGSGDRTLKVWSL 476
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 56.8 bits (131), Expect = 9e-09
Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 7/133 (5%)
Frame = +1
Query: 142 FLSRQNSHRVEADQR----RKQLRYTSKAFIRSFALHF*CCA-SSDGNYALSGSWDKTLR 306
FLS+++ + +A R K +T +R+ CC SSDG S DK
Sbjct: 617 FLSQEDGDQRDAVTRCMDVSKGFTFTEVNSVRASTTKVTCCHFSSDGKMLASAGHDKKAV 676
Query: 307 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECK-YTIQD-DG 480
LW K E+HT + + FS ++ +SS DKT+++W+ A+ K Y+++ G
Sbjct: 677 LWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRVWD--ADNKGYSLRTFMG 734
Query: 481 HSDWVSCVRSHPI 519
HS V+ + HPI
Sbjct: 735 HSSMVTSLDFHPI 747
Score = 27.1 bits (57), Expect = 8.3
Identities = 11/36 (30%), Positives = 17/36 (47%)
Frame = +2
Query: 71 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 178
T GH+ VT + +P D+I S D + W +
Sbjct: 731 TFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSI 766
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 54.0 bits (124), Expect = 6e-08
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 435
S DG+ LS S+D+T R+ L +GK + F HT V F+ D +I+++S D T+K+
Sbjct: 314 SRDGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKV 373
Query: 436 WNT-LAECKYTIQ 471
W++ +C T +
Sbjct: 374 WDSKTTDCLQTFK 386
Score = 52.8 bits (121), Expect = 1e-07
Identities = 27/81 (33%), Positives = 47/81 (58%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 435
S D SGS D +++W + G RRF+ H++ V S++FS D Q++S+S D+T ++
Sbjct: 272 SRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARI 331
Query: 436 WNTLAECKYTIQDDGHSDWVS 498
+ L K + GH+ +V+
Sbjct: 332 -HGLKSGKLLKEFRGHTSYVN 351
Score = 40.7 bits (91), Expect = 6e-04
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTR--------RFEDHTKDVLSVAFSVDNRQIVSS 411
S DG + S S D + +WD +GK + F H VL + FS D+ + S
Sbjct: 222 SPDGQFLASSSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLASG 281
Query: 412 SRDKTIKLW 438
S+D IK+W
Sbjct: 282 SQDGKIKIW 290
Score = 33.1 bits (72), Expect = 0.13
Identities = 17/63 (26%), Positives = 28/63 (44%)
Frame = +1
Query: 250 CASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 429
C S+ G++ DK L ++ +G H KDV+ + + + S D T+
Sbjct: 447 CVSTKGDWIYCIGEDKKLYCFNYQSGGLEHFMMVHEKDVIGITHHPHRNLLATYSEDCTM 506
Query: 430 KLW 438
KLW
Sbjct: 507 KLW 509
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 53.6 bits (123), Expect = 8e-08
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 1/125 (0%)
Frame = +1
Query: 145 LSRQNSHRVEADQRRKQLRYTSKAFIRSFALHF*CCASS-DGNYALSGSWDKTLRLWDLA 321
L R +S E K + + IR A CC+ S DG S DK + +W++
Sbjct: 482 LKRNSSVHTETS---KPFSFNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNME 538
Query: 322 AGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECKYTIQDDGHSDWVSC 501
+ E+H + V F ++ Q+ +SS DKTIK+W+ + GH+ V
Sbjct: 539 TLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMS 598
Query: 502 VRSHP 516
+ HP
Sbjct: 599 IDFHP 603
Score = 33.5 bits (73), Expect = 0.096
Identities = 23/89 (25%), Positives = 37/89 (41%)
Frame = +1
Query: 250 CASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 429
C S +G S S D ++LW L++G + SV F ++ + I
Sbjct: 682 CWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAI 740
Query: 430 KLWNTLAECKYTIQDDGHSDWVSCVRSHP 516
+LWNT+ T+ GH +S + P
Sbjct: 741 ELWNTMENKCMTVA--GHECVISALAQSP 767
Score = 27.1 bits (57), Expect = 8.3
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +2
Query: 71 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 175
T+ GH ++ +A +P ++ S+S DK++ +WK
Sbjct: 752 TVAGHECVISALAQSPS-TGVVASASHDKSVKIWK 785
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 53.6 bits (123), Expect = 8e-08
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 1/125 (0%)
Frame = +1
Query: 145 LSRQNSHRVEADQRRKQLRYTSKAFIRSFALHF*CCASS-DGNYALSGSWDKTLRLWDLA 321
L R +S E K + + IR A CC+ S DG S DK + +W++
Sbjct: 484 LKRNSSVHTETS---KPFSFNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNME 540
Query: 322 AGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECKYTIQDDGHSDWVSC 501
+ E+H + V F ++ Q+ +SS DKTIK+W+ + GH+ V
Sbjct: 541 TLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMS 600
Query: 502 VRSHP 516
+ HP
Sbjct: 601 IDFHP 605
Score = 33.5 bits (73), Expect = 0.096
Identities = 23/89 (25%), Positives = 37/89 (41%)
Frame = +1
Query: 250 CASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 429
C S +G S S D ++LW L++G + SV F ++ + I
Sbjct: 684 CWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAI 742
Query: 430 KLWNTLAECKYTIQDDGHSDWVSCVRSHP 516
+LWNT+ T+ GH +S + P
Sbjct: 743 ELWNTMENKCMTVA--GHECVISALAQSP 769
Score = 27.1 bits (57), Expect = 8.3
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +2
Query: 71 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 175
T+ GH ++ +A +P ++ S+S DK++ +WK
Sbjct: 754 TVAGHECVISALAQSPS-TGVVASASHDKSVKIWK 787
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 53.6 bits (123), Expect = 8e-08
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 1/125 (0%)
Frame = +1
Query: 145 LSRQNSHRVEADQRRKQLRYTSKAFIRSFALHF*CCASS-DGNYALSGSWDKTLRLWDLA 321
L R +S E K + + IR A CC+ S DG S DK + +W++
Sbjct: 484 LKRNSSVHTETS---KPFSFNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNME 540
Query: 322 AGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECKYTIQDDGHSDWVSC 501
+ E+H + V F ++ Q+ +SS DKTIK+W+ + GH+ V
Sbjct: 541 TLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMS 600
Query: 502 VRSHP 516
+ HP
Sbjct: 601 IDFHP 605
Score = 33.5 bits (73), Expect = 0.096
Identities = 23/89 (25%), Positives = 37/89 (41%)
Frame = +1
Query: 250 CASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 429
C S +G S S D ++LW L++G + SV F ++ + I
Sbjct: 684 CWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAI 742
Query: 430 KLWNTLAECKYTIQDDGHSDWVSCVRSHP 516
+LWNT+ T+ GH +S + P
Sbjct: 743 ELWNTMENKCMTVA--GHECVISALAQSP 769
Score = 27.1 bits (57), Expect = 8.3
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +2
Query: 71 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 175
T+ GH ++ +A +P ++ S+S DK++ +WK
Sbjct: 754 TVAGHECVISALAQSPS-TGVVASASHDKSVKIWK 787
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 53.6 bits (123), Expect = 8e-08
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 1/125 (0%)
Frame = +1
Query: 145 LSRQNSHRVEADQRRKQLRYTSKAFIRSFALHF*CCASS-DGNYALSGSWDKTLRLWDLA 321
L R +S E K + + IR A CC+ S DG S DK + +W++
Sbjct: 484 LKRNSSVHTETS---KPFSFNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNME 540
Query: 322 AGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECKYTIQDDGHSDWVSC 501
+ E+H + V F ++ Q+ +SS DKTIK+W+ + GH+ V
Sbjct: 541 TLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMS 600
Query: 502 VRSHP 516
+ HP
Sbjct: 601 IDFHP 605
Score = 33.5 bits (73), Expect = 0.096
Identities = 23/89 (25%), Positives = 37/89 (41%)
Frame = +1
Query: 250 CASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 429
C S +G S S D ++LW L++G + SV F ++ + I
Sbjct: 684 CWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAI 742
Query: 430 KLWNTLAECKYTIQDDGHSDWVSCVRSHP 516
+LWNT+ T+ GH +S + P
Sbjct: 743 ELWNTMENKCMTVA--GHECVISALAQSP 769
Score = 27.1 bits (57), Expect = 8.3
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +2
Query: 71 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 175
T+ GH ++ +A +P ++ S+S DK++ +WK
Sbjct: 754 TVAGHECVISALAQSPS-TGVVASASHDKSVKIWK 787
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 53.6 bits (123), Expect = 8e-08
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 1/125 (0%)
Frame = +1
Query: 145 LSRQNSHRVEADQRRKQLRYTSKAFIRSFALHF*CCASS-DGNYALSGSWDKTLRLWDLA 321
L R +S E K + + IR A CC+ S DG S DK + +W++
Sbjct: 484 LKRNSSVHTETS---KPFSFNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNME 540
Query: 322 AGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECKYTIQDDGHSDWVSC 501
+ E+H + V F ++ Q+ +SS DKTIK+W+ + GH+ V
Sbjct: 541 TLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPVMS 600
Query: 502 VRSHP 516
+ HP
Sbjct: 601 IDFHP 605
Score = 33.5 bits (73), Expect = 0.096
Identities = 23/89 (25%), Positives = 37/89 (41%)
Frame = +1
Query: 250 CASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 429
C S +G S S D ++LW L++G + SV F ++ + I
Sbjct: 684 CWSPNGELVASVSED-AVKLWSLSSGDCIHELSNSGNKFHSVVFHPSYPDLLVIGGYQAI 742
Query: 430 KLWNTLAECKYTIQDDGHSDWVSCVRSHP 516
+LWNT+ T+ GH +S + P
Sbjct: 743 ELWNTMENKCMTVA--GHECVISALAQSP 769
Score = 27.1 bits (57), Expect = 8.3
Identities = 11/35 (31%), Positives = 22/35 (62%)
Frame = +2
Query: 71 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 175
T+ GH ++ +A +P ++ S+S DK++ +WK
Sbjct: 754 TVAGHECVISALAQSPS-TGVVASASHDKSVKIWK 787
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 53.2 bits (122), Expect = 1e-07
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = +1
Query: 178 DQRRKQLRYTSKAFIRSF-ALHF*CCASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 354
D R+K +T K R L F + DG + +SG D +++WDL AGK F+ H
Sbjct: 222 DIRKKGCIHTYKGHTRGVNVLRF----TPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSH 277
Query: 355 TKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
+ S+ F + + S DKT+K W+
Sbjct: 278 EGKIQSLDFHPHEFLLATGSADKTVKFWD 306
Score = 50.4 bits (115), Expect = 8e-07
Identities = 25/84 (29%), Positives = 40/84 (47%)
Frame = +1
Query: 265 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNT 444
G + SGS D L++WD+ ++ HT+ V + F+ D R IVS D +K+W+
Sbjct: 206 GEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWD- 264
Query: 445 LAECKYTIQDDGHSDWVSCVRSHP 516
L K + H + + HP
Sbjct: 265 LTAGKLLHEFKSHEGKIQSLDFHP 288
Score = 35.5 bits (78), Expect = 0.024
Identities = 21/80 (26%), Positives = 31/80 (38%)
Frame = +1
Query: 277 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAEC 456
++G D + LW + H+ + SV F + + + TIKLW+ L E
Sbjct: 126 VTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLVAAGAASGTIKLWD-LEEA 184
Query: 457 KYTIQDDGHSDWVSCVRSHP 516
K GH V HP
Sbjct: 185 KVVRTLTGHRSNCVSVNFHP 204
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/54 (24%), Positives = 29/54 (53%)
Frame = +1
Query: 280 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
+GS DKT++ WDL + T V + F+ D + ++ ++ ++K+++
Sbjct: 295 TGSADKTVKFWDLETFELIGSGGTETTGVRCLTFNPDGKSVLCGLQE-SLKIFS 347
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 52.4 bits (120), Expect = 2e-07
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Frame = +1
Query: 220 IRSFALHF*CCASSD----GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 387
+R+F H C++ + G + SGS D LR+WD + ++ HT+ + ++ FS
Sbjct: 42 VRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEFSP 101
Query: 388 DNRQIVSSSRDKTIKLWNTLA 450
D R +VS D +K+W+ A
Sbjct: 102 DGRWVVSGGLDNVVKVWDLTA 122
Score = 52.0 bits (119), Expect = 3e-07
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 2/116 (1%)
Frame = +1
Query: 100 SNCN*SEI-PGHDLIFLSRQNSHRVEADQRRKQLRYTSKAFIRSFA-LHF*CCASSDGNY 273
SNC+ E P + + +++ D R+K T K R + + F S DG +
Sbjct: 50 SNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTRGISTIEF----SPDGRW 105
Query: 274 ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
+SG D +++WDL AGK F+ H + S+ F + + S D+T+K W+
Sbjct: 106 VVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWD 161
Score = 34.3 bits (75), Expect = 0.055
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = +1
Query: 352 HTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRSHP 516
HT V SVAF+ + +++ + IKLW+ L E K GH S V HP
Sbjct: 6 HTSPVDSVAFNSEEVLVLAGASSGVIKLWD-LEESKMVRAFTGHRSNCSAVEFHP 59
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 52.0 bits (119), Expect = 3e-07
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = +1
Query: 178 DQRRKQLRYTSKAFIRSF-ALHF*CCASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 354
D R+K +T K R L F + DG + +SG D +++WDL AGK F+ H
Sbjct: 129 DIRKKGCIHTYKGHTRGVNVLRF----TPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSH 184
Query: 355 TKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
+ S+ F + + S D+T+K W+
Sbjct: 185 EGQIQSLDFHPHEFLLATGSADRTVKFWD 213
Score = 51.6 bits (118), Expect = 3e-07
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 4/103 (3%)
Frame = +1
Query: 220 IRSFALHF*CCASSD----GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 387
+R+ H C S D G + SGS D L++WD+ ++ HT+ V + F+
Sbjct: 94 VRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTP 153
Query: 388 DNRQIVSSSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRSHP 516
D R +VS D +K+W+ L K + H + + HP
Sbjct: 154 DGRWVVSGGEDNIVKVWD-LTAGKLLTEFKSHEGQIQSLDFHP 195
Score = 34.3 bits (75), Expect = 0.055
Identities = 21/80 (26%), Positives = 31/80 (38%)
Frame = +1
Query: 277 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAEC 456
++G D + LW + H+ + SV F + + + TIKLW+ L E
Sbjct: 33 VTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWD-LEEA 91
Query: 457 KYTIQDDGHSDWVSCVRSHP 516
K GH V HP
Sbjct: 92 KIVRTLTGHRSNCISVDFHP 111
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 52.0 bits (119), Expect = 3e-07
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = +1
Query: 178 DQRRKQLRYTSKAFIRSF-ALHF*CCASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDH 354
D R+K +T K R L F + DG + +SG D +++WDL AGK F+ H
Sbjct: 129 DIRKKGCIHTYKGHTRGVNVLRF----TPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSH 184
Query: 355 TKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
+ S+ F + + S D+T+K W+
Sbjct: 185 EGQIQSLDFHPHEFLLATGSADRTVKFWD 213
Score = 51.6 bits (118), Expect = 3e-07
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 4/103 (3%)
Frame = +1
Query: 220 IRSFALHF*CCASSD----GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 387
+R+ H C S D G + SGS D L++WD+ ++ HT+ V + F+
Sbjct: 94 VRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTP 153
Query: 388 DNRQIVSSSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRSHP 516
D R +VS D +K+W+ L K + H + + HP
Sbjct: 154 DGRWVVSGGEDNIVKVWD-LTAGKLLTEFKSHEGQIQSLDFHP 195
Score = 34.3 bits (75), Expect = 0.055
Identities = 21/80 (26%), Positives = 31/80 (38%)
Frame = +1
Query: 277 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAEC 456
++G D + LW + H+ + SV F + + + TIKLW+ L E
Sbjct: 33 VTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLVAAGAASGTIKLWD-LEEA 91
Query: 457 KYTIQDDGHSDWVSCVRSHP 516
K GH V HP
Sbjct: 92 KIVRTLTGHRSNCISVDFHP 111
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 51.6 bits (118), Expect = 3e-07
Identities = 20/65 (30%), Positives = 40/65 (61%)
Frame = +1
Query: 253 ASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 432
A+++G Y + G + LW++A GK +++ H + V + FS D+ +VS S+D +I+
Sbjct: 86 ANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIR 145
Query: 433 LWNTL 447
+W+ +
Sbjct: 146 VWSLI 150
Score = 36.3 bits (80), Expect = 0.014
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 13/75 (17%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAA---------GKTT--RRFEDHTKDVLSVAFSVD--NR 396
S D + +SGS D ++R+W L G T F +HT V + N
Sbjct: 129 SGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIVIDYGGCNA 188
Query: 397 QIVSSSRDKTIKLWN 441
I+SSS D+T K+W+
Sbjct: 189 VIISSSEDRTCKVWS 203
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 51.2 bits (117), Expect = 4e-07
Identities = 23/54 (42%), Positives = 32/54 (59%)
Frame = +1
Query: 280 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
S S+D T++LWD GK F H + V S+AFS + I S S DK+I +W+
Sbjct: 516 SASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWS 569
Score = 45.6 bits (103), Expect = 2e-05
Identities = 28/84 (33%), Positives = 44/84 (52%)
Frame = +1
Query: 265 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNT 444
G+Y L+GS D+T +WD+ A + ++FE H+ L V + +N +SS D I L
Sbjct: 377 GDYLLTGSVDRTAVVWDVKAEEWKQQFEFHSGPTLDVDWR-NNVSFATSSTDSMIYLCK- 434
Query: 445 LAECKYTIQDDGHSDWVSCVRSHP 516
+ E + GH V+CV+ P
Sbjct: 435 IGETRPAKTFTGHQGEVNCVKWDP 458
Score = 34.3 bits (75), Expect = 0.055
Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Frame = +1
Query: 265 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV-------DNRQ--IVSSSR 417
G+ S S D T ++W++ +HTK++ ++ +S N+Q + S+S
Sbjct: 460 GSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASF 519
Query: 418 DKTIKLWN 441
D T+KLW+
Sbjct: 520 DSTVKLWD 527
Score = 33.9 bits (74), Expect = 0.073
Identities = 14/58 (24%), Positives = 30/58 (51%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 429
S +G Y SGS DK++ +W + GK + + + + V ++ + +I + D ++
Sbjct: 550 SPNGEYIASGSLDKSIHIWSIKEGKIVKTYTGN-GGIFEVCWNKEGNKIAACFADNSV 606
Score = 32.3 bits (70), Expect = 0.22
Identities = 19/77 (24%), Positives = 37/77 (48%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 435
+ +G +GS D R+W L G+ H + S+ ++ +++ S D+T +
Sbjct: 333 NGEGTLLATGSCDGQARIWTLN-GELISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVV 391
Query: 436 WNTLAECKYTIQDDGHS 486
W+ AE ++ Q + HS
Sbjct: 392 WDVKAE-EWKQQFEFHS 407
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 59 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 190
+L TL H G + + N K D +L+ S D+T +VW + +E
Sbjct: 356 ELISTLSKHKGPIFSLKWNKK-GDYLLTGSVDRTAVVWDVKAEE 398
Score = 27.9 bits (59), Expect = 4.8
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +1
Query: 337 RRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
R E HT +V + A+S + S S D T ++W+
Sbjct: 259 RILEGHTSEVCACAWSPSASLLASGSGDATARIWS 293
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 51.2 bits (117), Expect = 4e-07
Identities = 22/76 (28%), Positives = 40/76 (52%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 435
SSDG Y +G D+ + +WD+ + + F H V + F ++ S S D+T+K+
Sbjct: 231 SSDGRYLATGGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKV 290
Query: 436 WNTLAECKYTIQDDGH 483
WN + + + ++ GH
Sbjct: 291 WN-VEDKAFITENHGH 305
Score = 36.3 bits (80), Expect = 0.014
Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 19/102 (18%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTR-------------------RFEDHTKDVLSVA 378
S D + S S D T+ WD+++GKT + R ++H+++ L++A
Sbjct: 170 SDDDSRGFSASKDGTIMHWDVSSGKTDKYIWPSDEILKSHGMKLREPRNKNHSRESLALA 229
Query: 379 FSVDNRQIVSSSRDKTIKLWNTLAECKYTIQDDGHSDWVSCV 504
S D R + + D+ + +W+ ++ GH + VSC+
Sbjct: 230 VSSDGRYLATGGVDRHVHIWDVRTR-EHVQAFPGHRNTVSCL 270
Score = 29.1 bits (62), Expect = 2.1
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 247 CCASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDV 366
CC SD Y LSGS + T+ LW + K F++ +D+
Sbjct: 352 CCFISDNEY-LSGSDNGTVALWGMLKKKPVFVFKNAHQDI 390
Score = 28.7 bits (61), Expect = 2.7
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 352 HTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
H + V+SVA S D+ + S+S+D TI W+
Sbjct: 160 HRRSVVSVALSDDDSRGFSASKDGTIMHWD 189
Score = 27.5 bits (58), Expect = 6.3
Identities = 17/74 (22%), Positives = 38/74 (51%)
Frame = +1
Query: 280 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECK 459
SGS+D+T+++W++ H ++L++ ++ + ++ RD+T+ L++ + E
Sbjct: 281 SGSFDRTVKVWNVEDKAFITENHGHQGEILAID-ALRKERALTVGRDRTM-LYHKVPEST 338
Query: 460 YTIQDDGHSDWVSC 501
I S SC
Sbjct: 339 RMIYRAPASSLESC 352
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 50.4 bits (115), Expect = 8e-07
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 5/90 (5%)
Frame = +1
Query: 250 CASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 429
C S DG SG D LRLWD+ GK H+ V SV+ S + +I++S RD
Sbjct: 364 CLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVH 423
Query: 430 KLWNT-LAECKYTIQDDGH---SDWV-SCV 504
+++T E T++ G+ S+W SC+
Sbjct: 424 NVFDTRTLEICGTLRASGNRLASNWSRSCI 453
Score = 41.9 bits (94), Expect = 3e-04
Identities = 19/61 (31%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSSSRDKTIKLW 438
D ++ + L +WD+++G+ HT V +V S +R +VS++ D+TIKLW
Sbjct: 284 DNKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLW 343
Query: 439 N 441
+
Sbjct: 344 D 344
Score = 40.7 bits (91), Expect = 6e-04
Identities = 22/78 (28%), Positives = 40/78 (51%)
Frame = +1
Query: 271 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 450
+ +S ++D+T++LWDL G T T + ++ S+D + S D ++LW+ +
Sbjct: 330 HVVSAAYDRTIKLWDLHKGYCTNTVL-FTSNCNAICLSIDGLTVFSGHMDGNLRLWD-IQ 387
Query: 451 ECKYTIQDDGHSDWVSCV 504
K + GHS V+ V
Sbjct: 388 TGKLLSEVAGHSSAVTSV 405
Score = 40.7 bits (91), Expect = 6e-04
Identities = 25/105 (23%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
Frame = +1
Query: 127 GHDLIFLSRQNSHRVEADQRRKQLRYTSKAFIRSFALHF*-CCASSDGNYALSGSWDKTL 303
G+ ++ R N H V D R ++ T +A A ++ C S D +Y +GS D ++
Sbjct: 411 GNRILTSGRDNVHNV-FDTRTLEICGTLRASGNRLASNWSRSCISPDDDYVAAGSADGSV 469
Query: 304 RLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 438
+W L+ G ++ T +L ++S + + S+ ++ + W
Sbjct: 470 HVWSLSKGNIVSILKEQTSPILCCSWSGIGKPLASADKNGYVCTW 514
Score = 37.5 bits (83), Expect = 0.006
Identities = 16/76 (21%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Frame = +1
Query: 280 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN-TLAEC 456
+G D+ +++WD +G + ++L +A + DN+ +++++ + +W+ +
Sbjct: 248 TGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSGRV 307
Query: 457 KYTIQDDGHSDWVSCV 504
++T+ GH+D V V
Sbjct: 308 RHTL--TGHTDKVCAV 321
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 50.4 bits (115), Expect = 8e-07
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Frame = +1
Query: 247 CC--ASSDGNYALSGSWDKTLRLWDLAAGKTTRRF-----EDHTKDVLSVAFSVDNRQ-I 402
CC ++ + ++ S D+T LWD+ G T F HT DVLSV+ S N
Sbjct: 161 CCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWF 220
Query: 403 VSSSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRSHP 516
+S S D T +LW+T A + GH V+ V+ P
Sbjct: 221 ISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFP 258
Score = 47.2 bits (107), Expect = 7e-06
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 253 ASSDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 429
+ S+ N+ +SGS D T RLWD AA + R F H DV +V F D + + S D T
Sbjct: 213 SGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTC 272
Query: 430 KLWN 441
+L++
Sbjct: 273 RLYD 276
Score = 31.5 bits (68), Expect = 0.39
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 337 RRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECK 459
R + HT V S+ ++ + +IVS+S+D + +WN L K
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQK 99
Score = 30.3 bits (65), Expect = 0.89
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 53 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 181
T+ + L GH G+V+ P +++SS D+T I+W +T
Sbjct: 145 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVT 187
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 50.4 bits (115), Expect = 8e-07
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Frame = +1
Query: 247 CC--ASSDGNYALSGSWDKTLRLWDLAAGKTTRRF-----EDHTKDVLSVAFSVDNRQ-I 402
CC ++ + ++ S D+T LWD+ G T F HT DVLSV+ S N
Sbjct: 99 CCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWF 158
Query: 403 VSSSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRSHP 516
+S S D T +LW+T A + GH V+ V+ P
Sbjct: 159 ISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFP 196
Score = 47.2 bits (107), Expect = 7e-06
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 253 ASSDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 429
+ S+ N+ +SGS D T RLWD AA + R F H DV +V F D + + S D T
Sbjct: 151 SGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTC 210
Query: 430 KLWN 441
+L++
Sbjct: 211 RLYD 214
Score = 30.3 bits (65), Expect = 0.89
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 53 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 181
T+ + L GH G+V+ P +++SS D+T I+W +T
Sbjct: 83 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVT 125
Score = 28.7 bits (61), Expect = 2.7
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLW 312
S+DG+ +GSWD L++W
Sbjct: 288 SADGSALCTGSWDSNLKIW 306
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 50.4 bits (115), Expect = 8e-07
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Frame = +1
Query: 247 CC--ASSDGNYALSGSWDKTLRLWDLAAGKTTRRF-----EDHTKDVLSVAFSVDNRQ-I 402
CC ++ + ++ S D+T LWD+ G T F HT DVLSV+ S N
Sbjct: 161 CCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADVLSVSISGSNPNWF 220
Query: 403 VSSSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRSHP 516
+S S D T +LW+T A + GH V+ V+ P
Sbjct: 221 ISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFP 258
Score = 47.2 bits (107), Expect = 7e-06
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 253 ASSDGNYALSGSWDKTLRLWDL-AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 429
+ S+ N+ +SGS D T RLWD AA + R F H DV +V F D + + S D T
Sbjct: 213 SGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTC 272
Query: 430 KLWN 441
+L++
Sbjct: 273 RLYD 276
Score = 31.5 bits (68), Expect = 0.39
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 337 RRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECK 459
R + HT V S+ ++ + +IVS+S+D + +WN L K
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQK 99
Score = 30.3 bits (65), Expect = 0.89
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +2
Query: 53 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 181
T+ + L GH G+V+ P +++SS D+T I+W +T
Sbjct: 145 TVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVT 187
Score = 28.7 bits (61), Expect = 2.7
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLW 312
S+DG+ +GSWD L++W
Sbjct: 350 SADGSALCTGSWDSNLKIW 368
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 50.0 bits (114), Expect = 1e-06
Identities = 25/85 (29%), Positives = 40/85 (47%)
Frame = +1
Query: 247 CCASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 426
C S Y + S DKT+++W++ K + H + V FSVD +V++S D T
Sbjct: 217 CLLSPANKYLATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMT 276
Query: 427 IKLWNTLAECKYTIQDDGHSDWVSC 501
+LW+ A + + H V C
Sbjct: 277 ARLWSMPAGKEVKVYQGHHKATVCC 301
Score = 39.5 bits (88), Expect = 0.001
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTT-------RRFEDHTKDVLSVAFSVDNRQIVSSSRD 420
DG ++ + T +W L GK T + + H +L S N+ + ++S D
Sbjct: 173 DGTMVVAANNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYLATASSD 232
Query: 421 KTIKLWNTLAECKYTIQDDGHSDWV-SCVRS 510
KT+K+WN + K GH WV CV S
Sbjct: 233 KTVKIWN-VDGFKLEKVLTGHQRWVWDCVFS 262
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/65 (29%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAG--KTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 435
D +Y L+ + + +RL+D+ + + ++ HT +V++V F D + + S S D T+K+
Sbjct: 46 DKHY-LAAACNPHIRLFDVNSNSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKI 104
Query: 436 WNTLA 450
W+ A
Sbjct: 105 WDLRA 109
Score = 37.9 bits (84), Expect = 0.004
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +1
Query: 247 CCASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 378
C S DG + ++ S D T RLW + AGK + ++ H K + A
Sbjct: 259 CVFSVDGEFLVTASSDMTARLWSMPAGKEVKVYQGHHKATVCCA 302
Score = 35.9 bits (79), Expect = 0.018
Identities = 17/63 (26%), Positives = 33/63 (52%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
D + SGS D T+++WDL A + +E V +V + +++S ++ I++W+
Sbjct: 89 DAKWMYSGSEDGTVKIWDLRAPGCQKEYES-VAAVNTVVLHPNQTELISGDQNGNIRVWD 147
Query: 442 TLA 450
A
Sbjct: 148 LRA 150
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 50.0 bits (114), Expect = 1e-06
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Frame = +1
Query: 220 IRSFALHF*CCASSD----GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 387
+R+F H C++ + G + SGS D L++WD+ + ++ H++ + ++ F+
Sbjct: 93 VRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTP 152
Query: 388 DNRQIVSSSRDKTIKLWNTLA 450
D R +VS D +K+W+ A
Sbjct: 153 DGRWVVSGGLDNVVKVWDLTA 173
Score = 49.6 bits (113), Expect = 1e-06
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 2/116 (1%)
Frame = +1
Query: 100 SNCN*SEI-PGHDLIFLSRQNSHRVEADQRRKQLRYTSKAFIRSFA-LHF*CCASSDGNY 273
SNC+ E P + + +++ D R+K T K R + + F + DG +
Sbjct: 101 SNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSRGISTIRF----TPDGRW 156
Query: 274 ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
+SG D +++WDL AGK F+ H + S+ F + + S D+T+K W+
Sbjct: 157 VVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLEFLLATGSADRTVKFWD 212
Score = 36.3 bits (80), Expect = 0.014
Identities = 23/80 (28%), Positives = 34/80 (42%)
Frame = +1
Query: 277 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAEC 456
++G D + LW + + HT V SVAF +++ + IKLW+ + E
Sbjct: 32 ITGGDDYKVNLWAIGKPTSLMSLCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWD-VEEA 90
Query: 457 KYTIQDDGHSDWVSCVRSHP 516
K GH S V HP
Sbjct: 91 KMVRAFTGHRSNCSAVEFHP 110
Score = 27.1 bits (57), Expect = 8.3
Identities = 14/54 (25%), Positives = 26/54 (48%)
Frame = +1
Query: 280 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
+GS D+T++ WDL + V S+ F D R + D ++K+++
Sbjct: 201 TGSADRTVKFWDLETFELIGSTRPEATGVRSIKFHPDGRTLF-CGLDDSLKVYS 253
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 50.0 bits (114), Expect = 1e-06
Identities = 20/57 (35%), Positives = 36/57 (63%)
Frame = +1
Query: 268 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 438
N L+G DK + WD+ G+ T+ ++ H V ++ F +NR+ V+SS DK++++W
Sbjct: 383 NILLAGMSDKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVW 439
Score = 46.0 bits (104), Expect = 2e-05
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +1
Query: 265 GNYALSGSWDKTLRLWDLA-AGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
G+ LS D +++WD+ +GK R + H K V + FS D + +++ DK IK W+
Sbjct: 295 GHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWD 354
Query: 442 T 444
T
Sbjct: 355 T 355
Score = 33.1 bits (72), Expect = 0.13
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +1
Query: 250 CASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ--IVSSSRDK 423
C S+DG+ L+ +DK ++ WD G+ F + D++Q +++ DK
Sbjct: 333 CFSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDK 392
Query: 424 TIKLWN 441
I W+
Sbjct: 393 KIVQWD 398
Score = 28.3 bits (60), Expect = 3.6
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = +2
Query: 59 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 238
+L T GH V+ I PK ++LS+ D + +W D N G + GH+
Sbjct: 273 RLVHTWSGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIW----DVYNSGKCMRTYMGHAKA 328
Query: 239 ISDV 250
+ D+
Sbjct: 329 VRDI 332
Score = 27.9 bits (59), Expect = 4.8
Identities = 24/108 (22%), Positives = 42/108 (38%), Gaps = 3/108 (2%)
Frame = +1
Query: 127 GHDLIFLSRQNSHRVEADQRRKQLRYTSKAFIRSFALHF*CCA--SSDGNYALSGSWDKT 300
G+ L S N + + + R QL K F + C S DG + +SG +
Sbjct: 467 GNWLAAQSLDNQILIYSTRERFQLN-KKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGK 525
Query: 301 LRLWDLAAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSSSRDKTIKLWN 441
WD + K R + H + + ++ ++ + D IK W+
Sbjct: 526 CWFWDWKSCKVFRTLKCHNGVCIGAEWHPLEQSKVATCGWDGLIKYWD 573
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 49.6 bits (113), Expect = 1e-06
Identities = 22/59 (37%), Positives = 41/59 (69%)
Frame = +1
Query: 343 FEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRSHPI 519
F+ H DVL +A+S ++ ++SSS DKT++LWN ++ ++ HSD+V+C++ +P+
Sbjct: 509 FQGHVDDVLDLAWS-KSQHLLSSSMDKTVRLWNLSSQT--CLKVFSHSDYVTCIQFNPV 564
Score = 44.8 bits (101), Expect = 4e-05
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Frame = +1
Query: 253 ASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSSSRDKTI 429
A S + LS S DKT+RLW+L++ +T + H+ V + F+ VD+R +S S D +
Sbjct: 520 AWSKSQHLLSSSMDKTVRLWNLSS-QTCLKVFSHSDYVTCIQFNPVDDRYFISGSLDAKV 578
Query: 430 KLWN 441
++W+
Sbjct: 579 RVWS 582
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/60 (21%), Positives = 31/60 (51%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
D Y +SGS D +R+W + + ++ H + V S ++ D + ++ S + ++++
Sbjct: 565 DDRYFISGSLDAKVRVWSIPDRQVVDWYDLH-EMVTSACYTPDGQGVLVGSYKGSCRMYS 623
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 49.2 bits (112), Expect = 2e-06
Identities = 25/81 (30%), Positives = 41/81 (50%)
Frame = +1
Query: 280 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECK 459
+GS D+T+++WD+A G H + V +A S + + S+ DK +K W+ L + K
Sbjct: 193 TGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAVSNRHTYMFSAGDDKQVKCWD-LEQNK 251
Query: 460 YTIQDDGHSDWVSCVRSHPIM 522
GH V C+ HP +
Sbjct: 252 VIRSYHGHLSGVYCLALHPTL 272
Score = 38.3 bits (85), Expect = 0.003
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +1
Query: 277 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 432
++GS D T++ WDL GKT H K V ++ S+S D T K
Sbjct: 318 VTGSHDTTIKFWDLRYGKTMSTLTHHKKSVRAMTLHPKENAFASASADNTKK 369
Score = 37.5 bits (83), Expect = 0.006
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +1
Query: 277 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
L+G D R+WD+ H V SV + Q+V+ S D TIK W+
Sbjct: 276 LTGGRDSVCRVWDIRTKMQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWD 330
Score = 31.9 bits (69), Expect = 0.29
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 319 AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
A K R + H V SVAF N + S D+TIK+W+
Sbjct: 164 APWKNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWD 204
Score = 29.9 bits (64), Expect = 1.2
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +2
Query: 74 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 172
++GH GWV +A +P + + S D+T+ +W
Sbjct: 172 IQGHLGWVRSVAFDPS-NEWFCTGSADRTIKIW 203
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 49.2 bits (112), Expect = 2e-06
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
DG A S D R+WDL G++ F+ H K V SV FS + + S D ++W+
Sbjct: 392 DGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWD 451
Query: 442 -TLAECKYTIQDDGHSDWVSCVRSHP 516
+ + Y I H++ VS V+ P
Sbjct: 452 LRMRKSLYII--PAHANLVSQVKYEP 475
Score = 44.4 bits (100), Expect = 5e-05
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +1
Query: 265 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
G Y + S+DKT RLWD+ G E H++ V +AF D S D ++W+
Sbjct: 351 GKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWD 409
Score = 43.6 bits (98), Expect = 9e-05
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 1/91 (1%)
Frame = +1
Query: 247 CCASSDGNYALSGSWDKTLRLWDLA-AGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDK 423
C S DG + S +LW++ T +DH + V FS + + ++S D+
Sbjct: 261 CSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADR 320
Query: 424 TIKLWNTLAECKYTIQDDGHSDWVSCVRSHP 516
T KLW T T +GH D ++ V HP
Sbjct: 321 TAKLWKTDGTLLQTF--EGHLDRLARVAFHP 349
Score = 39.5 bits (88), Expect = 0.001
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = +1
Query: 280 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECK 459
+ S D+T +LW G + FE H + VAF + + ++S DKT +LW+ +
Sbjct: 315 TASADRTAKLWK-TDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAE 373
Query: 460 YTIQDDGHS 486
+Q +GHS
Sbjct: 374 LLLQ-EGHS 381
Score = 36.7 bits (81), Expect = 0.010
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
+G + + S+D + +W + H V S+ + D+ I + S D+TIKLW
Sbjct: 477 EGYFLATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWT 536
Query: 442 T 444
+
Sbjct: 537 S 537
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 49.2 bits (112), Expect = 2e-06
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Frame = +1
Query: 280 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAE-- 453
+G D T L+D +G+ H+K V SV F D+ ++++S DKT+++W +
Sbjct: 239 TGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGN 298
Query: 454 --CKYTIQDDGHSDWVSCVRSHP 516
C YT+ D HS V V HP
Sbjct: 299 YACGYTLND--HSAEVRAVTVHP 319
Score = 37.9 bits (84), Expect = 0.004
Identities = 14/60 (23%), Positives = 36/60 (60%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
DG +G+ +++WD+ + +F+ HT +V +++FS +N ++++ + ++LW+
Sbjct: 364 DGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFS-ENGYFLATAAEDGVRLWD 422
Score = 35.5 bits (78), Expect = 0.024
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLW------DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDK 423
D + L+ S DKT+R+W + A G T DH+ +V +V N+ VS+S D
Sbjct: 275 DSDLVLTASADKTVRIWRNPGDGNYACGYT---LNDHSAEVRAVTVHPTNKYFVSASLDG 331
Query: 424 TIKLWN-TLAECKYTIQDDGHSDWVSCVRSHP 516
T ++ + C + DD + + HP
Sbjct: 332 TWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHP 363
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 59 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN 193
++ TL GH+ VT + D++L++S DKT+ +W+ D N
Sbjct: 255 QILSTLTGHSKKVTSVKFVGD-SDLVLTASADKTVRIWRNPGDGN 298
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 49.2 bits (112), Expect = 2e-06
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Frame = +1
Query: 280 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAE-- 453
+G D T L+D +G+ H+K V SV F D+ ++++S DKT+++W +
Sbjct: 239 TGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGN 298
Query: 454 --CKYTIQDDGHSDWVSCVRSHP 516
C YT+ D HS V V HP
Sbjct: 299 YACGYTLND--HSAEVRAVTVHP 319
Score = 37.9 bits (84), Expect = 0.004
Identities = 14/60 (23%), Positives = 36/60 (60%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
DG +G+ +++WD+ + +F+ HT +V +++FS +N ++++ + ++LW+
Sbjct: 364 DGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFS-ENGYFLATAAEDGVRLWD 422
Score = 35.5 bits (78), Expect = 0.024
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLW------DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDK 423
D + L+ S DKT+R+W + A G T DH+ +V +V N+ VS+S D
Sbjct: 275 DSDLVLTASADKTVRIWRNPGDGNYACGYT---LNDHSAEVRAVTVHPTNKYFVSASLDG 331
Query: 424 TIKLWN-TLAECKYTIQDDGHSDWVSCVRSHP 516
T ++ + C + DD + + HP
Sbjct: 332 TWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHP 363
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +2
Query: 59 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN 193
++ TL GH+ VT + D++L++S DKT+ +W+ D N
Sbjct: 255 QILSTLTGHSKKVTSVKFVGD-SDLVLTASADKTVRIWRNPGDGN 298
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 48.8 bits (111), Expect = 2e-06
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Frame = +1
Query: 277 LSGSWDKTLRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
+SG DK +R+WD GK ++ ++ H KD+ S+ + D+ ++ S DKT KLW+
Sbjct: 164 VSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 35.5 bits (78), Expect = 0.024
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 247 CC-ASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 405
CC S D + ++GS D+T +LWD+ +GK F+ SV F+V +R V
Sbjct: 57 CCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFK-FNAPTRSVDFAVGDRLAV 109
Score = 33.5 bits (73), Expect = 0.096
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
+G+ S + D T LW G+ + H V S D+ ++++ S D+T KLW+
Sbjct: 21 EGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWD 80
Score = 31.9 bits (69), Expect = 0.29
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +1
Query: 250 CASSDGNYALSGSWDKTLRLWDL 318
C ++D ++ L+GS DKT +LWD+
Sbjct: 200 CKAADDSHFLTGSLDKTAKLWDM 222
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 48.8 bits (111), Expect = 2e-06
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Frame = +1
Query: 277 LSGSWDKTLRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
+SG DK +R+WD GK ++ ++ H KD+ S+ + D+ ++ S DKT KLW+
Sbjct: 164 VSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 35.5 bits (78), Expect = 0.024
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 247 CC-ASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 405
CC S D + ++GS D+T +LWD+ +GK F+ SV F+V +R V
Sbjct: 57 CCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFK-FNAPTRSVDFAVGDRLAV 109
Score = 33.5 bits (73), Expect = 0.096
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
+G+ S + D T LW G+ + H V S D+ ++++ S D+T KLW+
Sbjct: 21 EGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWD 80
Score = 31.9 bits (69), Expect = 0.29
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +1
Query: 250 CASSDGNYALSGSWDKTLRLWDL 318
C ++D ++ L+GS DKT +LWD+
Sbjct: 200 CKAADDSHFLTGSLDKTAKLWDM 222
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 48.8 bits (111), Expect = 2e-06
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 3/58 (5%)
Frame = +1
Query: 277 LSGSWDKTLRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
+SG DK +R+WD GK ++ ++ H KD+ S+ + D+ ++ S DKT KLW+
Sbjct: 164 VSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSHFLTGSLDKTAKLWD 221
Score = 35.5 bits (78), Expect = 0.024
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +1
Query: 247 CC-ASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 405
CC S D + ++GS D+T +LWD+ +GK F+ SV F+V +R V
Sbjct: 57 CCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFK-FNAPTRSVDFAVGDRLAV 109
Score = 33.5 bits (73), Expect = 0.096
Identities = 17/60 (28%), Positives = 29/60 (48%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
+G+ S + D T LW G+ + H V S D+ ++++ S D+T KLW+
Sbjct: 21 EGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSSRLITGSADQTAKLWD 80
Score = 31.9 bits (69), Expect = 0.29
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +1
Query: 250 CASSDGNYALSGSWDKTLRLWDL 318
C ++D ++ L+GS DKT +LWD+
Sbjct: 200 CKAADDSHFLTGSLDKTAKLWDM 222
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 48.4 bits (110), Expect = 3e-06
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLW--DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 429
S+D +Y +GS D TL+ W D A + FE H V A + ++ +VS S D T+
Sbjct: 49 SNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALAGEST-LVSCSSDTTV 107
Query: 430 KLWNTLAE--CKYTIQDDGHSDWVSCV 504
K W+ L++ C T++ HSD+V+C+
Sbjct: 108 KTWDGLSDGVCTRTLRQ--HSDYVTCL 132
Score = 43.2 bits (97), Expect = 1e-04
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +1
Query: 265 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNT 444
G +SG +K LR+WD G + + HT +V + R +S S D I+LW+
Sbjct: 225 GTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDL 284
Query: 445 -LAECKYTIQDDGHSDW 492
C +T S W
Sbjct: 285 GQQRCLHTYAVHTDSVW 301
Score = 41.5 bits (93), Expect = 4e-04
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +1
Query: 259 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 435
S G + LSGS D +RLWDL + + HT V ++A + + S RD+ + L
Sbjct: 265 STGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYL 323
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 361 DVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECKY-TIQDDGHSDWVS 498
DVL + S D + + SRD T+K W + + + + H DWV+
Sbjct: 42 DVLKSSVSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVN 88
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 48.4 bits (110), Expect = 3e-06
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLW--DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 429
S+D +Y +GS D TL+ W D A + FE H V A + ++ +VS S D T+
Sbjct: 49 SNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVNDAALAGEST-LVSCSSDTTV 107
Query: 430 KLWNTLAE--CKYTIQDDGHSDWVSCV 504
K W+ L++ C T++ HSD+V+C+
Sbjct: 108 KTWDGLSDGVCTRTLRQ--HSDYVTCL 132
Score = 43.2 bits (97), Expect = 1e-04
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Frame = +1
Query: 265 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNT 444
G +SG +K LR+WD G + + HT +V + R +S S D I+LW+
Sbjct: 225 GTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDL 284
Query: 445 -LAECKYTIQDDGHSDW 492
C +T S W
Sbjct: 285 GQQRCLHTYAVHTDSVW 301
Score = 41.5 bits (93), Expect = 4e-04
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +1
Query: 259 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 435
S G + LSGS D +RLWDL + + HT V ++A + + S RD+ + L
Sbjct: 265 STGRFCLSGSSDSMIRLWDLGQQRCLHTYAVHTDSVWALACNPSFSHVYSGGRDQCLYL 323
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 361 DVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECKY-TIQDDGHSDWVS 498
DVL + S D + + SRD T+K W + + + + H DWV+
Sbjct: 42 DVLKSSVSNDQSYLFTGSRDGTLKRWAFDEDATFCSATFESHVDWVN 88
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 48.0 bits (109), Expect = 4e-06
Identities = 24/84 (28%), Positives = 45/84 (53%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 435
+ DGNYAL+ D+T+RLW+ G + ++ H ++V V + DN + S D+ +
Sbjct: 27 NGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHVTSDNAKFCSCGGDRQVYY 86
Query: 436 WNTLAECKYTIQDDGHSDWVSCVR 507
W+ ++ + + GH V+ V+
Sbjct: 87 WD-VSTGRVIRKFRGHDGEVNAVK 109
Score = 44.0 bits (99), Expect = 7e-05
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +1
Query: 247 CCASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 426
CC ++ + + GS D + WDL K +F H V SV++ +++SS D T
Sbjct: 234 CCLTNSDAHVIGGSEDGLVFFWDLVDAKVLSKFRAHDLVVTSVSYHPKEDCMLTSSVDGT 293
Query: 427 IKLW 438
I++W
Sbjct: 294 IRVW 297
Score = 42.3 bits (95), Expect = 2e-04
Identities = 17/62 (27%), Positives = 36/62 (58%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 435
+SD S D+ + WD++ G+ R+F H +V +V F+ + +VS+ D+++++
Sbjct: 69 TSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSLRV 128
Query: 436 WN 441
W+
Sbjct: 129 WD 130
Score = 40.3 bits (90), Expect = 8e-04
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN--RQIVSSSRDKTI 429
S+DGN L+G D TLRL D G+ + ++ H + N ++ S D +
Sbjct: 193 SNDGNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGGSEDGLV 252
Query: 430 KLWNTLAECKYTIQDDGHSDWVSCVRSHP 516
W+ L + K + H V+ V HP
Sbjct: 253 FFWD-LVDAKVLSKFRAHDLVVTSVSYHP 280
Score = 30.7 bits (66), Expect = 0.68
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +2
Query: 59 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 175
K+ R H+ VT ++ +PK D +L+SS D T+ VWK
Sbjct: 261 KVLSKFRAHDLVVTSVSYHPK-EDCMLTSSVDGTIRVWK 298
Score = 29.5 bits (63), Expect = 1.6
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 328 KTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
K + H VL+ F+ D ++ +D+TI+LWN
Sbjct: 9 KEAHILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWN 46
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 48.0 bits (109), Expect = 4e-06
Identities = 26/85 (30%), Positives = 41/85 (48%)
Frame = +1
Query: 280 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECK 459
+GS D+T+++WD+A G H V +A S + + S+ DK +K W+ L + K
Sbjct: 187 TGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWD-LEQNK 245
Query: 460 YTIQDDGHSDWVSCVRSHPIMPTPL 534
GH V C+ HP + L
Sbjct: 246 VIRSYHGHLHGVYCLALHPTLDVVL 270
Score = 39.1 bits (87), Expect = 0.002
Identities = 25/80 (31%), Positives = 34/80 (42%)
Frame = +1
Query: 277 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAEC 456
L+G D R+WD+ K H DV SV + Q+++ S D TIK W+ L
Sbjct: 270 LTGGRDSVCRVWDIRT-KMQIFVLPHDSDVFSVLARPTDPQVITGSHDSTIKFWD-LRYG 327
Query: 457 KYTIQDDGHSDWVSCVRSHP 516
K H V + HP
Sbjct: 328 KSMATITNHKKTVRAMALHP 347
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +1
Query: 277 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 432
++GS D T++ WDL GK+ +H K V ++A VS+S D K
Sbjct: 311 ITGSHDSTIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFVSASADNIKK 362
Score = 31.9 bits (69), Expect = 0.29
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 319 AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
A K R + H V SVAF N + S D+TIK+W+
Sbjct: 158 APWKNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWD 198
Score = 30.7 bits (66), Expect = 0.68
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 74 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 172
L+GH GWV +A +P + + S D+T+ +W
Sbjct: 166 LQGHLGWVRSVAFDPS-NEWFCTGSADRTIKIW 197
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 48.0 bits (109), Expect = 4e-06
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = +1
Query: 238 HF*CCASSDGN-YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSS 414
H C S GN Y + S DKT+++W+L K + H + V FS+D +V++S
Sbjct: 219 HILKCLLSPGNKYLATASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDFSMDGEYLVTAS 278
Query: 415 RDKTIKLWNTLA 450
D T +LW+ A
Sbjct: 279 SDTTARLWSMRA 290
Score = 37.9 bits (84), Expect = 0.004
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Frame = +1
Query: 301 LRLWDLAAGKT---TRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN-TLAECK 459
+RL+DL + R F HTK+V++V F + S S D ++K+W+ + EC+
Sbjct: 63 IRLFDLRSYNPHIPVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQ 119
Score = 37.1 bits (82), Expect = 0.008
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +1
Query: 247 CCASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTK 360
C S DG Y ++ S D T RLW + AGK ++ H K
Sbjct: 265 CDFSMDGEYLVTASSDTTARLWSMRAGKEEMVYQAHRK 302
Score = 36.3 bits (80), Expect = 0.014
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 7/85 (8%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLW-DLAAGKTTRRFED------HTKDVLSVAFSVDNRQIVSSSRD 420
DG ++ + T +W L +T FE H +L S N+ + ++S D
Sbjct: 179 DGTMVVAANDRGTCYVWRSLCERQTMTEFEPLHKLQAHNSHILKCLLSPGNKYLATASSD 238
Query: 421 KTIKLWNTLAECKYTIQDDGHSDWV 495
KT+K+WN L K GH WV
Sbjct: 239 KTVKIWN-LDGFKLEKVLTGHERWV 262
Score = 35.1 bits (77), Expect = 0.031
Identities = 16/63 (25%), Positives = 33/63 (52%)
Frame = +1
Query: 265 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNT 444
G+ SGS D ++++WDL + R F V +V + +++S ++ I++W+
Sbjct: 96 GHMMYSGSEDGSVKIWDLRVRECQREFRS-VSPVNTVVLHPNQTELISGDQNGNIRVWDL 154
Query: 445 LAE 453
A+
Sbjct: 155 RAD 157
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice sites
at introns 4 and 6
Length = 1017
Score = 47.6 bits (108), Expect = 6e-06
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Frame = +1
Query: 268 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSSSRDKTIKLWN- 441
NY S +D ++LWD+ G+ F +H K SV FS ++ S S D ++KLWN
Sbjct: 767 NYLASSDYDGIVKLWDVTTGQAISHFIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWNI 826
Query: 442 TLAECKYTIQDDGHSDWVSCVRSHP 516
C TI++ + V CV+ P
Sbjct: 827 NERNCLGTIRNIAN---VCCVQFSP 848
Score = 30.7 bits (66), Expect = 0.68
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Frame = +1
Query: 247 CCA--SSDGNYALS-GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSR 417
CC S ++ L+ GS D +DL +T +S A +DN +V++S
Sbjct: 842 CCVQFSPQSSHLLAFGSSDFRTYCYDLRNLRTPWCILSGHNKAVSYAKFLDNETLVTAST 901
Query: 418 DKTIKLWN 441
D T+KLW+
Sbjct: 902 DNTLKLWD 909
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 47.6 bits (108), Expect = 6e-06
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV--DNRQIVSSSRDKTIKL 435
D N S S D+T+++W+L + + H K V V + D +++ S D T K+
Sbjct: 154 DTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKV 213
Query: 436 WN-TLAECKYTIQDDGHSDWVSCVRSHPIMP 525
W+ C T+ DGH+ VS V HP +P
Sbjct: 214 WDYQTKSCVQTL--DGHTHNVSAVCFHPELP 242
Score = 44.0 bits (99), Expect = 7e-05
Identities = 18/60 (30%), Positives = 33/60 (55%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
D Y ++GS D T ++WD + + HT +V +V F + I++ S D T+++W+
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Score = 40.7 bits (91), Expect = 6e-04
Identities = 22/85 (25%), Positives = 41/85 (48%)
Frame = +1
Query: 271 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 450
+ L+ + T+ +W+ T+ FE V S F + +V+ + D I+++N
Sbjct: 29 WILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNT 88
Query: 451 ECKYTIQDDGHSDWVSCVRSHPIMP 525
K + + HSD++ CV HP +P
Sbjct: 89 MDKVKVFE-AHSDYIRCVAVHPTLP 112
Score = 35.9 bits (79), Expect = 0.018
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 80 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNY 199
GH+ +V Q+ NPK + S+S D+T+ +W L + N+
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF 179
Score = 34.7 bits (76), Expect = 0.042
Identities = 23/82 (28%), Positives = 40/82 (48%)
Frame = +1
Query: 271 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 450
+ ++G+ D +R+++ + FE H+ + VA ++SSS D IKLW+
Sbjct: 71 WVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEN 130
Query: 451 ECKYTIQDDGHSDWVSCVRSHP 516
T +GHS +V V +P
Sbjct: 131 GWACTQIFEGHSHYVMQVVFNP 152
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 47.6 bits (108), Expect = 6e-06
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV--DNRQIVSSSRDKTIKL 435
D N S S D+T+++W+L + + H K V V + D +++ S D T K+
Sbjct: 154 DTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKV 213
Query: 436 WN-TLAECKYTIQDDGHSDWVSCVRSHPIMP 525
W+ C T+ DGH+ VS V HP +P
Sbjct: 214 WDYQTKSCVQTL--DGHTHNVSAVCFHPELP 242
Score = 44.0 bits (99), Expect = 7e-05
Identities = 18/60 (30%), Positives = 33/60 (55%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
D Y ++GS D T ++WD + + HT +V +V F + I++ S D T+++W+
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Score = 40.7 bits (91), Expect = 6e-04
Identities = 22/85 (25%), Positives = 41/85 (48%)
Frame = +1
Query: 271 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 450
+ L+ + T+ +W+ T+ FE V S F + +V+ + D I+++N
Sbjct: 29 WILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNT 88
Query: 451 ECKYTIQDDGHSDWVSCVRSHPIMP 525
K + + HSD++ CV HP +P
Sbjct: 89 MDKVKVFE-AHSDYIRCVAVHPTLP 112
Score = 35.9 bits (79), Expect = 0.018
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 80 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNY 199
GH+ +V Q+ NPK + S+S D+T+ +W L + N+
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF 179
Score = 34.7 bits (76), Expect = 0.042
Identities = 23/82 (28%), Positives = 40/82 (48%)
Frame = +1
Query: 271 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 450
+ ++G+ D +R+++ + FE H+ + VA ++SSS D IKLW+
Sbjct: 71 WVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEN 130
Query: 451 ECKYTIQDDGHSDWVSCVRSHP 516
T +GHS +V V +P
Sbjct: 131 GWACTQIFEGHSHYVMQVVFNP 152
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 47.6 bits (108), Expect = 6e-06
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV--DNRQIVSSSRDKTIKL 435
D N S S D+T+++W+L + + H K V V + D +++ S D T K+
Sbjct: 154 DTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKV 213
Query: 436 WN-TLAECKYTIQDDGHSDWVSCVRSHPIMP 525
W+ C T+ DGH+ VS V HP +P
Sbjct: 214 WDYQTKSCVQTL--DGHTHNVSAVCFHPELP 242
Score = 44.0 bits (99), Expect = 7e-05
Identities = 18/60 (30%), Positives = 33/60 (55%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
D Y ++GS D T ++WD + + HT +V +V F + I++ S D T+++W+
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Score = 40.7 bits (91), Expect = 6e-04
Identities = 22/85 (25%), Positives = 41/85 (48%)
Frame = +1
Query: 271 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 450
+ L+ + T+ +W+ T+ FE V S F + +V+ + D I+++N
Sbjct: 29 WILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNT 88
Query: 451 ECKYTIQDDGHSDWVSCVRSHPIMP 525
K + + HSD++ CV HP +P
Sbjct: 89 MDKVKVFE-AHSDYIRCVAVHPTLP 112
Score = 35.9 bits (79), Expect = 0.018
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 80 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNY 199
GH+ +V Q+ NPK + S+S D+T+ +W L + N+
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNF 179
Score = 34.7 bits (76), Expect = 0.042
Identities = 23/82 (28%), Positives = 40/82 (48%)
Frame = +1
Query: 271 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 450
+ ++G+ D +R+++ + FE H+ + VA ++SSS D IKLW+
Sbjct: 71 WVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEN 130
Query: 451 ECKYTIQDDGHSDWVSCVRSHP 516
T +GHS +V V +P
Sbjct: 131 GWACTQIFEGHSHYVMQVVFNP 152
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 46.8 bits (106), Expect = 1e-05
Identities = 23/83 (27%), Positives = 42/83 (50%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 435
SSDG ++GS DK L++W L G + H V+ V F + + S +D+ +K
Sbjct: 591 SSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGKDRLVKY 650
Query: 436 WNTLAECKYTIQDDGHSDWVSCV 504
W+ + ++ + +GH + C+
Sbjct: 651 WDA-DKFEHLLTLEGHHAEIWCL 672
Score = 44.0 bits (99), Expect = 7e-05
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = +1
Query: 265 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNT 444
G+ SGS D + LWD+ R H V + F +++VSSS+DK +++W+
Sbjct: 118 GSMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDL 177
Query: 445 LAECKYTIQDDGHSD 489
+ I HS+
Sbjct: 178 ETQHCMQIVSGHHSE 192
Score = 39.9 bits (89), Expect = 0.001
Identities = 23/82 (28%), Positives = 37/82 (45%)
Frame = +1
Query: 253 ASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 432
ASS + G D ++R+WD G F H V ++ ++ + S S+D I
Sbjct: 72 ASSASSLVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDII 131
Query: 433 LWNTLAECKYTIQDDGHSDWVS 498
LW+ + E + GH D V+
Sbjct: 132 LWDVVGE-SGLFRLRGHRDQVT 152
Score = 33.5 bits (73), Expect = 0.096
Identities = 20/78 (25%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 435
S D + D T++++ + + K H V+ + S D IV+ S+DK +K+
Sbjct: 549 SPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLKI 608
Query: 436 WN-TLAECKYTIQDDGHS 486
W +C +I G S
Sbjct: 609 WGLDFGDCHKSIFAHGDS 626
Score = 31.1 bits (67), Expect = 0.51
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +2
Query: 83 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVVRL 259
H G VT + N K M+ S S+D +I+W + + + RL GH ++D+V L
Sbjct: 105 HKGAVTALRYN-KVGSMLASGSKDNDIILWDVVGESGLF-----RLRGHRDQVTDLVFL 157
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/62 (22%), Positives = 29/62 (46%)
Frame = +1
Query: 268 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTL 447
+Y S D+ ++ WD + E H ++ +A S +V+ S D++++ W+
Sbjct: 637 HYLFSIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWDRS 696
Query: 448 AE 453
E
Sbjct: 697 EE 698
Score = 27.9 bits (59), Expect = 4.8
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +1
Query: 361 DVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECKYTIQDDGHSDWVSCV 504
DVL+VA S D + I + D T+K++ + K+ + GH V C+
Sbjct: 542 DVLAVAISPDAKHIAVALLDSTVKVF-YMDSLKFYLSLYGHKLPVMCI 588
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 46.8 bits (106), Expect = 1e-05
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV--DNRQIVSSSRDKTIKL 435
D N S S D+T+++W+L + + H K V V + D +++ S D T K+
Sbjct: 154 DTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTAKV 213
Query: 436 WN-TLAECKYTIQDDGHSDWVSCVRSHPIMP 525
W+ C T+ +GH+ VS V HP +P
Sbjct: 214 WDYQTKSCVQTL--EGHTHNVSAVSFHPELP 242
Score = 45.6 bits (103), Expect = 2e-05
Identities = 19/60 (31%), Positives = 34/60 (56%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
D Y ++GS D T ++WD + E HT +V +V+F + I++ S D T+++W+
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWH 257
Score = 38.3 bits (85), Expect = 0.003
Identities = 20/85 (23%), Positives = 40/85 (47%)
Frame = +1
Query: 271 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 450
+ L+ + TL +W+ + F+ V S F + +V+ + D I+++N
Sbjct: 29 WILASLYSGTLCIWNYQTQTMVKSFDVTELPVRSAKFIARKQWVVAGADDMFIRVYNYNT 88
Query: 451 ECKYTIQDDGHSDWVSCVRSHPIMP 525
K + + H+D++ CV HP +P
Sbjct: 89 MDKIKVFE-AHADYIRCVAVHPTLP 112
Score = 35.9 bits (79), Expect = 0.018
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 80 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNY 199
GH+ +V Q+ NPK + S+S D+T+ +W L + N+
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF 179
Score = 34.7 bits (76), Expect = 0.042
Identities = 23/82 (28%), Positives = 39/82 (47%)
Frame = +1
Query: 271 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 450
+ ++G+ D +R+++ + FE H + VA ++SSS D IKLW+
Sbjct: 71 WVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEK 130
Query: 451 ECKYTIQDDGHSDWVSCVRSHP 516
T +GHS +V V +P
Sbjct: 131 GWLCTQIFEGHSHYVMQVTFNP 152
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 46.4 bits (105), Expect = 1e-05
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Frame = +1
Query: 259 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSSSRDKTIKL 435
S + LS S DKT+RLWDL++ KT + H+ V + F+ VD+ +S S D +++
Sbjct: 477 SKSQHLLSSSMDKTVRLWDLSS-KTCLKVFSHSDYVTCIQFNPVDDNYFISGSLDAKVRI 535
Query: 436 WN 441
W+
Sbjct: 536 WS 537
Score = 45.2 bits (102), Expect = 3e-05
Identities = 21/59 (35%), Positives = 40/59 (67%)
Frame = +1
Query: 343 FEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRSHPI 519
F H DVL +++S ++ ++SSS DKT++LW+ + K ++ HSD+V+C++ +P+
Sbjct: 464 FVGHLDDVLDLSWS-KSQHLLSSSMDKTVRLWDLSS--KTCLKVFSHSDYVTCIQFNPV 519
Score = 29.9 bits (64), Expect = 1.2
Identities = 17/61 (27%), Positives = 30/61 (49%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
D NY +SGS D +R+W + + + D + V + ++ D + + S T L+N
Sbjct: 520 DDNYFISGSLDAKVRIWSIPDHQVV-DWNDLHEMVTAACYTPDGQGALVGSYKGTCCLYN 578
Query: 442 T 444
T
Sbjct: 579 T 579
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV--DNRQIVSSSRDKTIKL 435
D N S S D+T+++W+L + + H K V V + D +++ S D T K+
Sbjct: 154 DTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKV 213
Query: 436 WN-TLAECKYTIQDDGHSDWVSCVRSHPIMP 525
W+ C T+ +GH+ VS V HP +P
Sbjct: 214 WDYQTKSCVQTL--EGHTHNVSAVCFHPELP 242
Score = 45.2 bits (102), Expect = 3e-05
Identities = 19/60 (31%), Positives = 33/60 (55%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
D Y ++GS D T ++WD + E HT +V +V F + I++ S D T+++W+
Sbjct: 198 DKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWH 257
Score = 40.3 bits (90), Expect = 8e-04
Identities = 22/85 (25%), Positives = 40/85 (47%)
Frame = +1
Query: 271 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 450
+ L+ + TL +W+ + FE V S F + +V+ + D I+++N
Sbjct: 29 WILASLYSGTLCIWNYQTQVMAKSFEVTELPVRSAKFVARKQWVVAGADDMYIRVYNYNT 88
Query: 451 ECKYTIQDDGHSDWVSCVRSHPIMP 525
K + + HSD++ CV HP +P
Sbjct: 89 MDKVKVFE-AHSDYIRCVAVHPTLP 112
Score = 35.9 bits (79), Expect = 0.018
Identities = 23/82 (28%), Positives = 40/82 (48%)
Frame = +1
Query: 271 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 450
+ ++G+ D +R+++ + FE H+ + VA ++SSS D IKLW+
Sbjct: 71 WVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEK 130
Query: 451 ECKYTIQDDGHSDWVSCVRSHP 516
T +GHS +V V +P
Sbjct: 131 GWACTQIFEGHSHYVMQVTFNP 152
Score = 35.9 bits (79), Expect = 0.018
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +2
Query: 80 GHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNY 199
GH+ +V Q+ NPK + S+S D+T+ +W L + N+
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNF 179
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 45.6 bits (103), Expect = 2e-05
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ-IVSSSRDKTIK 432
+SDG+ +S S DKT+R WD+ GK ++ +H+ V S + I+S S D T K
Sbjct: 105 TSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAK 164
Query: 433 LWN 441
LW+
Sbjct: 165 LWD 167
Score = 42.7 bits (96), Expect = 2e-04
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDL----AAGKTTRRFEDH----TKDVLSVAFSVDNRQIVSS 411
S DG+Y L+ D L +WD+ + + FE H K++L ++S D ++ +
Sbjct: 231 SPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAG 290
Query: 412 SRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRSHPIMP 525
S D+ + +W+T + + + GH+ V+ HP P
Sbjct: 291 SSDRMVHIWDTTSR-RTIYKLPGHTGSVNECVFHPTEP 327
Score = 41.9 bits (94), Expect = 3e-04
Identities = 26/91 (28%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = +1
Query: 247 CCASSDGN-YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDK 423
CC + G +SGS D T +LWD+ + F D + + +V+FS +I + D
Sbjct: 144 CCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDKYQ-ITAVSFSDAADKIFTGGVDN 202
Query: 424 TIKLWNTLAECKYTIQDDGHSDWVSCVRSHP 516
+K+W+ L + + T+ +GH D ++ + P
Sbjct: 203 DVKVWD-LRKGEATMTLEGHQDTITGMSLSP 232
Score = 39.5 bits (88), Expect = 0.001
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 265 GNYALSGSWDKTLRLWDLAAG-KTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
G SGS D+ + LW + K + H +L + ++ D QIVS+S DKT++ W+
Sbjct: 65 GTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWD 124
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = +1
Query: 247 CCASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 426
C S DG +GS D+ + +WD + +T + HT V F I S S DK
Sbjct: 278 CSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSCSSDKN 337
Query: 427 IKL 435
I L
Sbjct: 338 IYL 340
Score = 37.1 bits (82), Expect = 0.008
Identities = 13/54 (24%), Positives = 28/54 (51%)
Frame = +1
Query: 280 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
+G D +++WDL G+ T E H + ++ S D ++++ D + +W+
Sbjct: 197 TGGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWD 250
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 352 HTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECKYTIQDDGHSD 489
H V ++ F+ I S S D+ I LW +CK + GH +
Sbjct: 52 HPSAVYTMKFNPAGTLIASGSHDREIFLWRVHGDCKNFMVLKGHKN 97
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 45.6 bits (103), Expect = 2e-05
Identities = 23/80 (28%), Positives = 41/80 (51%)
Frame = +1
Query: 277 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAEC 456
+SG D +++W+ + H + +V F +N IVS+S D+TI++WN +
Sbjct: 67 VSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNWQSRT 126
Query: 457 KYTIQDDGHSDWVSCVRSHP 516
++ GH+ +V C HP
Sbjct: 127 CISVL-TGHNHYVMCASFHP 145
Score = 43.6 bits (98), Expect = 9e-05
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +1
Query: 301 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN-TLAECKYTIQDD 477
++LWD G RF++H V V F VS D IK+WN C +T+
Sbjct: 33 IQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLL-- 90
Query: 478 GHSDWVSCVRSH 513
GH D++ V+ H
Sbjct: 91 GHLDYIRTVQFH 102
Score = 36.3 bits (80), Expect = 0.014
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +1
Query: 277 LSGSWDKTLRLWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
+SG+ D+ ++LW + K H +V SV F IVS+S DK+I++W+
Sbjct: 220 VSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWD 276
Score = 35.5 bits (78), Expect = 0.024
Identities = 15/57 (26%), Positives = 31/57 (54%)
Frame = +1
Query: 271 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
+ +S S D+T+R+W+ + H V+ +F +VS+S D+T+++W+
Sbjct: 107 WIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWD 163
Score = 35.5 bits (78), Expect = 0.024
Identities = 26/88 (29%), Positives = 40/88 (45%)
Frame = +2
Query: 74 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHFISDVV 253
L GHN +V + +PK D+++S+S D+T+ VW + + P L S SD+
Sbjct: 131 LTGHNHYVMCASFHPK-EDLVVSASLDQTVRVWDIGALKKKSASPADDLMRFSQMNSDLF 189
Query: 254 RLVTVITHFPVLGTRLCVCGISLQARLP 337
V I + + G V S LP
Sbjct: 190 GGVDAIVKYVLEGHDRGVNWASFHPTLP 217
Score = 33.5 bits (73), Expect = 0.096
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +2
Query: 41 KMSETLKLR-GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 184
+M+ET TLRGH V+ + + K D+I+S+S DK++ VW T+
Sbjct: 232 RMNETKAWEVDTLRGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWDATK 279
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 45.2 bits (102), Expect = 3e-05
Identities = 17/52 (32%), Positives = 31/52 (59%)
Frame = +1
Query: 292 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTL 447
D +RL+D+ K R F HT + + FS D + ++SSS D ++++W+ +
Sbjct: 536 DFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWDVI 587
Score = 32.7 bits (71), Expect = 0.17
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 250 CASSDGNYALSGSWDKTLRLWDLAAGK 330
C S DG + +S S D +LR+WD+ K
Sbjct: 564 CFSEDGKWVISSSMDGSLRIWDVILAK 590
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 45.2 bits (102), Expect = 3e-05
Identities = 25/83 (30%), Positives = 39/83 (46%), Gaps = 1/83 (1%)
Frame = +1
Query: 271 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN-TL 447
+ S +D R+WDL + F+ H K VLSV FS + + S D ++W+ +
Sbjct: 144 FKASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRM 203
Query: 448 AECKYTIQDDGHSDWVSCVRSHP 516
+ Y I H + VS V+ P
Sbjct: 204 RKLLYII--PAHVNLVSQVKYEP 224
Score = 34.7 bits (76), Expect = 0.042
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +1
Query: 247 CCASSDGNYALSGSWDKTLRLWDLAAGKTTRRF---EDHTKDVLSVAFS-VDNRQIVSSS 414
C S DG ++ S +LW++ + T + + H + V V FS VD+ + ++S
Sbjct: 69 CSLSRDGKILVTCSLSGVPKLWEVP--QVTNKIVVLKGHKEHVTDVVFSSVDDECLATAS 126
Query: 415 RDKTIKLWNT 444
D+T K+W T
Sbjct: 127 TDRTEKIWKT 136
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 44.8 bits (101), Expect = 4e-05
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ-IVSSSRDKTIK 432
+ +GN+ L+ S D+ ++L+D+ K + F HTKDV S+A+ + + VS S D +I
Sbjct: 319 NQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSIC 378
Query: 433 LWNTLAECKYTIQDDGHSDWVSCVRSHPI 519
W E + H + V + HPI
Sbjct: 379 HWIVGHENPQIEIPNAHDNSVWDLAWHPI 407
Score = 43.2 bits (97), Expect = 1e-04
Identities = 23/80 (28%), Positives = 44/80 (55%)
Frame = +1
Query: 277 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAEC 456
+SG D+ ++LWD +G+ H VLSV ++ + ++++S+D+ IKL++ +
Sbjct: 284 VSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQIIKLYD-IRTM 342
Query: 457 KYTIQDDGHSDWVSCVRSHP 516
K GH+ V+ + HP
Sbjct: 343 KELQSFRGHTKDVTSLAWHP 362
Score = 33.5 bits (73), Expect = 0.096
Identities = 16/62 (25%), Positives = 28/62 (45%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 435
S + NY +SG TL+ W H + + ++F + + S S D T+K+
Sbjct: 174 SHNENYMVSGDDGGTLKYWQNNMNNVKANKTAHKESIRDLSFCKTDLKFCSCSDDTTVKV 233
Query: 436 WN 441
W+
Sbjct: 234 WD 235
Score = 30.3 bits (65), Expect = 0.89
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +2
Query: 53 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIP 208
T+K + RGH VT +A +P + + +S S D ++ W + + IP
Sbjct: 341 TMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGHENPQIEIP 392
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 352 HTKDVLSVAFSVDNRQIVSSSRDKTIKLWNT 444
H DV SV + +VS +D+ +KLW+T
Sbjct: 267 HGWDVKSVDWHPTKSLLVSGGKDQLVKLWDT 297
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 44.8 bits (101), Expect = 4e-05
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 268 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI-VSSSRDKTIKL 435
N SGS DK +++WD+A GK E H K V +VA++ ++ +S SRD+T+ L
Sbjct: 228 NIVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVL 284
Score = 35.1 bits (77), Expect = 0.031
Identities = 26/97 (26%), Positives = 46/97 (47%), Gaps = 6/97 (6%)
Frame = +1
Query: 265 GNYALSGSWDKTLRLWDL----AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSS-SRDKTI 429
GN+ G+ + ++ +WDL + + + + F+ +NR IV+S S DK +
Sbjct: 180 GNFVAIGTMESSIEIWDLDLVNEVLPCVQLGRIAGQTLFFLTFNWENRNIVASGSEDKKV 239
Query: 430 KLWN-TLAECKYTIQDDGHSDWVSCVRSHPIMPTPLL 537
K+W+ +CK T++ H V V + P LL
Sbjct: 240 KVWDVATGKCKVTMEH--HEKKVHAVAWNNYTPEVLL 274
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 44.8 bits (101), Expect = 4e-05
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +1
Query: 247 CCASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSSSRDK 423
C S NY S +D +++WD G+ ++ +H K SV FS D + VS S D
Sbjct: 772 CWNSYIKNYLASTDYDGVVQIWDAGTGQGFSQYTEHQKRAWSVDFSPSDPTKFVSGSDDC 831
Query: 424 TIKLWN 441
++KLW+
Sbjct: 832 SVKLWS 837
Score = 37.5 bits (83), Expect = 0.006
Identities = 28/69 (40%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Frame = +1
Query: 247 CCA--SSDGNYALS-GSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSSS 414
CC SS N+ L+ GS D + +DL KT H K V V F +D+ IVS+S
Sbjct: 854 CCVQFSSYSNHLLAFGSADYKVYCYDLRYVKTPWCTLAGHEKAVSYVKF-MDSETIVSAS 912
Query: 415 RDKTIKLWN 441
D ++KLWN
Sbjct: 913 TDNSLKLWN 921
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 44.4 bits (100), Expect = 5e-05
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFED-HTK-DVLSVAFSVDNRQIVSSSRDKTI 429
SS G+ ++ S D +RL+D + K R + H K +V S F+ D R ++SS +D T+
Sbjct: 183 SSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTV 242
Query: 430 KLW 438
KLW
Sbjct: 243 KLW 245
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 44.4 bits (100), Expect = 5e-05
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFED-HTK-DVLSVAFSVDNRQIVSSSRDKTI 429
SS G+ ++ S D +RL+D + K R + H K +V S F+ D R ++SS +D T+
Sbjct: 275 SSTGSIYITASKDGAIRLFDGVSAKCVRSIGNAHGKSEVTSAVFTKDQRFVLSSGKDSTV 334
Query: 430 KLW 438
KLW
Sbjct: 335 KLW 337
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 44.4 bits (100), Expect = 5e-05
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +1
Query: 280 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECK 459
SGSWDKTL++W L+ K + H + +VA D+ + + S D T+K+W + K
Sbjct: 266 SGSWDKTLKVWRLSDSKCLESIQAHDDAINTVAAGFDD-LLFTGSADGTLKVWKRELQGK 324
Query: 460 YT 465
T
Sbjct: 325 GT 326
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 44.4 bits (100), Expect = 5e-05
Identities = 21/53 (39%), Positives = 30/53 (56%)
Frame = +1
Query: 280 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 438
SGSWDKTL++W L+ K E H V +V D+ + + S D T+K+W
Sbjct: 262 SGSWDKTLKVWRLSDSKCLESIEAHDDAVNTVVSGFDD-LVFTGSADGTLKVW 313
Score = 27.5 bits (58), Expect = 6.3
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 352 HTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRS 510
H V ++ + D + S S DKT+K+W L++ K + H D V+ V S
Sbjct: 244 HFDAVSCLSLNEDLGLLYSGSWDKTLKVWR-LSDSKCLESIEAHDDAVNTVVS 295
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 44.0 bits (99), Expect = 7e-05
Identities = 22/54 (40%), Positives = 32/54 (59%)
Frame = +1
Query: 277 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 438
+SGS D + +W+L G+ + + H V VA +DN IVSSS D+T+K W
Sbjct: 87 VSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVA--IDNEDIVSSSVDQTLKRW 138
Score = 36.3 bits (80), Expect = 0.014
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +2
Query: 59 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 238
KLR L GH+ V I + I +SSRD+T+ VW L + +K L GH+ F
Sbjct: 11 KLRCELHGHDDDVRGICVCND--ENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSF 68
Query: 239 I 241
+
Sbjct: 69 V 69
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 352 HTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
H DV + D I +SSRD+TI++W+
Sbjct: 19 HDDDVRGICVCNDEN-IATSSRDRTIRVWS 47
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 44.0 bits (99), Expect = 7e-05
Identities = 22/54 (40%), Positives = 32/54 (59%)
Frame = +1
Query: 277 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 438
+SGS D + +W+L G+ + + H V VA +DN IVSSS D+T+K W
Sbjct: 87 VSGSMDTFVFVWNLMNGENIQTLKGHQMQVTGVA--IDNEDIVSSSVDQTLKRW 138
Score = 36.3 bits (80), Expect = 0.014
Identities = 22/61 (36%), Positives = 31/61 (50%)
Frame = +2
Query: 59 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYGHSHF 238
KLR L GH+ V I + I +SSRD+T+ VW L + +K L GH+ F
Sbjct: 11 KLRCELHGHDDDVRGICVCND--ENIATSSRDRTIRVWSLDPSDKRKYTSEKILLGHTSF 68
Query: 239 I 241
+
Sbjct: 69 V 69
Score = 27.1 bits (57), Expect = 8.3
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 352 HTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
H DV + D I +SSRD+TI++W+
Sbjct: 19 HDDDVRGICVCNDEN-IATSSRDRTIRVWS 47
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 44.0 bits (99), Expect = 7e-05
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +1
Query: 259 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSSSRDKTIKL 435
S+ Y LS S D+T+RLW + + R F H V VAF+ VD+ +S S D +++
Sbjct: 331 SEKGYLLSSSVDETVRLWRVGCDECLRTF-THNNFVTCVAFNPVDDNYFISGSIDGKVRI 389
Query: 436 WNTLAECK 459
W+ + C+
Sbjct: 390 WD-VTRCR 396
Score = 30.3 bits (65), Expect = 0.89
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 83 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 184
HN +VT +A NP + +S S D + +W +TR
Sbjct: 361 HNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTR 394
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 44.0 bits (99), Expect = 7e-05
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +1
Query: 259 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSSSRDKTIKL 435
S+ Y LS S D+T+RLW + + R F H V VAF+ VD+ +S S D +++
Sbjct: 331 SEKGYLLSSSVDETVRLWRVGCDECLRTF-THNNFVTCVAFNPVDDNYFISGSIDGKVRI 389
Query: 436 WNTLAECK 459
W+ + C+
Sbjct: 390 WD-VTRCR 396
Score = 30.3 bits (65), Expect = 0.89
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 83 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 184
HN +VT +A NP + +S S D + +W +TR
Sbjct: 361 HNNFVTCVAFNPVDDNYFISGSIDGKVRIWDVTR 394
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 43.6 bits (98), Expect = 9e-05
Identities = 20/61 (32%), Positives = 30/61 (49%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 435
S DG S SWD+TL++W K F + D ++ +N I + S D+ IK+
Sbjct: 174 SRDGTLLYSVSWDRTLKIWRTTDFKCLESFTNAHDDAINAVALSENGDIYTGSSDQRIKV 233
Query: 436 W 438
W
Sbjct: 234 W 234
Score = 32.3 bits (70), Expect = 0.22
Identities = 24/88 (27%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Frame = +1
Query: 253 ASSDGNYALSGSWDKTLRLWDLAAGK---TTRRFEDHTKDVLSVAFSVDNRQIVSSSRDK 423
+ ++G+ SG D ++ +W+ G HT+ VL +A D + S S DK
Sbjct: 268 SGTNGSLLHSGGSDGSILVWERDDGGDIVVVGMLRGHTESVLCLAVVSDI--LCSGSADK 325
Query: 424 TIKLWNTLA-ECKYTIQDDGHSDWVSCV 504
T++LW A + +GH V C+
Sbjct: 326 TVRLWKCSAKDYSCLAMLEGHLGPVKCL 353
Score = 27.9 bits (59), Expect = 4.8
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +1
Query: 352 HTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTL-AECKYTIQDDGHSDWVSCV 504
H V +A S D + S S D+T+K+W T +C + + H D ++ V
Sbjct: 164 HVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTDFKCLESF-TNAHDDAINAV 214
Score = 27.5 bits (58), Expect = 6.3
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +2
Query: 68 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 175
G LRGH V +A D++ S S DKT+ +WK
Sbjct: 299 GMLRGHTESVLCLAV---VSDILCSGSADKTVRLWK 331
Score = 27.1 bits (57), Expect = 8.3
Identities = 25/77 (32%), Positives = 34/77 (44%), Gaps = 11/77 (14%)
Frame = +1
Query: 250 CASSDGNYALSGSWDKTLRLWDLAAG--KTTRRFEDHTKDV--LSVAFSVDNRQ------ 399
C + + SGS DKT+RLW +A E H V L+ AF D+R+
Sbjct: 310 CLAVVSDILCSGSADKTVRLWKCSAKDYSCLAMLEGHLGPVKCLTGAFR-DSRKADEASY 368
Query: 400 -IVSSSRDKTIKLWNTL 447
I S D +K+W L
Sbjct: 369 HIYSGGLDSQVKVWQVL 385
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 43.6 bits (98), Expect = 9e-05
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = +1
Query: 250 CASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 429
C + G SGS DKT+++WDL + + HT V S+ ++ ++SSS D TI
Sbjct: 263 CFAVGGQMLYSGSVDKTIKMWDLNTLQCIMTLKQHTGTVTSLL--CWDKCLISSSLDGTI 320
Query: 430 KLW 438
K+W
Sbjct: 321 KVW 323
Score = 30.3 bits (65), Expect = 0.89
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +1
Query: 346 EDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW--NTLAECKYTIQ 471
E H+ +V F+V + + S S DKTIK+W NTL +C T++
Sbjct: 255 EGHSGEV--TCFAVGGQMLYSGSVDKTIKMWDLNTL-QCIMTLK 295
Score = 29.5 bits (63), Expect = 1.6
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +2
Query: 47 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 178
S+ K +L GH+G VT A + M+ S S DKT+ +W L
Sbjct: 245 SDPFKYLTSLEGHSGEVTCFAVGGQ---MLYSGSVDKTIKMWDL 285
Score = 27.5 bits (58), Expect = 6.3
Identities = 20/91 (21%), Positives = 37/91 (40%), Gaps = 2/91 (2%)
Frame = +1
Query: 220 IRSFALHF*CCASSDGNYALSGSWDKTLRLWDLAAGKT-TRRFEDHTKDVLSVAFSVDNR 396
+RS +L C G + L W G E H K++ +A +
Sbjct: 85 MRSSSLRKWVCKYWKDGKCKRGEQCQFLHSWSCFPGLAMVASLEGHNKELKGIALPEGSD 144
Query: 397 QIVSSSRDKTIKLWN-TLAECKYTIQDDGHS 486
++ S S D T+++W+ +C ++I D +
Sbjct: 145 KLFSVSIDGTLRVWDCNSGQCVHSINLDAEA 175
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 43.6 bits (98), Expect = 9e-05
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN-RQIVSSSRDKTIK 432
S+DG ++GS D ++ ++DL A + + R HT DV +V F+ ++ I+S S D K
Sbjct: 238 STDGREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNLILSGSDDNLCK 297
Query: 433 LWN 441
+W+
Sbjct: 298 VWD 300
Score = 43.6 bits (98), Expect = 9e-05
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Frame = +1
Query: 247 CCASSDGNYALSGSWDKTLRLWD----LAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSS 414
C A GN LSGS D ++WD + K H + V + D R +S+
Sbjct: 278 CFADESGNLILSGSDDNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNG 337
Query: 415 RDKTIKLWN 441
+D+TIKLW+
Sbjct: 338 KDQTIKLWD 346
Score = 27.9 bits (59), Expect = 4.8
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDL 318
DG Y +S D+T++LWD+
Sbjct: 329 DGRYFISNGKDQTIKLWDI 347
Score = 27.9 bits (59), Expect = 4.8
Identities = 19/80 (23%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +1
Query: 202 YTSKAFIRSFALHF*CCASSDGN-YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 378
Y + +R+ + A S G Y +GS D ++ ++DL +G + H+ V
Sbjct: 391 YKGHSVLRTLIRCYFSPAHSTGQKYIYTGSNDSSVYIYDLVSGDKVAVLKHHSSPVRDCN 450
Query: 379 FSVDNRQIVSSSRDKTIKLW 438
+ ++SSS D + W
Sbjct: 451 WHPYYPTLISSSWDGDLVKW 470
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 43.6 bits (98), Expect = 9e-05
Identities = 24/76 (31%), Positives = 35/76 (46%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 435
S D + SGS D T+ +W++ G T H V V + I S S DKT+ +
Sbjct: 127 SPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPIGSFIASQSDDKTVII 186
Query: 436 WNTLAECKYTIQDDGH 483
W T ++ + DGH
Sbjct: 187 WRT-SDWGMAHRTDGH 201
Score = 35.5 bits (78), Expect = 0.024
Identities = 21/69 (30%), Positives = 30/69 (43%)
Frame = +1
Query: 313 DLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECKYTIQDDGHSDW 492
D+ K HT DV+ + +S D+ + S S D T+ +WN T+ GH
Sbjct: 104 DVENWKAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVL-RGHLSL 162
Query: 493 VSCVRSHPI 519
V V PI
Sbjct: 163 VKGVTWDPI 171
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 74 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 175
LRGH V + +P I S S DKT+I+W+
Sbjct: 156 LRGHLSLVKGVTWDP-IGSFIASQSDDKTVIIWR 188
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 43.2 bits (97), Expect = 1e-04
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +1
Query: 259 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSSSRDKTIKL 435
S NY LS S DKT+RLW + + F H V SV F+ V+ +S S D +++
Sbjct: 337 SKDNYLLSASMDKTVRLWKVGSNDCLGVFA-HNSYVTSVQFNPVNENYFMSGSIDGKVRI 395
Query: 436 WN 441
WN
Sbjct: 396 WN 397
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 77 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 178
RGH G V I+ + + +LS+S DKT+ +WK+
Sbjct: 325 RGHTGEVLDISWSKD--NYLLSASMDKTVRLWKV 356
Score = 27.9 bits (59), Expect = 4.8
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +1
Query: 268 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS-VAFSVDNRQIVSSSRDKTIKLWNT 444
NY +SGS D +R+W++ +G + + D KD++S V + D + + S + + + +N
Sbjct: 382 NYFMSGSIDGKVRIWNI-SGCSVVDWAD-LKDIISAVCYRPDGQGGIIGSLNGSCRFFNM 439
Query: 445 LAE 453
E
Sbjct: 440 SGE 442
Score = 27.5 bits (58), Expect = 6.3
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +2
Query: 83 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 181
HN +VT + NP + +S S D + +W ++
Sbjct: 367 HNSYVTSVQFNPVNENYFMSGSIDGKVRIWNIS 399
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 43.2 bits (97), Expect = 1e-04
Identities = 21/59 (35%), Positives = 40/59 (67%)
Frame = +1
Query: 343 FEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRSHPI 519
F H DVL +++S ++ ++SSS DKT++LW+ E + ++ H+D+V+CV+ +P+
Sbjct: 515 FTGHLDDVLDLSWS-RSQLLLSSSMDKTVRLWD--IETQSCLKLFAHNDYVTCVQFNPL 570
Score = 41.1 bits (92), Expect = 5e-04
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 277 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSSSRDKTIKLWN 441
LS S DKT+RLWD+ + F H V V F+ +D +S S D I++WN
Sbjct: 534 LSSSMDKTVRLWDIETQSCLKLFA-HNDYVTCVQFNPLDEDYFISGSLDAKIRIWN 588
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 74 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 181
L HN +VT + NP D +S S D + +W ++
Sbjct: 555 LFAHNDYVTCVQFNPLDEDYFISGSLDAKIRIWNIS 590
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/66 (24%), Positives = 35/66 (53%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
D +Y +SGS D +R+W++ + + + D + V +V ++ D + S + +L++
Sbjct: 571 DEDYFISGSLDAKIRIWNI-SNRQVVEWNDLKEMVTAVCYTPDGQAAFVGSINGHCRLYS 629
Query: 442 TLAECK 459
+CK
Sbjct: 630 A-EDCK 634
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 43.2 bits (97), Expect = 1e-04
Identities = 25/74 (33%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +1
Query: 247 CCASSDGNYAL-SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDK 423
C + +D L S SWD+T+++W +A K H V SV S + S S D
Sbjct: 211 CLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNSVV-STTEAIVFSGSADG 269
Query: 424 TIKLWNTLAECKYT 465
T+K W + KYT
Sbjct: 270 TVKAWKRDQQGKYT 283
Score = 28.7 bits (61), Expect = 2.7
Identities = 27/97 (27%), Positives = 37/97 (38%), Gaps = 11/97 (11%)
Frame = +1
Query: 181 QRRKQLRYTSKAFIRSFALHF*CCASSDGNYALSGSWDKTLRLWDLAAGKTT--RRFEDH 354
+R KQL Y A+ C G+ SGS DKT+ +W T H
Sbjct: 323 EREKQLNYGGILKGHKLAV---LCLEVAGSLVFSGSADKTICVWKRDGNIHTCLSVLTGH 379
Query: 355 TKDVLSVAFSVDNRQ---------IVSSSRDKTIKLW 438
T V +A D + S S DK++K+W
Sbjct: 380 TGPVKCLAVEADREASERRDKKWIVYSGSLDKSVKVW 416
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 43.2 bits (97), Expect = 1e-04
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Frame = +1
Query: 247 CCASSDGNYALSGSWDKTLRLWDLAAGKTTRRF----EDHTKDVLSVAFSVDNRQIVSSS 414
C DG G D ++++W L G +R + HT D+ SV FS D R ++S S
Sbjct: 333 CAWDRDGKRIAGGVGDGSIQIWSLKPGWGSRPDIYVGKAHTDDITSVKFSSDGRILLSRS 392
Query: 415 RDKTIKLWN 441
D ++K+W+
Sbjct: 393 FDGSLKVWD 401
Score = 31.5 bits (68), Expect = 0.39
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRR-FE--DHTKDVLSVAFSVDNRQIVSSS 414
SSDG LS S+D +L++WDL K + FE + +VAFS D + I++ +
Sbjct: 382 SSDGRILLSRSFDGSLKVWDLRQMKEALKVFEGLPNYYPQTNVAFSPDEQIILTGT 437
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 43.2 bits (97), Expect = 1e-04
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +1
Query: 301 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN-TLAECKYTIQDD 477
++LWD G RF++H V V F VS D IK+WN C +T+
Sbjct: 33 IQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLL-- 90
Query: 478 GHSDWVSCVRSHPIMP 525
GH D++ V+ H P
Sbjct: 91 GHLDYIRTVQFHHEYP 106
Score = 41.5 bits (93), Expect = 4e-04
Identities = 22/80 (27%), Positives = 40/80 (50%)
Frame = +1
Query: 277 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAEC 456
+SG D +++W+ + H + +V F + IVS+S D+TI++WN +
Sbjct: 67 VSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRT 126
Query: 457 KYTIQDDGHSDWVSCVRSHP 516
++ GH+ +V C HP
Sbjct: 127 CVSVL-TGHNHYVMCASFHP 145
Score = 37.5 bits (83), Expect = 0.006
Identities = 18/66 (27%), Positives = 35/66 (53%)
Frame = +1
Query: 271 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 450
+ +S S D+T+R+W+ + H V+ +F +VS+S D+T+++W+ A
Sbjct: 107 WIVSASDDQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGA 166
Query: 451 ECKYTI 468
K T+
Sbjct: 167 LRKKTV 172
Score = 37.5 bits (83), Expect = 0.006
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 3/85 (3%)
Frame = +1
Query: 277 LSGSWDKTLRLWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN-TL 447
+SG+ D+ ++LW + K H +V SV F IVS+S DK+I++W+ T
Sbjct: 220 VSGADDRQVKLWRMNETKAWEVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATK 279
Query: 448 AECKYTIQDDGHSDWVSCVRSHPIM 522
T + + W+ V HP M
Sbjct: 280 RTGLQTFRREHDRFWILAV--HPEM 302
Score = 33.5 bits (73), Expect = 0.096
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Frame = +2
Query: 41 KMSETLKLR-GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 184
+M+ET TLRGH V+ + + K D+I+S+S DK++ VW T+
Sbjct: 232 RMNETKAWEVDTLRGHMNNVSSVMFHAKQ-DIIVSNSEDKSIRVWDATK 279
Score = 31.1 bits (67), Expect = 0.51
Identities = 14/35 (40%), Positives = 24/35 (68%)
Frame = +2
Query: 74 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 178
L GHN +V + +PK D+++S+S D+T+ VW +
Sbjct: 131 LTGHNHYVMCASFHPK-EDLVVSASLDQTVRVWDI 164
Score = 27.1 bits (57), Expect = 8.3
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +1
Query: 346 EDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECKYTIQDD--GHSDWVSCVRSH 513
E H + V AF IVS + D+ +KLW + E K D GH + VS V H
Sbjct: 201 EGHDRGVNWAAFHPTLPLIVSGADDRQVKLWR-MNETKAWEVDTLRGHMNNVSSVMFH 257
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 43.2 bits (97), Expect = 1e-04
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1
Query: 280 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECK 459
+G D T L+D +G+ H+K V S+ F D ++++S DKT+++W +
Sbjct: 239 TGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGN 298
Query: 460 YTIQD--DGHSDWVSCVRSH 513
YT + HS V V H
Sbjct: 299 YTSRHTLKDHSAEVRAVTVH 318
Score = 37.1 bits (82), Expect = 0.008
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAA-GKTTRR--FEDHTKDVLSVAFSVDNRQIVSSSRDKT 426
D + L+ S DKT+R+W + G T R +DH+ +V +V N+ VS+S D T
Sbjct: 275 DTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVTVHATNKYFVSASLDST 332
Score = 31.1 bits (67), Expect = 0.51
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +2
Query: 59 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN 193
++ TL GH+ VT I D++L++S DKT+ +W + D N
Sbjct: 255 QILSTLTGHSKKVTSIKFVGD-TDLVLTASSDKTVRIWGCSEDGN 298
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 42.7 bits (96), Expect = 2e-04
Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 4/86 (4%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAG---KTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 426
S +G Y S S D+T +W+++A H K V+++ +S D+RQ+++ ++
Sbjct: 283 SHNGKYLASSSKDQTAIIWEISADGHISLKHTLVGHHKPVIAILWSPDDRQVLTCGAEEV 342
Query: 427 IKLWNT-LAECKYTIQDDGHSDWVSC 501
I+ W+ +C + + G S +SC
Sbjct: 343 IRRWDVDSGDCVHMYEKGGISP-ISC 367
Score = 35.9 bits (79), Expect = 0.018
Identities = 23/85 (27%), Positives = 40/85 (47%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 435
+ DG + +S D + L+D A T R + + S + S DN+ I+ + ++ I+L
Sbjct: 412 TDDGKWLVSVCKDSVISLFDREA--TVERLIEEEDMITSFSLSNDNKYILVNLLNQEIRL 469
Query: 436 WNTLAECKYTIQDDGHSDWVSCVRS 510
WN + K + GH +RS
Sbjct: 470 WNIEGDPKIVSRYKGHKRSRFIIRS 494
Score = 35.5 bits (78), Expect = 0.024
Identities = 18/72 (25%), Positives = 37/72 (51%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
DG ++G D+++ +WDL + T+ V +A + D + +VS +D I L++
Sbjct: 372 DGQGIIAGMTDRSICMWDLDGREKECWKGQRTQKVSDIAMTDDGKWLVSVCKDSVISLFD 431
Query: 442 TLAECKYTIQDD 477
A + I+++
Sbjct: 432 REATVERLIEEE 443
Score = 33.9 bits (74), Expect = 0.073
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 271 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN-RQIVSSSRDKTIKLW 438
+ SGS D + +W + GK H V V++S N + S+S D TI++W
Sbjct: 503 FIASGSEDSQVYIWHRSTGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIW 559
Score = 33.1 bits (72), Expect = 0.13
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = +1
Query: 328 KTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAE 453
+T + E HT +V + FS + + + SSS+D+T +W A+
Sbjct: 265 QTAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISAD 306
Score = 31.1 bits (67), Expect = 0.51
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +2
Query: 92 WVTQIATNPKYPDMILSSSRDKTLIVWKLTRD 187
W Q + N KY + SSS+D+T I+W+++ D
Sbjct: 278 WFLQFSHNGKY---LASSSKDQTAIIWEISAD 306
Score = 30.3 bits (65), Expect = 0.89
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +2
Query: 53 TLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 184
T KL L GH G V ++ +P M+ S+S D T+ +W L R
Sbjct: 520 TGKLIVELPGHAGAVNCVSWSPTNLHMLASASDDGTIRIWGLDR 563
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 42.7 bits (96), Expect = 2e-04
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +1
Query: 259 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSSSRDKTIKL 435
S LS S DKT+RLWD+ KT + H V + FS VD +S S D I++
Sbjct: 515 SKSQLLLSSSMDKTVRLWDIET-KTCLKLFAHNDYVTCIQFSPVDENYFLSGSLDAKIRI 573
Query: 436 WN 441
W+
Sbjct: 574 WS 575
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/56 (32%), Positives = 37/56 (66%)
Frame = +1
Query: 352 HTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRSHPI 519
H +L +++S ++ ++SSS DKT++LW+ E K ++ H+D+V+C++ P+
Sbjct: 505 HLDAILDLSWS-KSQLLLSSSMDKTVRLWDI--ETKTCLKLFAHNDYVTCIQFSPV 557
Score = 29.1 bits (62), Expect = 2.1
Identities = 17/66 (25%), Positives = 32/66 (48%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
D NY LSGS D +R+W + + + D + V + ++ D + + S + ++
Sbjct: 558 DENYFLSGSLDAKIRIWSI-QDRHVVEWSDLHEMVTAACYTPDGQGALIGSHKGICRAYD 616
Query: 442 TLAECK 459
T +CK
Sbjct: 617 T-EDCK 621
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 42.3 bits (95), Expect = 2e-04
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Frame = +1
Query: 253 ASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF------SVDNRQIVSSS 414
AS DG +GS D+T+RLWDL + +H V SVAF V ++ S S
Sbjct: 251 ASPDGGAIATGSSDRTVRLWDLKMRAAIQTMSNHNDQVWSVAFRPPGGTGVRAGRLASVS 310
Query: 415 RDKTIKLWN 441
DK++ L++
Sbjct: 311 DDKSVSLYD 319
Score = 38.3 bits (85), Expect = 0.003
Identities = 31/87 (35%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 438
D SGS D + + D A GKT HT VLSV S D I + S D+T++LW
Sbjct: 212 DPRVLFSGSDDGHVNMHD-AEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLW 270
Query: 439 NTLAECKYTIQD-DGHSDWVSCVRSHP 516
+ + + IQ H+D V V P
Sbjct: 271 D--LKMRAAIQTMSNHNDQVWSVAFRP 295
Score = 30.3 bits (65), Expect = 0.89
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 47 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 178
+E L G++ GH WV + +P I + S D+T+ +W L
Sbjct: 230 AEGKTLLGSMSGHTSWVLSVDASPD-GGAIATGSSDRTVRLWDL 272
Score = 27.5 bits (58), Expect = 6.3
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 400 IVSSSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRSHP 516
+++ S D+T+KLW E + GHS V+ + +HP
Sbjct: 33 LLTGSLDETVKLWRP-DELDLVRTNTGHSLGVAALAAHP 70
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 42.3 bits (95), Expect = 2e-04
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Frame = +1
Query: 250 CASSD--GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDK 423
CA D G Y ++GS D+ +++W + H D+ +A S +N + S+S D
Sbjct: 310 CAIFDRSGRYVITGSDDRLVKIWSMETALCLASCRGHEGDITDLAVSSNNALVASASNDF 369
Query: 424 TIKLW 438
I++W
Sbjct: 370 VIRVW 374
Score = 36.3 bits (80), Expect = 0.014
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS---VDNRQIVSSSRDKT 426
SS+ S S D +R+W L G HT V ++AFS Q++SSS D T
Sbjct: 356 SSNNALVASASNDFVIRVWRLPDGMPISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGT 415
Query: 427 IKLWN 441
++W+
Sbjct: 416 CRIWD 420
Score = 32.7 bits (71), Expect = 0.17
Identities = 17/35 (48%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +2
Query: 74 LRGHNGWVTQIATNPKYPDM--ILSSSRDKTLIVW 172
LRGH G VT IA +P+ + +LSSS D T +W
Sbjct: 385 LRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIW 419
Score = 29.5 bits (63), Expect = 1.6
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = +1
Query: 325 GKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECKYTIQDDGHSDWVSCV 504
G +RF + V + +S+DNR ++++ D I +WN A+ GHS+ +
Sbjct: 587 GGPRQRFLPTPRGVNMIIWSLDNRFVLAAIMDCRICVWNA-ADGSLVHCLTGHSESSYVL 645
Query: 505 RSHPIMP 525
HP P
Sbjct: 646 DVHPFNP 652
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 42.3 bits (95), Expect = 2e-04
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +1
Query: 277 LSGSWDKTLRLWDLAAGKTTRRFED---HTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
+SG D +R+WD GK ++ ++ H + + S+ + D+ ++ S DKT KLW+
Sbjct: 191 VSGGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWD 248
Score = 33.5 bits (73), Expect = 0.096
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Frame = +1
Query: 247 CC-ASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV 405
CC S D + ++GS D+T +LWD+ +GK F+ SV FSV + V
Sbjct: 84 CCDISRDSSRLITGSADQTAKLWDVKSGKELFTFK-FGAPARSVDFSVGDHLAV 136
Score = 32.7 bits (71), Expect = 0.17
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
+G+ S + D T +W G+ + H+ V S D+ ++++ S D+T KLW+
Sbjct: 48 NGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDSSRLITGSADQTAKLWD 107
Score = 31.9 bits (69), Expect = 0.29
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +1
Query: 250 CASSDGNYALSGSWDKTLRLWDL 318
C ++D ++ L+GS DKT +LWD+
Sbjct: 227 CKAADDSHFLTGSHDKTAKLWDM 249
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 42.3 bits (95), Expect = 2e-04
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Frame = +1
Query: 247 CCASSDGNYALSGSWDKTLRLWDLAAGK--TTRRFEDHTKDVLSVAFSVDNRQIVSSSRD 420
C S G + S+D T +W + E H +V SV+++ + + SRD
Sbjct: 80 CAWSPSGQLLATASFDGTTGIWKNYGSEFECISTLEGHENEVKSVSWNASGSCLATCSRD 139
Query: 421 KTIKLWNTLAECKYTIQD--DGHSDWVSCVRSHPIM 522
K++ +W L +Y GH+ V V+ HP M
Sbjct: 140 KSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTM 175
Score = 33.5 bits (73), Expect = 0.096
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Frame = +1
Query: 280 SGSWDKTLRLWD---LAAGKTTRRF--EDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNT 444
S S D T+R+W+ L+ T + E HT+ V S A+S + + ++S D T +W
Sbjct: 44 SCSGDNTVRIWEQSSLSRSWTCKTVLEETHTRTVRSCAWSPSGQLLATASFDGTTGIWKN 103
Query: 445 LA---ECKYTIQDDGHSDWVSCV 504
EC T+ +GH + V V
Sbjct: 104 YGSEFECISTL--EGHENEVKSV 124
Score = 30.3 bits (65), Expect = 0.89
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKT---TRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 426
++ G+ + S DK++ +W++ G HT+DV V + + S S D T
Sbjct: 127 NASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVLFSCSYDNT 186
Query: 427 IKLW 438
IK+W
Sbjct: 187 IKVW 190
Score = 29.5 bits (63), Expect = 1.6
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +1
Query: 352 HTKDVLSVAFSVDNRQIVSSSRDKTIKLWNT 444
H+ V S++F+ ++V+ S D T+K+W T
Sbjct: 212 HSSTVWSISFNAAGDKMVTCSDDLTLKIWGT 242
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 41.9 bits (94), Expect = 3e-04
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +1
Query: 268 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSSSRDKTIKLWNT 444
N+ S ++ + +WD+ ++ +E+H K SV FS + +VS S D +K+W T
Sbjct: 434 NHIASSDYEGIVTVWDVTTRQSLMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCT 493
Query: 445 LAECKYTIQDDGHSDWVSCVRSHP 516
E I D ++ + CV+ +P
Sbjct: 494 RQEAS-VINIDMKAN-ICCVKYNP 515
Score = 35.9 bits (79), Expect = 0.018
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +1
Query: 268 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
N S S D TLRLWD+ R F HT + V +V++ + S + +++
Sbjct: 561 NELASASTDSTLRLWDVKDNLPVRTFRGHTNEKNFVGLTVNSEYLACGSETNEVYVYH 618
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 41.5 bits (93), Expect = 4e-04
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 271 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 450
Y+ WD +LRL L K R F+ H V+S++ +S S D+T+ LW+
Sbjct: 92 YSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRV 151
Query: 451 E-CKYTIQDDG 480
E C+ ++ G
Sbjct: 152 EKCQGLLRVQG 162
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 41.5 bits (93), Expect = 4e-04
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 271 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 450
Y+ WD +LRL L K R F+ H V+S++ +S S D+T+ LW+
Sbjct: 89 YSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRV 148
Query: 451 E-CKYTIQDDG 480
E C+ ++ G
Sbjct: 149 EKCQGLLRVQG 159
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 41.5 bits (93), Expect = 4e-04
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +1
Query: 259 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSSSRDKTIKL 435
S+ + LS S D+T+RLW + + R H V VAF+ VD+ +S S D +++
Sbjct: 372 SEKGFLLSSSVDETVRLWRVGSSDECIRVFSHKSFVTCVAFNPVDDNYFISGSIDGKVRI 431
Query: 436 WN 441
W+
Sbjct: 432 WD 433
Score = 30.7 bits (66), Expect = 0.68
Identities = 16/61 (26%), Positives = 31/61 (50%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
D NY +SGS D +R+WD++ + + D + V ++ + D + V S + ++
Sbjct: 416 DDNYFISGSIDGKVRIWDVSQFRVV-DYTDIRQIVTALCYRPDGKGAVVGSMTGECRFYH 474
Query: 442 T 444
T
Sbjct: 475 T 475
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 41.1 bits (92), Expect = 5e-04
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +1
Query: 250 CASSD--GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDK 423
CA D G Y ++GS D+ +++W + H D+ +A S +N I S+S D
Sbjct: 250 CAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSNNIFIASASNDC 309
Query: 424 TIKLWNTLAECKYTIQDDGHSDWVSCVRSHPIMPTP 531
I++W ++ GH+ V+ + P +P
Sbjct: 310 VIRVWRLPDGLPVSVL-RGHTGAVTAIAFSPRPGSP 344
Score = 36.7 bits (81), Expect = 0.010
Identities = 22/65 (33%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV---DNRQIVSSSRDKT 426
SS+ + S S D +R+W L G HT V ++AFS Q++SSS D T
Sbjct: 296 SSNNIFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDGT 355
Query: 427 IKLWN 441
++W+
Sbjct: 356 CRIWD 360
Score = 33.9 bits (74), Expect = 0.073
Identities = 18/35 (51%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = +2
Query: 74 LRGHNGWVTQIATNPK--YPDMILSSSRDKTLIVW 172
LRGH G VT IA +P+ P +LSSS D T +W
Sbjct: 325 LRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIW 359
Score = 27.1 bits (57), Expect = 8.3
Identities = 17/67 (25%), Positives = 31/67 (46%)
Frame = +1
Query: 325 GKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECKYTIQDDGHSDWVSCV 504
G +R + V +A+S+DNR ++++ D I +WN ++ GH+ +
Sbjct: 534 GGPRQRILPTPRGVNMIAWSLDNRFVLAAIMDCRICVWNA-SDGSLVHSLTGHTASTYVM 592
Query: 505 RSHPIMP 525
HP P
Sbjct: 593 DVHPFNP 599
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 41.1 bits (92), Expect = 5e-04
Identities = 21/63 (33%), Positives = 33/63 (52%)
Frame = +1
Query: 250 CASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 429
C + SGSWDKTL++W L+ K + H D ++ + D R + S+S D +
Sbjct: 179 CLAVHAGIIYSGSWDKTLKVWRLSDLKCLESIKAH-DDAINGLVAGDGR-VYSASADGKV 236
Query: 430 KLW 438
K+W
Sbjct: 237 KIW 239
Score = 31.1 bits (67), Expect = 0.51
Identities = 27/97 (27%), Positives = 39/97 (40%), Gaps = 10/97 (10%)
Frame = +1
Query: 256 SSDGNYALSGS-------WDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSS 414
S DGN+ G W+K + D + H VL + V + S S
Sbjct: 278 SGDGNWVYGGGSDGFVIGWEKKEKEGDFEEWRLGFETRGHNMAVLCMC--VVGEMVCSGS 335
Query: 415 RDKTIKLWN---TLAECKYTIQDDGHSDWVSCVRSHP 516
DK+I LW T CK+ + GH V C+++ P
Sbjct: 336 ADKSIGLWRREVTGMLCKFGV-IHGHEGPVKCLQASP 371
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 41.1 bits (92), Expect = 5e-04
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 435
+SDG G D +++L KT H V +A S DN +V+ SRD T+ L
Sbjct: 2635 TSDGEIITGGHADNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTGSRDSTVLL 2694
Query: 436 W 438
W
Sbjct: 2695 W 2695
Score = 28.3 bits (60), Expect = 3.6
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2
Query: 47 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 178
S+ K T GH VT +A +P + +++ SRD T+++W++
Sbjct: 2655 SDGAKTLETAFGHCAPVTCLALSPDN-NFLVTGSRDSTVLLWRI 2697
Score = 27.5 bits (58), Expect = 6.3
Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +1
Query: 247 CCA-SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDK 423
C A S D N+ ++GS D T+ LW + T+R S N + ++ +K
Sbjct: 2673 CLALSPDNNFLVTGSRDSTVLLWRIHKAFTSRTSVSEPSTGSGAPSSTSNTNLANTLANK 2732
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 40.7 bits (91), Expect = 6e-04
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +1
Query: 247 CCASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN-RQIVSSSRDK 423
C D ++ SGS D + +W+L K H+ V V+++ N R + S+S D+
Sbjct: 449 CFGGLDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDDQ 508
Query: 424 TIKLW 438
TI++W
Sbjct: 509 TIRIW 513
Score = 34.3 bits (75), Expect = 0.055
Identities = 14/33 (42%), Positives = 22/33 (66%)
Frame = +2
Query: 74 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 172
L GH+ V ++ NPK P M+ S+S D+T+ +W
Sbjct: 481 LSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
Score = 30.3 bits (65), Expect = 0.89
Identities = 16/65 (24%), Positives = 30/65 (46%), Gaps = 3/65 (4%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTR---RFEDHTKDVLSVAFSVDNRQIVSSSRDKT 426
S+ G Y + S D T +W + E H V V++S D+ ++++ +
Sbjct: 233 SNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSFVSWSPDDTKLLTCGNAEV 292
Query: 427 IKLWN 441
+KLW+
Sbjct: 293 LKLWD 297
Score = 28.7 bits (61), Expect = 2.7
Identities = 19/83 (22%), Positives = 36/83 (43%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
DG ++ DK +R+ +L R + + S++ S D + + + + I LW+
Sbjct: 368 DGESMITVFSDKEIRILNLET--KVERVISEEQPITSLSISGDGKFFIVNLSCQEIHLWD 425
Query: 442 TLAECKYTIQDDGHSDWVSCVRS 510
E K ++ GH +RS
Sbjct: 426 LAGEWKQPLKFSGHRQSKYVIRS 448
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 40.7 bits (91), Expect = 6e-04
Identities = 23/63 (36%), Positives = 33/63 (52%)
Frame = +1
Query: 250 CASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 429
C G SGS DKT+++WDL + + H V S+ ++ ++SSS D TI
Sbjct: 317 CFVVGGEVLYSGSVDKTIKVWDLNTLQCRMTLKQHIGTVTSLL--CWDKCLISSSLDGTI 374
Query: 430 KLW 438
KLW
Sbjct: 375 KLW 377
Score = 27.9 bits (59), Expect = 4.8
Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Frame = +1
Query: 379 FSVDNRQIVSSSRDKTIKLW--NTLAECKYTIQ 471
F V + S S DKTIK+W NTL +C+ T++
Sbjct: 318 FVVGGEVLYSGSVDKTIKVWDLNTL-QCRMTLK 349
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 40.7 bits (91), Expect = 6e-04
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Frame = +1
Query: 214 AFIRSFALHF*CCASS-----DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVA 378
A +R+F H C + G+ S S D TLR+WD+ +T H ++LS
Sbjct: 140 ASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIPAHDFEILSCD 199
Query: 379 FS-VDNRQIVSSSRDKTIKLWN 441
++ D+ + +SS DKT+K+W+
Sbjct: 200 WNKYDDCILATSSVDKTVKVWD 221
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +1
Query: 277 LSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI-VSSSRDKTIKLWN 441
L+ SWD T++LW + + R F++H V ++ + + S+S D T+++W+
Sbjct: 123 LTSSWDDTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWD 178
Score = 34.3 bits (75), Expect = 0.055
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = +1
Query: 280 SGSWDKTLRLWDLAAGKTTRR-FEDHTKDVLSVAFSVDNRQIVSS-SRDKTIKLWNTLAE 453
+ S DKT+++WD+ + + H V V FS R +++S S D ++ LW+ + E
Sbjct: 210 TSSVDKTVKVWDVRSYRVPLAVLNGHGYAVRKVKFSPHRRSLIASCSYDMSVCLWDYMVE 269
Query: 454 CKYTIQDDGHSDW 492
+ D H+++
Sbjct: 270 DALVGRYDHHTEF 282
Score = 31.1 bits (67), Expect = 0.51
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 71 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIP 208
T + H V Q NPK+ D+ S+S D TL +W + + IP
Sbjct: 144 TFKEHAYCVYQAVWNPKHGDVFASASGDCTLRIWDVREPGSTMIIP 189
>At3g50390.1 68416.m05512 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to myosin heavy chain kinase B (gb:U90946)
[Dictyostelium discoideum]
Length = 469
Score = 40.3 bits (90), Expect = 8e-04
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +1
Query: 247 CCA-SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDK 423
C A S D SGSWDKT ++W ++ + H +D ++ S + + + S D
Sbjct: 216 CLALSEDKRLLYSGSWDKTFKVWRVSDLRCVESVNAH-EDAVNAVVSGFDGLVFTGSADG 274
Query: 424 TIKLWNTLAECKYT 465
T+K+W + K T
Sbjct: 275 TVKVWRREDQAKDT 288
Score = 31.1 bits (67), Expect = 0.51
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +1
Query: 352 HTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRS 510
H + +A S D R + S S DKT K+W +++ + + H D V+ V S
Sbjct: 210 HLDAISCLALSEDKRLLYSGSWDKTFKVWR-VSDLRCVESVNAHEDAVNAVVS 261
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 40.3 bits (90), Expect = 8e-04
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 435
S DG+ S SWD++ ++W + K E D ++ + + + S DK IK+
Sbjct: 201 SQDGSLLYSASWDRSFKIWRTSDFKCLDSIEKAHDDAINAIVVSKDGFVYTGSADKKIKV 260
Query: 436 WN 441
WN
Sbjct: 261 WN 262
Score = 34.7 bits (76), Expect = 0.042
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 13/77 (16%)
Frame = +1
Query: 250 CASSDGNYALSGSWDKTLRLW-----DLAAGKTTRRFEDHTKDVLSVAFSVDNR------ 396
C + + LSGS DK+LR+W + E HTK V S+A SV +
Sbjct: 333 CLAVASDLVLSGSADKSLRVWRRGLMEKEGYSCLAVLEGHTKPVKSLAVSVSDSDSNSDY 392
Query: 397 --QIVSSSRDKTIKLWN 441
+ S S D ++K+WN
Sbjct: 393 SCMVYSGSLDLSLKVWN 409
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +2
Query: 68 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 175
G LRGH + +A D++LS S DK+L VW+
Sbjct: 322 GALRGHRKAIMCLAVAS---DLVLSGSADKSLRVWR 354
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 8/69 (11%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWD-LAAG-------KTTRRFEDHTKDVLSVAFSVDNRQIVSS 411
S DG SG+ D+++ +W+ L G H K ++ +A + D ++S
Sbjct: 287 SEDGKVLYSGACDRSILVWERLINGDDEELHMSVVGALRGHRKAIMCLAVASD--LVLSG 344
Query: 412 SRDKTIKLW 438
S DK++++W
Sbjct: 345 SADKSLRVW 353
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 39.9 bits (89), Expect = 0.001
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWD--LAAGKTTR----RFEDHTKDVLSVAFSVDNRQIVSSS- 414
S GN SG D + +WD LA+ K TR RFE+HT V ++A+ ++++
Sbjct: 261 SESGNKQASGGNDNVVHIWDRSLASSKQTRQWLHRFEEHTAAVRALAWCPFQASLLATGG 320
Query: 415 --RDKTIKLWNT 444
D IK WNT
Sbjct: 321 GVGDGKIKFWNT 332
Score = 33.1 bits (72), Expect = 0.13
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +1
Query: 283 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAE 453
G L LW + HT VL +A S + + S++ D+ ++LWN E
Sbjct: 364 GFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFGE 420
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +1
Query: 337 RRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRSH 513
++ H+KDV FS +N+ I SSS DKTI++W + C I G S C+R H
Sbjct: 210 KQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIRVIY--GISPQY-CIRFH 266
Query: 514 PI 519
P+
Sbjct: 267 PV 268
Score = 32.7 bits (71), Expect = 0.17
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 435
SS+ Y S S DKT+R+W+L+ G R + V+N + + + +K + +
Sbjct: 225 SSNNQYIASSSLDKTIRVWELSRGVCIRVIYGISPQYCIRFHPVNNNFLSAGNANKELTV 284
Query: 436 WN 441
+N
Sbjct: 285 FN 286
Score = 28.7 bits (61), Expect = 2.7
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +2
Query: 74 LRGHNGWVTQI--ATNPKYPDMILSSSRDKTLIVWKLTR 184
L GH+ VT ++N +Y I SSS DKT+ VW+L+R
Sbjct: 212 LTGHSKDVTDFDFSSNNQY---IASSSLDKTIRVWELSR 247
Score = 27.9 bits (59), Expect = 4.8
Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +1
Query: 265 GNYALSGSWDKTLRLWDLAAGKTT--RRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 438
G Y ++GS D + +DL K T + + H V+ VA++ + SS + +W
Sbjct: 416 GEYIVAGSEDSNVYFYDLTKPKHTCVNKLQGHRFPVMCVAWNHGENLLASSDFYGVVIVW 475
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 39.5 bits (88), Expect = 0.001
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
Frame = +1
Query: 247 CCA-SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDK 423
C A DG SG DK ++W L +G H + ++A+ + + S DK
Sbjct: 77 CSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDK 136
Query: 424 TIKLWNTLAECKYTIQDDGHSDWVSCVRSHPIM 522
T+K W+T + Q + V+ HP+M
Sbjct: 137 TLKYWDTRQQNPVHTQQLPDKCYTLSVK-HPLM 168
Score = 30.7 bits (66), Expect = 0.68
Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
Frame = +1
Query: 286 SWDKTLRLWDL-----AAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 450
SWD +R W++ + + H + VL A+ D + S DK K+W L+
Sbjct: 44 SWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLS 103
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 39.5 bits (88), Expect = 0.001
Identities = 21/62 (33%), Positives = 34/62 (54%)
Frame = +1
Query: 253 ASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 432
A SDG + S SWDKTL++W + + + H V ++A S N + + S D+ I+
Sbjct: 202 AVSDG-FIYSVSWDKTLKIWRASDLRCKESIKAHDDAVNAIAVST-NGTVYTGSADRRIR 259
Query: 433 LW 438
+W
Sbjct: 260 VW 261
Score = 35.1 bits (77), Expect = 0.031
Identities = 23/83 (27%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLW---DLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSSSRDK 423
+ DG+ SGS D+++ +W D + R H K +LS+ F+V + ++S S D+
Sbjct: 289 NDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSL-FNVSD-LLLSGSADR 346
Query: 424 TIKLWNTLAECKYTIQD--DGHS 486
T+++W + Y+ + GH+
Sbjct: 347 TVRIWRRGPDSSYSCLEVLSGHT 369
Score = 31.5 bits (68), Expect = 0.39
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +2
Query: 47 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDEN 193
S + +RG LRGH+ + + D++LS S D+T+ +W+ D +
Sbjct: 313 SNYMAVRGALRGHDKAILSLFN---VSDLLLSGSADRTVRIWRRGPDSS 358
Score = 29.9 bits (64), Expect = 1.2
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Frame = +1
Query: 253 ASSDGNYALSGSWDKTLRLWDLAAGKTTRRF----EDHTKDVLSVAFSVDNRQIVSSSRD 420
A S +GS D+ +R+W G+ E H V ++A + D + S S D
Sbjct: 242 AVSTNGTVYTGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALNDDGSVLFSGSCD 301
Query: 421 KTIKLW 438
++I +W
Sbjct: 302 RSILVW 307
Score = 27.1 bits (57), Expect = 8.3
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 376 AFSVDNRQIVSSSRDKTIKLWNTL-AECKYTIQDDGHSDWVSCV 504
A +V + I S S DKT+K+W CK +I+ H D V+ +
Sbjct: 200 ALAVSDGFIYSVSWDKTLKIWRASDLRCKESIK--AHDDAVNAI 241
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/59 (28%), Positives = 29/59 (49%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 438
DG A + WD +R+++ G + H +V++S D + S+S D T+ LW
Sbjct: 319 DGKIAATAGWDHRIRVYNYRKGNALAILKYHRATCNAVSYSPDCELMASASEDATVALW 377
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 39.1 bits (87), Expect = 0.002
Identities = 21/57 (36%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 268 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSSSRDKTIKL 435
N S S DK +++WD+A G E HTK+V +VA++ ++S S D+T+ L
Sbjct: 247 NILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVL 303
Score = 34.7 bits (76), Expect = 0.042
Identities = 12/40 (30%), Positives = 26/40 (65%)
Frame = +2
Query: 71 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 190
T+ GH+ T ++ N P+++ + S+D+T+ +W L+ +E
Sbjct: 364 TINGHDEAATSVSYNISAPNLLATGSKDRTVKLWDLSNNE 403
Score = 33.9 bits (74), Expect = 0.073
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Frame = +1
Query: 268 NYALSGSWDKTLRLWDLAAGKTT--RRFEDHTKDVLSVAFSVDNRQIVSSSRDK-TIKLW 438
N +GS D+T++LWDL+ + + + + +AFS DN +++ +KLW
Sbjct: 383 NLLATGSKDRTVKLWDLSNNEPSCIATHNPNAGGLFFIAFSPDNPFLLAMGGVMGELKLW 442
Query: 439 NTLAE 453
+TL++
Sbjct: 443 DTLSD 447
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 39.1 bits (87), Expect = 0.002
Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 2/84 (2%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWD--LAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 435
D + +SGS D +++WD L + + HT V A S D +IVS S D ++ +
Sbjct: 866 DAGFFISGSTDCLVKIWDPSLRGSELRATLKGHTGTVR--AISSDRGKIVSGSDDLSVIV 923
Query: 436 WNTLAECKYTIQDDGHSDWVSCVR 507
W+ + + GH VSCV+
Sbjct: 924 WDK-QTTQLLEELKGHDSQVSCVK 946
Score = 35.9 bits (79), Expect = 0.018
Identities = 18/61 (29%), Positives = 32/61 (52%)
Frame = +1
Query: 259 SDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 438
S G A +G D +WD+ +GK + + HTK + S+ D +++ S D T ++W
Sbjct: 991 STGILAAAGR-DTVANIWDIRSGKQMHKLKGHTKWIRSIRMVEDT--LITGSDDWTARVW 1047
Query: 439 N 441
+
Sbjct: 1048 S 1048
Score = 35.1 bits (77), Expect = 0.031
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 435
SSD +SGS D ++ +WD + + H V V + ++++++ D T+K+
Sbjct: 906 SSDRGKIVSGSDDLSVIVWDKQTTQLLEELKGHDSQVSCVKM-LSGERVLTAAHDGTVKM 964
Query: 436 WNTLAE-CKYTI 468
W+ + C T+
Sbjct: 965 WDVRTDMCVATV 976
Score = 30.3 bits (65), Expect = 0.89
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +2
Query: 59 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 172
+LR TL+GH G V I+++ I+S S D ++IVW
Sbjct: 890 ELRATLKGHTGTVRAISSD---RGKIVSGSDDLSVIVW 924
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 38.3 bits (85), Expect = 0.003
Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 7/93 (7%)
Frame = +1
Query: 268 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSS-------RDKT 426
N LSG +LRLWD+ A K + +L V F +Q +SSS +
Sbjct: 260 NVFLSGGSKGSLRLWDIRANKFVHEYVRDLGPILDVEFIAGGKQFISSSDVSGRNISENA 319
Query: 427 IKLWNTLAECKYTIQDDGHSDWVSCVRSHPIMP 525
+ +W+ E + Q + C++ HP P
Sbjct: 320 VIVWDISREVPLSNQVYVEAYTCPCIKRHPQDP 352
>At4g34380.1 68417.m04884 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Myosin heavy chain kinase B (MHCK
B).(SP:P90648) [Dictyostelium discoideum]
Length = 495
Score = 38.3 bits (85), Expect = 0.003
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +1
Query: 280 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECK 459
S SWD T+++W +A K H + SV D+ + + S D T+K+W + K
Sbjct: 252 SSSWDTTIKVWRIADSKCLESIHAHDDAINSVMSGFDD-LVFTGSADGTVKVWKRELQGK 310
Query: 460 YT 465
T
Sbjct: 311 GT 312
Score = 30.3 bits (65), Expect = 0.89
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +1
Query: 352 HTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRS 510
H V S++ V+ + SSS D TIK+W +A+ K H D ++ V S
Sbjct: 234 HNDAVSSLSLDVELGLLYSSSWDTTIKVWR-IADSKCLESIHAHDDAINSVMS 285
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 38.3 bits (85), Expect = 0.003
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +1
Query: 268 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSSSRDKTI 429
N S S DK +++WD+A G E HTK+V +VA++ ++S S D+T+
Sbjct: 279 NILASASADKKVKVWDVATGTCKITMEHHTKEVQAVAWNHYAPEVLLSGSFDQTV 333
Score = 37.5 bits (83), Expect = 0.006
Identities = 20/68 (29%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = +1
Query: 259 SDGNYALSGSWDKTLRLWDLAAGKTT--RRFEDHTKDVLSVAFSVDNRQIVSSSRDK-TI 429
S N +GS DK+++LWDL+ + + + + V S++F+VDN +++ K +
Sbjct: 415 STPNLLATGSMDKSVKLWDLSNNEPSCIATHQPNAGAVFSISFAVDNPFLLAIGGSKGEL 474
Query: 430 KLWNTLAE 453
+W+TL +
Sbjct: 475 HVWDTLLD 482
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 38.3 bits (85), Expect = 0.003
Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 1/110 (0%)
Frame = +1
Query: 115 SEIPGHDLIFLSRQNSHRVEADQRRKQLRYTSKAFIRSFALHF*CCASSDGNYALSGSWD 294
S+ GH +F S A + + + +I + F + L+ S D
Sbjct: 90 SDEDGHVSLFNSSSKKFASSATHQENTEKARFRDWIAHYNAIFDISWIKGDSCLLTASGD 149
Query: 295 KTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQ-IVSSSRDKTIKLWN 441
+T+++WD+ K T HT V S+ N +VS SRD LW+
Sbjct: 150 QTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWD 199
Score = 35.9 bits (79), Expect = 0.018
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +2
Query: 50 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 178
E K G L GH G V + ++P D+++S SRD +W L
Sbjct: 158 EENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWDL 200
Score = 34.3 bits (75), Expect = 0.055
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDN-RQIVSSSRDKTI 429
S DG Y LSGS D +W + + + H +V +V +S ++ ++S D T+
Sbjct: 347 SPDGEYVLSGSSDGNAYIWQVNKPQVDPIILKGHDFEVTAVDWSPSEIGKVATASDDFTV 406
Query: 430 KLWN 441
+LWN
Sbjct: 407 RLWN 410
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 37.9 bits (84), Expect = 0.004
Identities = 19/57 (33%), Positives = 33/57 (57%)
Frame = +1
Query: 268 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 438
N SGS DKT+++W L + + DH+ V+S+ ++ ++S S D T+K+W
Sbjct: 285 NRLYSGSMDKTIKVWSLDNLQCIQTLTDHSSVVMSLI--CWDQFLLSCSLDNTVKIW 339
Score = 29.1 bits (62), Expect = 2.1
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +1
Query: 280 SGSWDKTLRLWDLAAGKTT 336
+GS D+TLR+WD A+G+ T
Sbjct: 168 TGSKDETLRVWDCASGQCT 186
Score = 27.9 bits (59), Expect = 4.8
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +2
Query: 50 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 172
E+ L L GH V+ IA P D + + S+D+TL VW
Sbjct: 139 ESFALLTQLDGHEKLVSGIAL-PSGSDKLYTGSKDETLRVW 178
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 WD-40
repeats domain (PF00400) (6 weak)
Length = 1120
Score = 37.9 bits (84), Expect = 0.004
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
D N G D T++++++ + + + H+K + +AFS +VSS D + +WN
Sbjct: 877 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 936
Query: 442 T 444
T
Sbjct: 937 T 937
Score = 35.5 bits (78), Expect = 0.024
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +1
Query: 292 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSSSRDKTIKLW 438
DKT+++WD A G FE H V S+ + + + I S++ D IK W
Sbjct: 485 DKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAW 535
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 WD-40
repeats domain (PF00400) (6 weak)
Length = 1120
Score = 37.9 bits (84), Expect = 0.004
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
D N G D T++++++ + + + H+K + +AFS +VSS D + +WN
Sbjct: 877 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 936
Query: 442 T 444
T
Sbjct: 937 T 937
Score = 35.5 bits (78), Expect = 0.024
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +1
Query: 292 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSSSRDKTIKLW 438
DKT+++WD A G FE H V S+ + + + I S++ D IK W
Sbjct: 485 DKTIKVWDAATGVKRYTFEGHEAPVYSICPHYKENIQFIFSTALDGKIKAW 535
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 37.9 bits (84), Expect = 0.004
Identities = 21/89 (23%), Positives = 36/89 (40%)
Frame = +1
Query: 250 CASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 429
C+ +D +G D LW + G H V +AFS D + + S D +
Sbjct: 78 CSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAFSYDGQLLASGGLDGVV 137
Query: 430 KLWNTLAECKYTIQDDGHSDWVSCVRSHP 516
++++ + + DG + VR HP
Sbjct: 138 QIFDASSGTLKCVL-DGPGAGIEWVRWHP 165
Score = 33.9 bits (74), Expect = 0.073
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQI---VSSSRDKT 426
+S+ + A+SGS D ++ + ++ GK HT V V FS + I + DK
Sbjct: 251 NSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKK 310
Query: 427 IKLWN 441
+ +W+
Sbjct: 311 LIIWD 315
Score = 31.9 bits (69), Expect = 0.29
Identities = 15/58 (25%), Positives = 28/58 (48%)
Frame = +1
Query: 271 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNT 444
Y +G + T+ +WD G + H V +++ S + IVS S D T +++ +
Sbjct: 342 YLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTARVFES 399
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 37.9 bits (84), Expect = 0.004
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +1
Query: 247 CCASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSSSRDK 423
C S + S +++ +++WD+A + ++H K V S+ + S D + S S D
Sbjct: 540 CWNSYIKSQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDG 599
Query: 424 TIKLWN 441
++KLW+
Sbjct: 600 SVKLWS 605
Score = 34.3 bits (75), Expect = 0.055
Identities = 26/69 (37%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Frame = +1
Query: 247 CCA---SSDGNYALSGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSSS 414
CC S G GS D + +DL K H K V V F VD+ +VSSS
Sbjct: 622 CCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRF-VDSSTLVSSS 680
Query: 415 RDKTIKLWN 441
D T+KLW+
Sbjct: 681 TDNTLKLWD 689
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 37.9 bits (84), Expect = 0.004
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Frame = +1
Query: 247 CCASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF-SVDNRQIVSSSRDK 423
C S + S +++ +++WD+A + ++H K V S+ + S D + S S D
Sbjct: 540 CWNSYIKSQVASSNFEGVVQVWDVARNQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDG 599
Query: 424 TIKLWN 441
++KLW+
Sbjct: 600 SVKLWS 605
Score = 34.3 bits (75), Expect = 0.055
Identities = 26/69 (37%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Frame = +1
Query: 247 CCA---SSDGNYALSGSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSSS 414
CC S G GS D + +DL K H K V V F VD+ +VSSS
Sbjct: 622 CCVQFPSETGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHHKTVSYVRF-VDSSTLVSSS 680
Query: 415 RDKTIKLWN 441
D T+KLW+
Sbjct: 681 TDNTLKLWD 689
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 37.9 bits (84), Expect = 0.004
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
D N G D T++++++ + + + H+K + +AFS +VSS D + +WN
Sbjct: 888 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 947
Query: 442 T 444
T
Sbjct: 948 T 948
Score = 36.7 bits (81), Expect = 0.010
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +1
Query: 292 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSSSRDKTIKLW 438
DKT+++WD A G FE H V SV + + + I S++ D IK W
Sbjct: 485 DKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAW 535
Score = 30.3 bits (65), Expect = 0.89
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Frame = +1
Query: 301 LRLWDLAAGKTTRR---FEDHTKDVLSVAFSVDNRQ--IVSSSRDKTIKLWNTLAECK-Y 462
++L+ G+ R+ + H V ++FS N+Q +++ DKTIK+W+ K +
Sbjct: 441 VQLYSYHGGEDMRQHLEIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRH 500
Query: 463 TIQDDGHSDWVSCVRSH 513
T +GH V V H
Sbjct: 501 TF--EGHEAPVYSVCPH 515
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 37.9 bits (84), Expect = 0.004
Identities = 17/61 (27%), Positives = 32/61 (52%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
D N G D T++++++ + + + H+K + +AFS +VSS D + +WN
Sbjct: 888 DNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLCVWN 947
Query: 442 T 444
T
Sbjct: 948 T 948
Score = 36.7 bits (81), Expect = 0.010
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +1
Query: 292 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA--FSVDNRQIVSSSRDKTIKLW 438
DKT+++WD A G FE H V SV + + + I S++ D IK W
Sbjct: 485 DKTIKVWDAATGVKRHTFEGHEAPVYSVCPHYKENIQFIFSTALDGKIKAW 535
Score = 30.3 bits (65), Expect = 0.89
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Frame = +1
Query: 301 LRLWDLAAGKTTRR---FEDHTKDVLSVAFSVDNRQ--IVSSSRDKTIKLWNTLAECK-Y 462
++L+ G+ R+ + H V ++FS N+Q +++ DKTIK+W+ K +
Sbjct: 441 VQLYSYHGGEDMRQHLEIDAHVGGVNDISFSTPNKQLCVITCGDDKTIKVWDAATGVKRH 500
Query: 463 TIQDDGHSDWVSCVRSH 513
T +GH V V H
Sbjct: 501 TF--EGHEAPVYSVCPH 515
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 37.5 bits (83), Expect = 0.006
Identities = 18/64 (28%), Positives = 39/64 (60%)
Frame = +1
Query: 328 KTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVR 507
K F H+ D+L +++S +NR ++S+S D +++LW C+ + H+++V+ V+
Sbjct: 347 KPLHEFLGHSGDILDISWSKNNR-LLSASVDNSVRLWQ--IGCEDCLGIFSHNNYVTSVQ 403
Query: 508 SHPI 519
+P+
Sbjct: 404 FNPV 407
Score = 29.5 bits (63), Expect = 1.6
Identities = 17/74 (22%), Positives = 34/74 (45%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
D ++ +SGS D +R+W + + + D V +V + D + ++ + + +N
Sbjct: 408 DDDHFISGSIDGKVRIWSASQCQVV-DWADARGIVTAVCYQPDGQAVIIGTLTSDCRFYN 466
Query: 442 TLAECKYTIQDDGH 483
C +Q DGH
Sbjct: 467 VSGHC---LQLDGH 477
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 83 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 184
HN +VT + NP D +S S D + +W ++
Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQ 428
Score = 27.5 bits (58), Expect = 6.3
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +1
Query: 367 LSVAFSVDNRQIVSSSRDKTIKLWN 441
+S +F+ D + IVS+ D ++ +WN
Sbjct: 539 ISASFTADGKHIVSACDDSSVYVWN 563
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 37.5 bits (83), Expect = 0.006
Identities = 18/64 (28%), Positives = 39/64 (60%)
Frame = +1
Query: 328 KTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVR 507
K F H+ D+L +++S +NR ++S+S D +++LW C+ + H+++V+ V+
Sbjct: 347 KPLHEFLGHSGDILDISWSKNNR-LLSASVDNSVRLWQ--IGCEDCLGIFSHNNYVTSVQ 403
Query: 508 SHPI 519
+P+
Sbjct: 404 FNPV 407
Score = 29.5 bits (63), Expect = 1.6
Identities = 17/74 (22%), Positives = 34/74 (45%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
D ++ +SGS D +R+W + + + D V +V + D + ++ + + +N
Sbjct: 408 DDDHFISGSIDGKVRIWSASQCQVV-DWADARGIVTAVCYQPDGQAVIIGTLTSDCRFYN 466
Query: 442 TLAECKYTIQDDGH 483
C +Q DGH
Sbjct: 467 VSGHC---LQLDGH 477
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 83 HNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 184
HN +VT + NP D +S S D + +W ++
Sbjct: 395 HNNYVTSVQFNPVDDDHFISGSIDGKVRIWSASQ 428
Score = 27.5 bits (58), Expect = 6.3
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +1
Query: 367 LSVAFSVDNRQIVSSSRDKTIKLWN 441
+S +F+ D + IVS+ D ++ +WN
Sbjct: 535 ISASFTADGKHIVSACDDSSVYVWN 559
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 37.1 bits (82), Expect = 0.008
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = +1
Query: 253 ASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS-VDNRQIVSSSRDKTI 429
A SD N LS S DKT+RLW + F H V V F+ V+ S S D
Sbjct: 279 AWSDSNLLLSASKDKTVRLWRTGCDQCLHVFH-HNNYVTCVEFNPVNKNNFASGSIDGKA 337
Query: 430 KLWNTLAE 453
++W E
Sbjct: 338 RIWGLSEE 345
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/39 (35%), Positives = 25/39 (64%)
Frame = +2
Query: 74 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 190
L GH G V +A + +++LS+S+DKT+ +W+ D+
Sbjct: 268 LYGHTGDVLDLAWSDS--NLLLSASKDKTVRLWRTGCDQ 304
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 36.7 bits (81), Expect = 0.010
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 435
S D Y +SGS D + +WD+ G + + H V VA+ + + S S D+T ++
Sbjct: 62 SPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRI 121
Query: 436 WNTLAECK 459
+ + K
Sbjct: 122 YANKPQTK 129
Score = 31.5 bits (68), Expect = 0.39
Identities = 18/64 (28%), Positives = 30/64 (46%)
Frame = +1
Query: 328 KTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVR 507
K + H KDVL + +S D+ ++S S D + +W+ + I D H +V V
Sbjct: 44 KVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQIL-DAHCHYVQGVA 102
Query: 508 SHPI 519
P+
Sbjct: 103 WDPL 106
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 36.7 bits (81), Expect = 0.010
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 435
S D Y +SGS D + +WD+ G + + H V VA+ + + S S D+T ++
Sbjct: 121 SPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRI 180
Query: 436 WNTLAECK 459
+ + K
Sbjct: 181 YANKPQTK 188
Score = 33.9 bits (74), Expect = 0.073
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT------KDVLSVAFSVDNRQIVSSSR 417
S G SG+ L +W L +T + ++ H KDVL + +S D+ ++S S
Sbjct: 73 SPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSV 132
Query: 418 DKTIKLWNTLAECKYTIQDDGHSDWVSCVRSHPI 519
D + +W+ + I D H +V V P+
Sbjct: 133 DNSCIIWDVNKGSVHQIL-DAHCHYVQGVAWDPL 165
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 36.7 bits (81), Expect = 0.010
Identities = 19/68 (27%), Positives = 33/68 (48%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 435
S D Y +SGS D + +WD+ G + + H V VA+ + + S S D+T ++
Sbjct: 121 SPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRI 180
Query: 436 WNTLAECK 459
+ + K
Sbjct: 181 YANKPQTK 188
Score = 33.9 bits (74), Expect = 0.073
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHT------KDVLSVAFSVDNRQIVSSSR 417
S G SG+ L +W L +T + ++ H KDVL + +S D+ ++S S
Sbjct: 73 SPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSV 132
Query: 418 DKTIKLWNTLAECKYTIQDDGHSDWVSCVRSHPI 519
D + +W+ + I D H +V V P+
Sbjct: 133 DNSCIIWDVNKGSVHQIL-DAHCHYVQGVAWDPL 165
>At5g21040.1 68418.m02503 F-box family protein / WD-40 repeat family
protein contains G-protein beta WD-40 repeats
Length = 539
Score = 36.7 bits (81), Expect = 0.010
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Frame = +1
Query: 280 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECK 459
SGSWD ++R+WD ++ K + H+ V +A + ++S+ + +W+ +E
Sbjct: 272 SGSWDMSVRIWDRSSMKCVKTLR-HSDWVWGLA---PHETTLASTSGSDVYIWDVSSETP 327
Query: 460 YTIQDDGHSDWV-SCVRSH 513
I D H S RSH
Sbjct: 328 LAIIPDAHEGTTYSLARSH 346
>At4g38480.1 68417.m05438 transducin family protein / WD-40 repeat
family protein contains contains Pfam PF00400: WD
domain, G-beta repeat (7 copies, 3 weak);similar to gene
PC326 protein - mouse, PIR2:S37694
Length = 471
Score = 36.7 bits (81), Expect = 0.010
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFED-HTKDVLSVAFS--VDNRQIVSSSRDKT 426
++DG+ LSGS D+ + LWD F+ H ++ F D+R IV+S+ DK
Sbjct: 64 NADGDILLSGSDDRQVILWDWQTASVKLSFDSGHFNNIFQAKFMPFSDDRTIVTSAADKQ 123
Query: 427 IK 432
++
Sbjct: 124 VR 125
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 36.3 bits (80), Expect = 0.014
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = +1
Query: 283 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAE 453
G L LW + HT VL +A S D + S++ D+T++LWN E
Sbjct: 348 GFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGE 404
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 36.3 bits (80), Expect = 0.014
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = +1
Query: 283 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAE 453
G L LW + HT VL +A S D + S++ D+T++LWN E
Sbjct: 331 GFTQNQLTLWKYPSMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGE 387
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 36.3 bits (80), Expect = 0.014
Identities = 27/69 (39%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
Frame = +1
Query: 247 CCAS--SDGNYALS-GSWDKTLRLWDLAAGKTTR-RFEDHTKDVLSVAFSVDNRQIVSSS 414
CC SD +L+ GS D + +DL K H+K V V F VD+ +VSSS
Sbjct: 664 CCVQFPSDSGRSLAFGSADHKVYYYDLRNPKIPLCTMIGHSKTVSYVKF-VDSSTLVSSS 722
Query: 415 RDKTIKLWN 441
D T+KLW+
Sbjct: 723 TDNTLKLWD 731
Score = 30.3 bits (65), Expect = 0.89
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = +1
Query: 280 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRD 420
S ++D +++WD+A + ++H K V S+ S + +++S D
Sbjct: 601 SSNFDGVVQIWDVARSQLVTEMKEHKKRVWSIDISSADPTLLASGSD 647
>At3g15880.2 68416.m02009 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1135
Score = 35.9 bits (79), Expect = 0.018
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 292 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA-FSVDNRQ-IVSSSRDKTIKLW 438
DKT+++WD G FE H V SV +N Q I S++ D IK W
Sbjct: 487 DKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAW 537
Score = 32.3 bits (70), Expect = 0.22
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
D N G D +++++++ + + + H K V +AFS +VSS D + +W+
Sbjct: 898 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWS 957
Score = 31.1 bits (67), Expect = 0.51
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +1
Query: 352 HTKDVLSVAFSVDNRQ--IVSSSRDKTIKLWNTLAECK-YTIQDDGHSDWVSCVRSH 513
H +V +AFS N+Q +V+ DKTIK+W+ + K +T +GH V V H
Sbjct: 463 HAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTF--EGHEAPVYSVCPH 517
>At3g15880.1 68416.m02008 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (7 copies)
Length = 1137
Score = 35.9 bits (79), Expect = 0.018
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 292 DKTLRLWDLAAGKTTRRFEDHTKDVLSVA-FSVDNRQ-IVSSSRDKTIKLW 438
DKT+++WD G FE H V SV +N Q I S++ D IK W
Sbjct: 487 DKTIKVWDAVTGNKLHTFEGHEAPVYSVCPHQKENIQFIFSTAVDGKIKAW 537
Score = 32.3 bits (70), Expect = 0.22
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
D N G D +++++++ + + + H K V +AFS +VSS D + +W+
Sbjct: 898 DNNIIAIGMDDSSIQIYNVRVDEVKSKLKGHQKRVTGLAFSNVLNVLVSSGADSQLCVWS 957
Score = 31.1 bits (67), Expect = 0.51
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +1
Query: 352 HTKDVLSVAFSVDNRQ--IVSSSRDKTIKLWNTLAECK-YTIQDDGHSDWVSCVRSH 513
H +V +AFS N+Q +V+ DKTIK+W+ + K +T +GH V V H
Sbjct: 463 HAGNVNDLAFSQPNQQLCVVTCGEDKTIKVWDAVTGNKLHTF--EGHEAPVYSVCPH 517
>At1g80710.1 68414.m09470 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to damage-specific DNA-binding protein 2 (DDB2)
[Mus musculus]
Length = 516
Score = 35.9 bits (79), Expect = 0.018
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +1
Query: 307 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIV-SSSRDKTIKLWN 441
+WDL AGK+ +E H + + S+ F+ N ++ +SS D T LW+
Sbjct: 332 VWDLRAGKSVFHWELHERRINSIDFNPQNPHVMATSSTDGTACLWD 377
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 35.5 bits (78), Expect = 0.024
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 9/72 (12%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWD---LAAGKTTR---RFEDHTKDVLSVAFSVDNRQIVSSSR 417
S G SG D + +WD ++ TT+ R E+HT V ++A+ ++++
Sbjct: 275 SGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGG 334
Query: 418 ---DKTIKLWNT 444
D+TIK WNT
Sbjct: 335 GGGDRTIKFWNT 346
Score = 33.5 bits (73), Expect = 0.096
Identities = 16/70 (22%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +1
Query: 292 DKTLRLWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECKYT 465
D T+ LWD + G T+ ++ V S+ ++ D R + + ++LW++ + +
Sbjct: 159 DHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLR 218
Query: 466 IQDDGHSDWV 495
GH V
Sbjct: 219 TLKGGHQSRV 228
Score = 32.3 bits (70), Expect = 0.22
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +1
Query: 283 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
G L LW + HT VL +A S D + S++ D+T++ WN
Sbjct: 378 GFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWN 430
Score = 27.5 bits (58), Expect = 6.3
Identities = 11/44 (25%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 343 FEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN-TLAECKYTIQ 471
+ HT++V + +S +Q+ S D + +W+ ++A T Q
Sbjct: 262 YRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQ 305
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 35.5 bits (78), Expect = 0.024
Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 9/72 (12%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWD---LAAGKTTR---RFEDHTKDVLSVAFSVDNRQIVSSSR 417
S G SG D + +WD ++ TT+ R E+HT V ++A+ ++++
Sbjct: 265 SGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRLEEHTSAVKALAWCPFQANLLATGG 324
Query: 418 ---DKTIKLWNT 444
D+TIK WNT
Sbjct: 325 GGGDRTIKFWNT 336
Score = 33.5 bits (73), Expect = 0.096
Identities = 16/70 (22%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +1
Query: 292 DKTLRLWDLAAGKTTR--RFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECKYT 465
D T+ LWD + G T+ ++ V S+ ++ D R + + ++LW++ + +
Sbjct: 149 DHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLR 208
Query: 466 IQDDGHSDWV 495
GH V
Sbjct: 209 TLKGGHQSRV 218
Score = 32.3 bits (70), Expect = 0.22
Identities = 16/53 (30%), Positives = 24/53 (45%)
Frame = +1
Query: 283 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
G L LW + HT VL +A S D + S++ D+T++ WN
Sbjct: 368 GFTQNQLTLWKYPSMVKMAELTGHTSRVLYMAQSPDGCTVASAAGDETLRFWN 420
Score = 27.5 bits (58), Expect = 6.3
Identities = 11/44 (25%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +1
Query: 343 FEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN-TLAECKYTIQ 471
+ HT++V + +S +Q+ S D + +W+ ++A T Q
Sbjct: 252 YRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQ 295
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 35.5 bits (78), Expect = 0.024
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSS---SRDKT 426
SSD SG D L +W+ + + RF +H V ++A+S + +++S + D+
Sbjct: 301 SSDNRELASGGNDNKLFVWNQHSTQPVLRFCEHAAAVKAIAWSPHHFGLLASGGGTADRC 360
Query: 427 IKLWNT 444
I+ WNT
Sbjct: 361 IRFWNT 366
Score = 33.9 bits (74), Expect = 0.073
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 280 SGSWDKTLRLWDLAAGKT-TRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
SGS DK++ D+ + + + H ++ + +S DNR++ S D + +WN
Sbjct: 266 SGSRDKSILQRDIRTQEDHVSKLKGHKSEICGLKWSSDNRELASGGNDNKLFVWN 320
Score = 31.5 bits (68), Expect = 0.39
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +1
Query: 265 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 429
G + G+ T+++WD+ K R E H V ++A+S + + S SRDK+I
Sbjct: 221 GTHLAIGTSSGTVQIWDVLRCKNIRTMEGHRLRVGALAWS--SSVLSSGSRDKSI 273
Score = 30.3 bits (65), Expect = 0.89
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +1
Query: 352 HTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECK 459
H+ VL +A S D + IV+ + D+T++ WN K
Sbjct: 421 HSYRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSPK 456
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 35.1 bits (77), Expect = 0.031
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 247 CCA-SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 381
CCA S DG Y L+G D +++W + K E H V VAF
Sbjct: 350 CCAWSMDGKYLLTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 395
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 35.1 bits (77), Expect = 0.031
Identities = 23/65 (35%), Positives = 30/65 (46%)
Frame = +1
Query: 247 CCASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 426
CC D + S D +R D AGK H K V V +S Q+++ S DKT
Sbjct: 63 CCFHDDSS-GFSVCADTKVRRIDFNAGKEDV-LGTHEKPVRCVEYSYAAGQVITGSWDKT 120
Query: 427 IKLWN 441
IK W+
Sbjct: 121 IKCWD 125
Score = 29.9 bits (64), Expect = 1.2
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 277 LSGSWDKTLRLWDLAAGKTTRR 342
++GSWDKT++ WD T R
Sbjct: 113 ITGSWDKTIKCWDPRGASGTER 134
Score = 29.5 bits (63), Expect = 1.6
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDN 393
S++ ++ L SWDK++RL+D A G R H VL F D+
Sbjct: 25 SNNSDHLLVSSWDKSVRLYD-ANGDLMRGEFKHGGAVLDCCFHDDS 69
>At5g27030.1 68418.m03224 WD-40 repeat family protein contains 8 WD-40
repeats (PF00400) (2 weak)
Length = 1108
Score = 34.7 bits (76), Expect = 0.042
Identities = 16/60 (26%), Positives = 28/60 (46%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
D N G D T+ ++++ + + + H K + +AFS +VSS D I W+
Sbjct: 873 DNNVIAIGMEDSTIHIYNVRVDEVKSKLKGHQKRITGLAFSTALNILVSSGADAQICFWS 932
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 34.3 bits (75), Expect = 0.055
Identities = 20/83 (24%), Positives = 44/83 (53%), Gaps = 6/83 (7%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTR----RFEDHTKDVLSVAFSVDNRQIV-SSSRD 420
+S+G SGS D+T R+W++ ++ + HT V + + + +V ++S D
Sbjct: 29 NSNGTKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDPKHSDLVATASGD 88
Query: 421 KTIKLWNTLA-ECKYTIQDDGHS 486
K+++LW+ + +C ++ G +
Sbjct: 89 KSVRLWDARSGKCTQQVELSGEN 111
Score = 34.3 bits (75), Expect = 0.055
Identities = 15/63 (23%), Positives = 32/63 (50%)
Frame = +1
Query: 247 CCASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKT 426
C + + S DK++RLWD +GK T++ E +++ ++ + D + +RD
Sbjct: 73 CWDPKHSDLVATASGDKSVRLWDARSGKCTQQVELSGENI-NITYKPDGTHVAVGNRDDE 131
Query: 427 IKL 435
+ +
Sbjct: 132 LTI 134
Score = 33.9 bits (74), Expect = 0.073
Identities = 13/36 (36%), Positives = 24/36 (66%)
Frame = +1
Query: 334 TRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
+R ++ H K V SVA++ + ++ S S D+T ++WN
Sbjct: 13 SREYQGHKKKVHSVAWNSNGTKLASGSVDQTARIWN 48
Score = 33.9 bits (74), Expect = 0.073
Identities = 12/33 (36%), Positives = 23/33 (69%)
Frame = +2
Query: 74 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 172
L+GH V Q+ +PK+ D++ ++S DK++ +W
Sbjct: 62 LKGHTDSVDQLCWDPKHSDLVATASGDKSVRLW 94
Score = 32.3 bits (70), Expect = 0.22
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = +1
Query: 265 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
G Y GS D + LWD++ R F V +++F+ I S+S D I + N
Sbjct: 203 GRYFAVGSADSLVSLWDISDMLCLRTFTKLEWPVRTISFNYSGEYIASASEDLFIDIAN 261
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 34.3 bits (75), Expect = 0.055
Identities = 31/143 (21%), Positives = 55/143 (38%), Gaps = 6/143 (4%)
Frame = +1
Query: 103 NCN*SEIPGHDLIFLSRQNSHRVEADQRRKQLRYTSKAFIRSFALHF*CCAS---SDGNY 273
N N S G + R+ +++ E Q + + S H C +S + +
Sbjct: 233 NTNESTSEGESVSVKKRKGNNQAEESQSEGEA-------VTSLVGHTQCVSSVVWPEHDV 285
Query: 274 ALSGSWDKTLRLWDLAAGK-TTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTL- 447
S SWD ++R WD+ GK + F + + V + I + D +++W+
Sbjct: 286 IYSSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVG-GESSALIAAGGSDPILRVWDPRK 344
Query: 448 -AECKYTIQDDGHSDWVSCVRSH 513
Q HS W+S + H
Sbjct: 345 PGTSAPVFQFSSHSSWISACKWH 367
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 352 HTKDVLSVAFSVDNRQIVSSSRDKTIKLWNT 444
H V SV+ + SSS D TI LWNT
Sbjct: 204 HKASVQSVSAQKSGNMVCSSSWDCTINLWNT 234
Score = 27.9 bits (59), Expect = 4.8
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 253 ASSDGNYALSGSWDKTLRLWD 315
A GN S SWD T+ LW+
Sbjct: 213 AQKSGNMVCSSSWDCTINLWN 233
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 34.3 bits (75), Expect = 0.055
Identities = 31/143 (21%), Positives = 55/143 (38%), Gaps = 6/143 (4%)
Frame = +1
Query: 103 NCN*SEIPGHDLIFLSRQNSHRVEADQRRKQLRYTSKAFIRSFALHF*CCAS---SDGNY 273
N N S G + R+ +++ E Q + + S H C +S + +
Sbjct: 233 NTNESTSEGESVSVKKRKGNNQAEESQSEGEA-------VTSLVGHTQCVSSVVWPEHDV 285
Query: 274 ALSGSWDKTLRLWDLAAGK-TTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTL- 447
S SWD ++R WD+ GK + F + + V + I + D +++W+
Sbjct: 286 IYSSSWDHSVRRWDVETGKDSLNLFCGKALNTVDVG-GESSALIAAGGSDPILRVWDPRK 344
Query: 448 -AECKYTIQDDGHSDWVSCVRSH 513
Q HS W+S + H
Sbjct: 345 PGTSAPVFQFSSHSSWISACKWH 367
Score = 29.1 bits (62), Expect = 2.1
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 352 HTKDVLSVAFSVDNRQIVSSSRDKTIKLWNT 444
H V SV+ + SSS D TI LWNT
Sbjct: 204 HKASVQSVSAQKSGNMVCSSSWDCTINLWNT 234
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +1
Query: 271 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLA 450
+ LS S+D + LWDL + H VLS + +VS D +++ + +A
Sbjct: 373 HLLSASYDGKIMLWDLRTAWPLSVIDTHNDKVLSADW-WKGESVVSGGADSNLRISSGIA 431
Score = 27.9 bits (59), Expect = 4.8
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = +1
Query: 253 ASSDGNYALSGSWDKTLRLWD 315
A GN S SWD T+ LW+
Sbjct: 213 AQKSGNMVCSSSWDCTINLWN 233
>At3g13300.2 68416.m01675 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1309
Score = 34.3 bits (75), Expect = 0.055
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +2
Query: 62 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ 211
LR RGH+ VT +A + DM+ S S D + VWK++ PQ
Sbjct: 194 LRSLFRGHSQRVTDMAFFAEDVDMLASVSLDGKVFVWKISEGSEGEDQPQ 243
>At3g13300.1 68416.m01674 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1344
Score = 34.3 bits (75), Expect = 0.055
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +2
Query: 62 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQ 211
LR RGH+ VT +A + DM+ S S D + VWK++ PQ
Sbjct: 229 LRSLFRGHSQRVTDMAFFAEDVDMLASVSLDGKVFVWKISEGSEGEDQPQ 278
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 34.3 bits (75), Expect = 0.055
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 71 TLRGHNGWVTQIA-TNPKYPDMILSSSRDKTLIVWK 175
TL GH G V Q+A +PK+ ++ S S D +I+WK
Sbjct: 51 TLTGHRGPVWQVAWAHPKFGSLLASCSYDGQIILWK 86
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 34.3 bits (75), Expect = 0.055
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 253 ASSDGNYALSGSWDKTLRLWDLAAGKTT 336
A++DG Y LS D +RLWD+ +G+ T
Sbjct: 320 ATNDGMYLLSAGSDSRIRLWDIESGRNT 347
Score = 32.7 bits (71), Expect = 0.17
Identities = 12/49 (24%), Positives = 30/49 (61%)
Frame = +1
Query: 295 KTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
KT++ + + +G+TT H + V + F+ +++++ +S D+ I +W+
Sbjct: 379 KTVKAFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGSDRQILVWS 427
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 33.9 bits (74), Expect = 0.073
Identities = 17/66 (25%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFE-DHTKDVLSVAF--SVDNRQIVSSSRDKT 426
+S+G+ +SGS D + +W+ ++ K + HT ++ F + +VS + D
Sbjct: 59 NSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVPETSDELVVSGAGDAE 118
Query: 427 IKLWNT 444
++L+NT
Sbjct: 119 VRLFNT 124
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = +1
Query: 337 RRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECKYTIQDDGHSDWVSCVRSHP 516
+ E H V ++A++ + ++S S D I +WN + D GH+ + C + P
Sbjct: 44 QELEGHQGCVNALAWNSNGSLLISGSDDLRINIWNYSSRKLLHSIDTGHTANIFCTKFVP 103
Score = 27.5 bits (58), Expect = 6.3
Identities = 15/62 (24%), Positives = 26/62 (41%)
Frame = +1
Query: 265 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNT 444
G Y SGS D +W+ G+ + + + + + +S D TIK+W+
Sbjct: 633 GEYIASGSDDGRWFIWEKQTGRLMKVLVGDESVLNCIQCHPFDSVVATSGIDNTIKIWSP 692
Query: 445 LA 450
A
Sbjct: 693 TA 694
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 33.9 bits (74), Expect = 0.073
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +1
Query: 280 SGSWDKTLRLWDLAAGKT-TRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
SGS DK++ D+ + + H +V + +S DNR++ S D + +WN
Sbjct: 309 SGSRDKSILQRDIRCQEDHVSKLAGHKSEVCGLKWSYDNRELASGGNDNRLFVWN 363
Score = 33.9 bits (74), Expect = 0.073
Identities = 18/66 (27%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSS---SRDKT 426
S D SG D L +W+ + + ++ +HT V ++A+S +++S + D+
Sbjct: 344 SYDNRELASGGNDNRLFVWNQHSTQPVLKYSEHTAAVKAIAWSPHVHGLLASGGGTADRC 403
Query: 427 IKLWNT 444
I+ WNT
Sbjct: 404 IRFWNT 409
Score = 31.9 bits (69), Expect = 0.29
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 352 HTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECK 459
HT VL +A S D + IV+ + D+T++ WN K
Sbjct: 464 HTYRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSPK 499
Score = 29.1 bits (62), Expect = 2.1
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +1
Query: 265 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 429
G + G+ +++WD + K TR E H V ++A+ + + S SRDK+I
Sbjct: 264 GTHLAVGTSTGKVQIWDASRCKRTRTMEGHRLRVGALAWG--SSVLSSGSRDKSI 316
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 33.9 bits (74), Expect = 0.073
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +1
Query: 247 CCA-SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAF 381
CC+ S DG Y L+G D +++W + K E H V VAF
Sbjct: 350 CCSWSMDGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAF 395
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 33.9 bits (74), Expect = 0.073
Identities = 16/36 (44%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +2
Query: 71 TLRGHNGWVTQIA-TNPKYPDMILSSSRDKTLIVWK 175
TL GH G V ++A +PKY ++ S S D +I+WK
Sbjct: 51 TLTGHRGPVWEVAWAHPKYGSILASCSYDGQVILWK 86
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 33.5 bits (73), Expect = 0.096
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +1
Query: 301 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECK 459
+ LW + H+ VL +A S D + IV+ + D+T++ WN K
Sbjct: 410 IMLWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRFWNVFPSVK 462
Score = 31.9 bits (69), Expect = 0.29
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSS---SRDKT 426
S D SG D L +W+ + + + +HT V ++ +S +++S + D+
Sbjct: 307 SHDDRELASGGNDNQLLVWNNHSQQPILKLTEHTAAVKAITWSPHQSSLLASGGGTADRC 366
Query: 427 IKLWNT 444
I+ WNT
Sbjct: 367 IRFWNT 372
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +1
Query: 280 SGSWDKTLRLWDLAAGKT-TRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
SGS D+ + D+ + H +V + +S D+R++ S D + +WN
Sbjct: 272 SGSRDRNILQHDIRVQSDFVSKLVGHKSEVCGLKWSHDDRELASGGNDNQLLVWN 326
>At3g45620.1 68416.m04927 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats; similar to
PC326 protein (GI:200241) (PIR2:S37694) [Mus
musculus];Human (H326) translated mRNA - Homo sapiens,
EMBL:HS06631
Length = 481
Score = 33.5 bits (73), Expect = 0.096
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRF-EDHTKDVLSVAF--SVDNRQIVSSSRDKT 426
+S G+ +SGS D+ + LW+ +G + H ++V F D+R I++S D
Sbjct: 64 NSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCENVFQTKFIPFTDDRTIITSGADGQ 123
Query: 427 IKLWNTLAECK 459
++L L K
Sbjct: 124 VRLGQILENGK 134
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/50 (30%), Positives = 23/50 (46%)
Frame = +1
Query: 340 RFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAECKYTIQDDGHSD 489
+ H V +V F+ +VS S D+ I LWN L+ + GH +
Sbjct: 50 KLNGHEGCVNAVEFNSTGDVLVSGSDDRQIMLWNWLSGSRKLSYPSGHCE 99
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 33.5 bits (73), Expect = 0.096
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKL 435
+ D S SWD+T+++W + K + H V SV + + + S D T+K+
Sbjct: 144 AEDQGLLYSASWDRTVKVWRIHDLKCIESIKAHDDAVNSV--TTAESLVFTGSADGTVKV 201
Query: 436 W 438
W
Sbjct: 202 W 202
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 33.1 bits (72), Expect = 0.13
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = +1
Query: 283 GSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAE 453
G L LW + HT VL +A S + + S++ D+ ++LWN E
Sbjct: 362 GFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRLWNVFGE 418
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 33.1 bits (72), Expect = 0.13
Identities = 16/57 (28%), Positives = 32/57 (56%)
Frame = +1
Query: 268 NYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 438
N SG+ D ++++W L + + +HT V+S+ ++ ++S S D T+K+W
Sbjct: 278 NRLYSGAMDNSIKVWSLDNLQCIQTLTEHTSVVMSLI--CWDQFLLSCSLDNTVKIW 332
Score = 27.1 bits (57), Expect = 8.3
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 50 ETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 172
++ L L GH VT IA P D + ++S+D+T+ +W
Sbjct: 132 DSFSLLTQLDGHQKVVTGIAL-PSGSDKLYTASKDETVRIW 171
Score = 27.1 bits (57), Expect = 8.3
Identities = 8/34 (23%), Positives = 22/34 (64%)
Frame = +1
Query: 340 RFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
+ + H K V +A + ++ ++S+D+T+++W+
Sbjct: 139 QLDGHQKVVTGIALPSGSDKLYTASKDETVRIWD 172
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 33.1 bits (72), Expect = 0.13
Identities = 17/82 (20%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKT--------TRRFEDHTKDVLSVAFSVDNRQIVSS 411
S +G + + ++ +++W++ K + + H V + FS ++ QI+++
Sbjct: 248 SPNGRFLAAAAFTADVKVWEIVYQKDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQIITA 307
Query: 412 SRDKTIKLWNTLAECKYTIQDD 477
S+D +I++WN +Y + +D
Sbjct: 308 SKDGSIRVWN--INVRYHLDED 327
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 33.1 bits (72), Expect = 0.13
Identities = 17/87 (19%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Frame = +1
Query: 250 CASSDGNYALSGSWDKTLRLWDLAAGKTTRRFE-DHTKDVLSVAFSVDNRQIVSSSRDKT 426
C+ + + ++GS+D T+++WD + E +H V V + + + +++++ +
Sbjct: 186 CSPVNDSMLVTGSYDHTVKVWDARVHTSNWIAEINHGLPVEDVVY-LPSGGLIATAGGNS 244
Query: 427 IKLWNTLAECKYTIQDDGHSDWVSCVR 507
+K+W+ + K + H+ V+ +R
Sbjct: 245 VKVWDLIGGGKMVCSMESHNKTVTSLR 271
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 33.1 bits (72), Expect = 0.13
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 74 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 184
+ H G V Q+ +P + ++ SS D+ L+VW L R
Sbjct: 300 MSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNR 336
Score = 31.9 bits (69), Expect = 0.29
Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Frame = +1
Query: 271 YALSGSWDKTLRLWDLAAGKTTR------RFEDHTKDVLSVAFSVDNRQIV-SSSRDKTI 429
Y LSGS D+ + LWD++A + +E H + V++ + N + S+ D +
Sbjct: 183 YLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLFGSAGEDGRL 242
Query: 430 KLWNT 444
+W+T
Sbjct: 243 VIWDT 247
>At1g76260.1 68414.m08855 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to retinoblastoma A associated protein; RbAp48
(GI:3309245) [Xenopus laevis]
Length = 350
Score = 33.1 bits (72), Expect = 0.13
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 74 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 172
L GH W + NP+Y ++ILS D + +W
Sbjct: 248 LPGHTHWTWAVRCNPEYEELILSVGTDSAVNLW 280
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 33.1 bits (72), Expect = 0.13
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +2
Query: 74 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 172
L GH W + NP+Y +ILS+ D + +W
Sbjct: 248 LPGHTHWTWAVRCNPEYDGLILSAGTDSVVNLW 280
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 33.1 bits (72), Expect = 0.13
Identities = 20/62 (32%), Positives = 28/62 (45%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
DG + +S S D L + G FE H V S + + + S+S D T K+WN
Sbjct: 25 DGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCSLDKNAIRAASASADFTAKIWN 84
Query: 442 TL 447
L
Sbjct: 85 AL 86
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 32.7 bits (71), Expect = 0.17
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRF--EDHTKDVLSVAFSVDNRQIVSSSRD 420
+ + +S S DKTLR+WDL T + F + H V FS+ + ++S SR+
Sbjct: 464 ESHLLVSSSLDKTLRIWDLRKSWTPQPFVVKGHNDGV--SGFSIWGKDVISISRN 516
Score = 32.3 bits (70), Expect = 0.22
Identities = 14/36 (38%), Positives = 24/36 (66%)
Frame = +2
Query: 77 RGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 184
R H+G+VT++ + +++SSS DKTL +W L +
Sbjct: 451 RAHDGYVTKLVAPESH--LLVSSSLDKTLRIWDLRK 484
Score = 28.3 bits (60), Expect = 3.6
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Frame = +1
Query: 253 ASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIK 432
AS ++ +G RL+DL + H V + + ++ +VSSS DKT++
Sbjct: 420 ASVSPSWIAAGFSSGQCRLFDLRENGFISSWRAHDGYVTKLV-APESHLLVSSSLDKTLR 478
Query: 433 LWNTLAE-CKYTIQDDGHSDWVS 498
+W+ GH+D VS
Sbjct: 479 IWDLRKSWTPQPFVVKGHNDGVS 501
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 32.7 bits (71), Expect = 0.17
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Frame = +1
Query: 271 YALSGSWDKTLRLWDLAAGKTTR------RFEDHTKDVLSVAFSVDNRQIVSSSRDK-TI 429
Y LSGS D+ + LWD++A T + +E H + VA+ + N I S+ D +
Sbjct: 184 YLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQL 243
Query: 430 KLWN 441
+W+
Sbjct: 244 VIWD 247
Score = 32.3 bits (70), Expect = 0.22
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = +2
Query: 74 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 184
L H G V Q+ +P + ++ SS D+ L+VW + R
Sbjct: 301 LSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINR 337
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 32.7 bits (71), Expect = 0.17
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +2
Query: 47 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 178
SET+ +L GH V +I T P P +++++S+D+++ +W +
Sbjct: 117 SETI--HKSLVGHGDSVNEIRTQPLKPQLVITASKDESVRLWNV 158
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 32.7 bits (71), Expect = 0.17
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +1
Query: 292 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
D WD+ +GK F+ H+ + +V QI++ S D T ++W+
Sbjct: 180 DSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWD 229
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 32.7 bits (71), Expect = 0.17
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRF--ED-HTKDVLSVAFSVDNRQIVSSSRDKT 426
S DG ++ S DK ++D G ED H + +V++S D++++++ S DK+
Sbjct: 60 SPDGTKFITVSSDKKGMIYDGKTGDKVGELASEDGHKGSIYAVSWSPDSKRVLTVSADKS 119
Query: 427 IKLW 438
K+W
Sbjct: 120 AKVW 123
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 32.3 bits (70), Expect = 0.22
Identities = 20/71 (28%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +1
Query: 307 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNR-QIVSSSRDKTIKLWNTLAECKYTIQDDGH 483
+WD +G F+ H++ VLS A +IV+ D + + K+ + H
Sbjct: 130 MWD--SGSNVGEFDGHSRRVLSCAIKPTRPFRIVTCGEDFLVNFYEG-PPFKFKLSSREH 186
Query: 484 SDWVSCVRSHP 516
S++V+CVR P
Sbjct: 187 SNFVNCVRFAP 197
Score = 30.7 bits (66), Expect = 0.68
Identities = 10/32 (31%), Positives = 22/32 (68%)
Frame = +1
Query: 346 EDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
+ H + +V++S D +Q+++ S DK+ K+W+
Sbjct: 229 DGHKGSIYAVSWSPDGKQVLTVSADKSAKIWD 260
>At3g16830.1 68416.m02149 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 32.3 bits (70), Expect = 0.22
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 438
D N G D ++ ++++ + + + H K + +AFS +VSS D + W
Sbjct: 884 DNNIIAIGMEDSSIHIYNVRVDEVKTKLKGHQKHITGLAFSTALNILVSSGADAQLFFW 942
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 32.3 bits (70), Expect = 0.22
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKD 363
S G LSGS DKT+R+W + GK TKD
Sbjct: 904 SETGECVLSGSADKTIRVWQIVKGKLECAEVIKTKD 939
Score = 31.1 bits (67), Expect = 0.51
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +1
Query: 280 SGSWDKTLRLWDLAAGKTTRRFE--DHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 438
SG D ++R+W++ T ++ +H V + S ++S S DKTI++W
Sbjct: 868 SGFSDGSIRVWNVNKKIATLLWDIKEHKSTVTCFSLSETGECVLSGSADKTIRVW 922
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 32.3 bits (70), Expect = 0.22
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +1
Query: 307 LWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
LW++ K R + H+ V + FS D+ ++S SRD+ +++
Sbjct: 631 LWEVGTWKAVGRLQSHSLTVTHLEFSYDDTLLLSVSRDRHFSVFS 675
Score = 31.5 bits (68), Expect = 0.39
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = +1
Query: 328 KTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
K + E H + + + +++ Q +SSRDKT+K+W+
Sbjct: 687 KLMAKVEAHKRIIWACSWNPFGHQFATSSRDKTVKIWS 724
Score = 29.9 bits (64), Expect = 1.2
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 8/43 (18%)
Frame = +2
Query: 74 LRGHNGWVTQIA------TNPKYPD--MILSSSRDKTLIVWKL 178
L+GH W+ + T + P+ M++SSS+DK + +WKL
Sbjct: 219 LKGHTDWIRSLDFSLPLHTTEEIPNSIMLVSSSQDKVIRIWKL 261
Score = 27.5 bits (58), Expect = 6.3
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = +2
Query: 59 KLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRD 187
KL + H + + NP + +SSRDKT+ +W + D
Sbjct: 687 KLMAKVEAHKRIIWACSWNP-FGHQFATSSRDKTVKIWSVEND 728
>At1g15850.1 68414.m01902 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
mRNA-associated protein mrnp 41 (SP:P78406) [Homo
sapiens]; similar to mitotic checkpoint protein
GI:9294423 from [Arabidopsis thaliana]
Length = 140
Score = 32.3 bits (70), Expect = 0.22
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = +1
Query: 247 CCA-SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDK 423
C A DG +G DK ++W L +G H +A+ +V+ S DK
Sbjct: 78 CSAWKDDGTTVFTGGCDKQAKMWPLLSGAQPSTVAMHDAPFNQIAWIPGMNLLVTGSWDK 137
Query: 424 TIK 432
T+K
Sbjct: 138 TLK 140
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 31.9 bits (69), Expect = 0.29
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSS 414
DG Y LSGS D TL W++ R+E++ V + ++ V++S
Sbjct: 255 DGKYVLSGSGDGTLHAWNIENPSEVARWENNIGVVSCLKWAPRRAMFVAAS 305
Score = 27.9 bits (59), Expect = 4.8
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 250 CASSDGNYALSGSWDKTLRLWDL 318
C S + +SGS D+++RLWDL
Sbjct: 121 CMSPINDSFMSGSLDRSVRLWDL 143
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 31.9 bits (69), Expect = 0.29
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFED-HTKDVLSVAFS--VDNRQIVSSSRDKT 426
+++G+ +SGS D+ + LWD G F H +V F D+R IV+ + D
Sbjct: 68 NAEGDVLISGSDDRRVVLWDWQLGNVKLSFHSGHANNVFQAKFMPFSDDRTIVTCAADGM 127
Query: 427 IK 432
++
Sbjct: 128 VR 129
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 337 RRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN-TLAECKYTIQDDGHSD 489
++ E H V +V+F+ + ++S S D+ + LW+ L K + GH++
Sbjct: 53 KKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFH-SGHAN 103
>At4g34280.1 68417.m04873 transducin family protein / WD-40 repeat
family protein similar to TUPA (GI:11066216) [Emericella
nidulans]; similar to damage-specific DNA binding
protein 2, Homo sapiens ,PIR2:I38909; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies,1
weak)|19797453|gb|AU229277.1|AU229277
Length = 783
Score = 31.9 bits (69), Expect = 0.29
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Frame = +1
Query: 280 SGSWDKTLRLWDLAAGKTTRRF-EDHTKDVLSVAFSVDNRQIVSSSRDKTIK 432
+ S+DK ++LWDL + + TK + V FS D+R +++S+ D ++
Sbjct: 601 TSSFDKDVKLWDLRQEPSRPCYTASSTKGNVMVCFSPDDRYLLASAVDNEVR 652
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 31.9 bits (69), Expect = 0.29
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 6/86 (6%)
Frame = +1
Query: 283 GSWDKTLRLWDLAA--GKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAEC 456
GS+D +W+ A ++ H +V SV+++ + + RDK++ +W E
Sbjct: 66 GSFDGNTCVWENFATDSESVSVLRGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEE 125
Query: 457 KYTIQD----DGHSDWVSCVRSHPIM 522
GHS+ V V HP M
Sbjct: 126 DDEFDTIAVLTGHSEDVKMVLWHPTM 151
Score = 31.5 bits (68), Expect = 0.39
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 74 LRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWK 175
L GH V +A NP +I S S DKT+ +W+
Sbjct: 16 LEGHTDRVWNVAWNPAADGVIASCSADKTVRIWE 49
Score = 30.3 bits (65), Expect = 0.89
Identities = 19/77 (24%), Positives = 41/77 (53%)
Frame = +2
Query: 23 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYG 202
+++ F+ SE++ + LRGH V ++ N ++ + RDK++ +W++ +E++
Sbjct: 74 VWENFATDSESVSV---LRGHESEVKSVSWNAS-GSLLATCGRDKSVWIWEIQPEEDDEF 129
Query: 203 IPQKRLYGHSHFISDVV 253
L GHS + V+
Sbjct: 130 DTIAVLTGHSEDVKMVL 146
Score = 27.5 bits (58), Expect = 6.3
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 337 RRFEDHTKDVLSVAFS-VDNRQIVSSSRDKTIKLW 438
++ E HT V +VA++ + I S S DKT+++W
Sbjct: 14 QKLEGHTDRVWNVAWNPAADGVIASCSADKTVRIW 48
>At2g25420.1 68415.m03045 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (3 repeats)
Length = 717
Score = 31.9 bits (69), Expect = 0.29
Identities = 19/67 (28%), Positives = 33/67 (49%)
Frame = +1
Query: 265 GNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNT 444
G+ G D ++ + L++ K + E H + + +AFS +VSS D + LW+T
Sbjct: 481 GDLLAVGLDDGSIFIHCLSSRKVKEKLEGHDQKITCLAFSRCFNVLVSSDSDGKLCLWST 540
Query: 445 LAECKYT 465
+ K T
Sbjct: 541 KSWVKLT 547
>At4g11270.1 68417.m01823 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TGF-beta resistance-associated protein TRAG
(GI:15624071) {Mus musculus}; similar to
beta-transducin repeats containing protein - Homo
sapiens,PID:e1284220; 3' EST no_NP:TC8031
Length = 1446
Score = 31.5 bits (68), Expect = 0.39
Identities = 16/45 (35%), Positives = 22/45 (48%)
Frame = +1
Query: 250 CASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 384
C SS + +SGS D T+R+WDL +G H V + S
Sbjct: 546 CNSS--HVLISGSMDCTIRIWDLESGNVIMIMHHHVAPVRQIILS 588
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 31.1 bits (67), Expect = 0.51
Identities = 12/49 (24%), Positives = 30/49 (61%)
Frame = +1
Query: 295 KTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
KT++ + + +G+TT H + V + F+ +++++ +S D+ I +W+
Sbjct: 379 KTVKGFGMWSGRTTLMLRGHYESVNTCCFNSNDQELYTSGADRQIIVWS 427
Score = 30.7 bits (66), Expect = 0.68
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = +1
Query: 253 ASSDGNYALSGSWDKTLRLWDLAAGKTT 336
A++DG Y LS +RLWD+ +G+ T
Sbjct: 320 ATNDGMYLLSAGSYSRIRLWDIESGRNT 347
>At1g03110.1 68414.m00288 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat domain 4 protein (GI:9955698) [Mus
musculus]
Length = 427
Score = 31.1 bits (67), Expect = 0.51
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 271 YALSGSWDKTLRLWDLAAG 327
Y +SGS D T+RLWD+ +G
Sbjct: 221 YLMSGSGDSTVRLWDITSG 239
>At4g29380.1 68417.m04197 protein kinase family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat; contains Pfam PF00069: Protein kinase domain;
contains PF02985: HEAT repeat; similar to adaptor protein
(GI:1817584) [Homo sapiens]; similar to VPS15 protein
(GI:6103009) [Pichia pastoris]
Length = 1494
Score = 30.7 bits (66), Expect = 0.68
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +1
Query: 325 GKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNT 444
G ++H V +A S D+ VS+S D T+K+W++
Sbjct: 1071 GVLVAHLQEHRSAVNDIATSSDHSFFVSASDDSTVKVWDS 1110
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = +1
Query: 352 HTKDVLSVA-FSVDNRQIVSSSRDKTIKLW 438
H V S+A ++ R ++SSSRD IK+W
Sbjct: 1464 HRDSVQSLASVKLNQRLLISSSRDGAIKVW 1493
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 30.7 bits (66), Expect = 0.68
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 301 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
+RLWD+ +GK + E + V S S D R I ++ T+K W+
Sbjct: 170 VRLWDVRSGKIVQTLETKS-PVTSAEVSQDGRYITTAD-GSTVKFWD 214
Score = 29.1 bits (62), Expect = 2.1
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
DG + +S S D L + G FE H V S + + S+S D + KLW+
Sbjct: 30 DGFFLISASKDSQPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAKLWD 89
Query: 442 TL 447
L
Sbjct: 90 AL 91
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 30.7 bits (66), Expect = 0.68
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 301 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
+RLWD+ +GK + E + V S S D R I ++ T+K W+
Sbjct: 170 VRLWDVRSGKIVQTLETKS-PVTSAEVSQDGRYITTAD-GSTVKFWD 214
Score = 28.7 bits (61), Expect = 2.7
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
DG + +S S D L + G FE H V S + + S+S D + KLW+
Sbjct: 30 DGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAKLWD 89
Query: 442 TL 447
L
Sbjct: 90 AL 91
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 30.7 bits (66), Expect = 0.68
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 301 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
+RLWD+ +GK + E + V S S D R I ++ T+K W+
Sbjct: 170 VRLWDVRSGKIVQTLETKS-PVTSAEVSQDGRYITTAD-GSTVKFWD 214
Score = 28.7 bits (61), Expect = 2.7
Identities = 19/62 (30%), Positives = 27/62 (43%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
DG + +S S D L + G FE H V S + + S+S D + KLW+
Sbjct: 30 DGFFLISASKDSHPMLRNGETGDWIGTFEGHKGAVWSSCLDNNALRAASASADFSAKLWD 89
Query: 442 TL 447
L
Sbjct: 90 AL 91
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 30.3 bits (65), Expect = 0.89
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +2
Query: 62 LRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDENNYGIPQKRLYG 226
LR RGH+ VT +A + ++ S S D + VWK++ E + G Q ++ G
Sbjct: 213 LRSLFRGHSQRVTDMAFFAEDVHLLASVSLDGKVFVWKIS--EGSEGDEQSQITG 265
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 30.3 bits (65), Expect = 0.89
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +1
Query: 343 FEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNT-LAECKYTIQDDGHSDWVSCVRSHPI 519
++ HT V S++ I S S D ++++W C Q D + + CV +P+
Sbjct: 419 YKGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRCLKVWQFD---EAIMCVAWNPL 475
Query: 520 MPTPLLYPVVG 552
P+L +G
Sbjct: 476 SRLPVLAVAMG 486
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 30.3 bits (65), Expect = 0.89
Identities = 24/81 (29%), Positives = 32/81 (39%), Gaps = 16/81 (19%)
Frame = +1
Query: 280 SGSWDKTLRLWDLAAGKTTRRFEDHT------KDVLSVAFSVDNRQIVS----------S 411
SGSWD T+RLW L+ + T D L + + N I+S
Sbjct: 642 SGSWDGTVRLWSLSDNSLLTVLGEETPGIIWRDDTLMKSMKIQNGAILSIAVNGKWLFTG 701
Query: 412 SRDKTIKLWNTLAECKYTIQD 474
DKTI + L K +QD
Sbjct: 702 GWDKTINVQGNLGRLKRNVQD 722
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = +1
Query: 358 KDVLSVAFSVDNRQIVSSSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRSHP 516
+ ++ AFS D R + S+ D T+K+ + C + + WV VR HP
Sbjct: 107 RSTIAAAFSTDGRTLASTHGDHTVKIIDCETGNCLKVLTGHRRTPWV--VRFHP 158
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 68 GTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT 181
G + GH V+ +A NP Y I S+S D + +W ++
Sbjct: 50 GAMDGHRDGVSCMAKNPNYLKGIFSASMDGDIRLWDIS 87
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +1
Query: 202 YTSKAFIRSFALHF*CCASSDGNYALSGSWDKTLRLWDLAAGK 330
Y +K R F + + C D Y +SGS D LRLW A +
Sbjct: 317 YHTKRMQRVFCVKYSC----DATYVISGSDDTNLRLWKAKASE 355
>At4g21130.1 68417.m03055 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); some
similarity to a group of proteins with homology to
mammalian apoptosis regulators identified in zebrafish
(PUBMED:10917738)Apaf-1(gi:7677507)
Length = 537
Score = 29.9 bits (64), Expect = 1.2
Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 15/77 (19%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTR---------------RFEDHTKDVLSVAFSVD 390
SSDG Y +G D + LWD+ + + F H V S+ F
Sbjct: 215 SSDGRYLATGGVDCHVHLWDIRTREHVQVNKLKNNQVKDSVHCAFTGHCGIVSSLCFREG 274
Query: 391 NRQIVSSSRDKTIKLWN 441
++ S S D T+ +WN
Sbjct: 275 TAELFSGSYDGTLSIWN 291
Score = 28.7 bits (61), Expect = 2.7
Identities = 17/47 (36%), Positives = 23/47 (48%)
Frame = +1
Query: 301 LRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
LR+ DL + R H V VA S D+ + S S+D TI W+
Sbjct: 127 LRVQDLQSSDKFRVIVKHQHSVTGVALSDDDSRGFSVSKDGTILHWD 173
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 29.9 bits (64), Expect = 1.2
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Frame = +2
Query: 47 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLT-----RDENNYGIPQ 211
S L+L +L H V + + Y MI SSS D T+I+W L+ R N+ +P
Sbjct: 3311 SRRLRLEKSLCAHTAKVICLRVSQPYM-MIASSSDDCTVIIWDLSSLSFVRQLPNFSVPV 3369
Query: 212 KRLYGHSHFISDVVRLVTVITHFPVLGTRLCVCGISLQARLPDD 343
+Y + V +V+ + + G L V S +LP D
Sbjct: 3370 TVVYINDLTGEIVTAAGSVLAVWSINGDCLSVVNTS---QLPTD 3410
Score = 28.7 bits (61), Expect = 2.7
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLW----DLAAGKTTRRFED----HTKDVLSVAFSVDNRQIVSS 411
S DG ++G+ D + +W D G R E HT V+ + S I SS
Sbjct: 3283 SHDGRIVVTGAEDGLVSVWRVSKDGPRGSRRLRLEKSLCAHTAKVICLRVSQPYMMIASS 3342
Query: 412 SRDKTIKLWN 441
S D T+ +W+
Sbjct: 3343 SDDCTVIIWD 3352
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +1
Query: 280 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
SGS D +RLW+ G+ R D + + S+AF + +S K + +W+
Sbjct: 163 SGSLDHEVRLWNAKTGECIRT-HDFYRPIASIAFHAGGELLAVASGHK-LHIWH 214
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 358 KDVLSVAFSVDNRQIVSSSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRSHP 516
+ ++ AFS D R + S+ D T+K+ + +C + + WV VR HP
Sbjct: 104 RSTIAAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWV--VRFHP 155
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/54 (29%), Positives = 27/54 (50%)
Frame = +1
Query: 280 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
SGS D +RLW+ G+ R D + + S+AF + +S K + +W+
Sbjct: 163 SGSLDHEVRLWNAKTGECIRT-HDFYRPIASIAFHAGGELLAVASGHK-LHIWH 214
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 358 KDVLSVAFSVDNRQIVSSSRDKTIKLWN-TLAECKYTIQDDGHSDWVSCVRSHP 516
+ ++ AFS D R + S+ D T+K+ + +C + + WV VR HP
Sbjct: 104 RSTIAAAFSSDGRTLASTHGDHTVKIIDCETGKCLKILTGHRRTPWV--VRFHP 155
>At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4
WD-40 repeats (PF00400);low similarity to
photomorphogenesis repressor (COP1) GI:2702280
[Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea
nil]
Length = 343
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/26 (50%), Positives = 21/26 (80%), Gaps = 3/26 (11%)
Frame = +1
Query: 247 CCASSDGN--YAL-SGSWDKTLRLWD 315
CC SS+ + Y++ +GS+D+TLR+WD
Sbjct: 214 CCISSNPSDPYSIFTGSYDETLRVWD 239
Score = 27.5 bits (58), Expect = 6.3
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = +1
Query: 268 NYALSGSWDKTLRLWDLAAGKTTRR-FED---HTKDVLSVAFSV-DNRQIVSSSRDKTIK 432
N +GS D WD+ R F++ HT V ++ + D I + S D+T++
Sbjct: 177 NLVYTGSDDCKFSCWDIRDSPADNRVFQNSKVHTMGVCCISSNPSDPYSIFTGSYDETLR 236
Query: 433 LWNT 444
+W+T
Sbjct: 237 VWDT 240
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +2
Query: 83 HNGWVTQIATNPKYPDMILSSSRDKTLIVW 172
H V I++NP P I + S D+TL VW
Sbjct: 209 HTMGVCCISSNPSDPYSIFTGSYDETLRVW 238
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +1
Query: 262 DGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSV 387
DG ++ D L+LW + G+ R +E H + V SV
Sbjct: 123 DGGTVVTAGTDGCLKLWSVEDGRVIRTYEGHVNNRNFVGLSV 164
>At1g18830.1 68414.m02345 transducin family protein / WD-40 repeat
family protein similar to Sec31p (GI:13928450) {Oryza
sativa}
Length = 969
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 23 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKL 178
L+ P S S + L H G V + N K P+ + S + D T+ +W L
Sbjct: 94 LWNPISSESGEIAHVRDLSKHKGPVRGLEFNVKSPNQLASGADDGTVCIWDL 145
>At5g61560.1 68418.m07725 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 796
Score = 29.1 bits (62), Expect = 2.1
Identities = 21/79 (26%), Positives = 31/79 (39%), Gaps = 2/79 (2%)
Frame = +1
Query: 310 WDLAAGKTTRRFEDHTKDVLSVAFSVDNR--QIVSSSRDKTIKLWNTLAECKYTIQDDGH 483
W L + R D T SV + + S D + + +E +++ D H
Sbjct: 127 WKLKRSNLSSRIADATPRFCSVHVISKGKLLNVRKSDMDTETSIADDRSESRFS--SDSH 184
Query: 484 SDWVSCVRSHPIMPTPLLY 540
S VS SH TPLL+
Sbjct: 185 SGTVSSTSSHQFSSTPLLF 203
>At5g05970.1 68418.m00661 transducin family protein / WD-40 repeat
family protein contains similarity to regulatory protein
Nedd1; contains Pfam PF00400: WD domain, G-beta repeat
(6 copies, 2 weak)|19804256|gb|AV785466.1|AV785466
Length = 781
Score = 29.1 bits (62), Expect = 2.1
Identities = 11/48 (22%), Positives = 23/48 (47%)
Frame = +1
Query: 271 YALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSS 414
Y SG + +++WDL ++ + HT + V ++ + + S S
Sbjct: 107 YICSGGTGQIVKIWDLQRKLCIKKLKGHTSTITGVMYNCKDEHLASVS 154
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +1
Query: 352 HTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
H K V V +S Q+++ S DKT+K W+
Sbjct: 97 HDKAVRCVEYSYAAGQVITGSWDKTVKCWD 126
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVD 390
S++ ++ L SWDK +RL+D++ F H VL F D
Sbjct: 26 SNNSDHLLVSSWDKRVRLYDVSTNSLKGEFL-HGGAVLDCCFHDD 69
Score = 27.9 bits (59), Expect = 4.8
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = +1
Query: 277 LSGSWDKTLRLWD 315
++GSWDKT++ WD
Sbjct: 114 ITGSWDKTVKCWD 126
>At3g09080.1 68416.m01067 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats; similar to
JNK-binding protein JNKBP1 (GP:6069583) [Mus musculus]
Length = 1026
Score = 29.1 bits (62), Expect = 2.1
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +1
Query: 256 SSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFS 384
S DG Y +G L ++DL + T + H ++ S++FS
Sbjct: 394 SEDGKYLAAGDCGGNLHIYDLQESEYTCFMDAHEAEIQSLSFS 436
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 29.1 bits (62), Expect = 2.1
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 4/83 (4%)
Frame = +1
Query: 205 TSKAFIRSFALHF*C---CASSDGNY-ALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLS 372
T+ A + FA H+ S DG A+ G + L L D +GK E H S
Sbjct: 266 TNFALLNRFAFHWSVNNISTSPDGKLVAVLGDSPECL-LADTGSGKVIHGLEGHLDYSFS 324
Query: 373 VAFSVDNRQIVSSSRDKTIKLWN 441
A+ + + + + ++D T +LW+
Sbjct: 325 SAWHPNGQILATGNQDTTCRLWD 347
>At5g45760.2 68418.m05626 transducin family protein / WD-40 repeat
family protein
Length = 334
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +1
Query: 352 HTKDVLSVAFSV---DNRQIVSSSRDKTIKLWNTLAECKYTIQDDGHSD 489
H V VAFS+ R ++S DKT+K+W+ +C ++ +SD
Sbjct: 247 HNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCF-KCLDPNNNNNNSD 294
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = +1
Query: 352 HTKDVLSVAFSV---DNRQIVSSSRDKTIKLWNTLAECKYTIQDDGHSD 489
H V VAFS+ R ++S DKT+K+W+ +C ++ +SD
Sbjct: 273 HNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWDCF-KCLDPNNNNNNSD 320
>At5g14050.1 68418.m01644 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to unknown protein (ref|NP_057085.1)
Length = 546
Score = 28.7 bits (61), Expect = 2.7
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 364 VLSVAFSVDNRQIVSSSRDKTIKLWN-TLAECKYTIQDDG 480
V S+AFS D + ++SS D + +W+ +C Y D+G
Sbjct: 377 VRSLAFSEDGKHLLSSGGDGQVYVWDLRTMKCLYKGVDEG 416
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = +1
Query: 298 TLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWN 441
T+ +W + + + H V SVAF + + +S +++ IK+W+
Sbjct: 262 TVTMWKPTSQAPLVQMQCHPGPVSSVAFHPNGHLMATSGKERKIKIWD 309
>At1g51690.2 68414.m05825 serine/threonine protein phosphatase 2A
(PP2A) 55 kDa regulatory subunit B identical to 55 kDa B
regulatory subunit of phosphatase 2A (GI:710330)
[Arabidopsis thaliana]; similar to type 2A protein
serine/threonine phosphatase 55 kDa B regulatory
GI:1408460 [Arabidopsis thaliana]; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies, 3 weak)
Length = 512
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 241 F*CCASSDGNYALSGSWDKTLRLWDLAAGKT 333
F CC S +G A +GS+ R++ +A G T
Sbjct: 402 FECCISGNGLRAATGSYSNLFRVFGVAPGST 432
>At1g51690.1 68414.m05824 serine/threonine protein phosphatase 2A
(PP2A) 55 kDa regulatory subunit B identical to 55 kDa B
regulatory subunit of phosphatase 2A (GI:710330)
[Arabidopsis thaliana]; similar to type 2A protein
serine/threonine phosphatase 55 kDa B regulatory
GI:1408460 [Arabidopsis thaliana]; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies, 3 weak)
Length = 513
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +1
Query: 241 F*CCASSDGNYALSGSWDKTLRLWDLAAGKT 333
F CC S +G A +GS+ R++ +A G T
Sbjct: 403 FECCISGNGLRAATGSYSNLFRVFGVAPGST 433
>At5g60050.1 68418.m07530 PRLI-interacting factor-related contains
weak similarity to PRLI-interacting factor G
(GI:11139264) [Arabidopsis thaliana]
Length = 499
Score = 28.3 bits (60), Expect = 3.6
Identities = 10/29 (34%), Positives = 19/29 (65%)
Frame = +2
Query: 149 RDKTLIVWKLTRDENNYGIPQKRLYGHSH 235
R+ ++++KL R+E +Y + + LYG H
Sbjct: 271 REMKVLIFKLVREEADYDVSRDTLYGLCH 299
>At4g01860.2 68417.m00244 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 28.3 bits (60), Expect = 3.6
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +1
Query: 340 RFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 438
R H + + +S+D +IVS S D++ ++W
Sbjct: 230 RLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIW 262
>At4g01860.1 68417.m00243 transducin family protein / WD-40 repeat
family protein contains ten G-protein beta-subunit
(beta-transducin) WD-40 repeats
Length = 1308
Score = 28.3 bits (60), Expect = 3.6
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +1
Query: 340 RFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLW 438
R H + + +S+D +IVS S D++ ++W
Sbjct: 230 RLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIW 262
>At1g13030.1 68414.m01511 sphere organelles protein-related contains
weak similarity to Swiss-Prot:Q09003 sphere organelles
protein SPH-1 (Sphere protein 1) [Xenopus laevis]
Length = 608
Score = 28.3 bits (60), Expect = 3.6
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -1
Query: 348 LESSGSLACSEIPQTQSLVPRTGKCVITVTRRTTSEMKCE 229
L L E+ QTQ +V + K VIT+ + T E CE
Sbjct: 271 LREKTKLEKEELLQTQLVVAPSQKPVITIDHQATKEKHCE 310
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 27.9 bits (59), Expect = 4.8
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 71 TLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTR 184
T H V Q+ NPK ++ S + L+VW L+R
Sbjct: 312 TFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSR 349
>At3g63460.2 68416.m07146 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1102
Score = 27.9 bits (59), Expect = 4.8
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +2
Query: 23 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 190
L KP S+ S L+G+ G ++ I+ N K ++ S+S + T ++W L + +
Sbjct: 152 LLKP-SEPSHFPLLKGSGSATQGEISFISWNRKVQQILASTSYNGTTVIWDLRKQK 206
>At3g63460.1 68416.m07145 WD-40 repeat family protein hypothetical
protein contains similarity to ec31p [Oryza sativa]
gi|13928450|dbj|BAB47154; contains Pfam profile PF00400:
WD domain, G-beta repeat
Length = 1104
Score = 27.9 bits (59), Expect = 4.8
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +2
Query: 23 LFKPFSKMSETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVWKLTRDE 190
L KP S+ S L+G+ G ++ I+ N K ++ S+S + T ++W L + +
Sbjct: 152 LLKP-SEPSHFPLLKGSGSATQGEISFISWNRKVQQILASTSYNGTTVIWDLRKQK 206
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +2
Query: 47 SETLKLRGTLRGHNGWVTQIATNPKYPDMILSSSRDKTLIVW 172
S T+ RG GH V +A +P S D LI+W
Sbjct: 279 SPTVGPRGVYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILW 320
>At1g26330.1 68414.m03211 hypothetical protein
Length = 1196
Score = 27.9 bits (59), Expect = 4.8
Identities = 14/56 (25%), Positives = 26/56 (46%)
Frame = +1
Query: 253 ASSDGNYALSGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRD 420
A + + ++G+ D + +WDL+ G D +S + D+R I +S D
Sbjct: 1130 AGTISGHGVAGTLDGLVYMWDLSTGTKLGSLHDFKGQRVSCISTDDSRNICIASED 1185
>At4g03970.1 68417.m00561 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain; similar to At5g28170, At1g35110,
At1g44880, At3g42530, At4g19320, At5g36020, At3g43010,
At2g10350
Length = 1043
Score = 27.5 bits (58), Expect = 6.3
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
Frame = +2
Query: 116 PKYPDMILSSSRDKTLIVWK-LTRDENNYGIPQ 211
P D++L S KT+++WK LT + +PQ
Sbjct: 220 PGLLDLVLDDSTSKTILLWKRLTHPKQVISLPQ 252
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 27.5 bits (58), Expect = 6.3
Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = +1
Query: 265 GNYALSGSWDKTLRLWDLAAGKTTRRFEDH--TKDVLSVAFSVDNRQIVSSSRDKTIKLW 438
G+ +G D +WD + D+ + + SV++S +++ S+ DK++ LW
Sbjct: 35 GSLLAAGCADGGCVIWDFETRGIAKEIRDNDCSAAITSVSWSKYGHRLLVSAADKSLTLW 94
Query: 439 N 441
+
Sbjct: 95 D 95
>At5g04560.1 68418.m00456 DEMETER protein (DME) identical to DEMETER
protein [Arabidopsis thaliana] GI:21743571; contains
Pfam profile PF00730: HhH-GPD superfamily base excision
DNA repair protein
Length = 1729
Score = 27.1 bits (57), Expect = 8.3
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +1
Query: 292 DKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTI 429
D+T R+W+L GK + D KD + + R++ D I
Sbjct: 702 DETTRIWNLLMGKGDEKEGDEEKDKKKEKWWEEERRVFRGRADSFI 747
>At1g17720.2 68414.m02194 serine/threonine protein phosphatase 2A
(PP2A) 55 kDa regulatory subunit B identical to type 2A
protein serine/threonine phosphatase 55 kDa B regulatory
subunit (GI:1408460) [Arabidopsis thaliana]; similar to
55 kDa B regulatory subunit of phosphatase 2A GI:710330;
contains Pfam PF00400: WD domain, G-beta repeat (5
copies, 3 weak)
Length = 500
Score = 27.1 bits (57), Expect = 8.3
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +1
Query: 241 F*CCASSDGNYALSGSWDKTLRLWDLAAGKT 333
F CC S DG +GS+ R++ + G T
Sbjct: 390 FECCLSGDGLRVATGSYSNLFRVFGASQGST 420
>At1g17720.1 68414.m02193 serine/threonine protein phosphatase 2A
(PP2A) 55 kDa regulatory subunit B identical to type 2A
protein serine/threonine phosphatase 55 kDa B regulatory
subunit (GI:1408460) [Arabidopsis thaliana]; similar to
55 kDa B regulatory subunit of phosphatase 2A GI:710330;
contains Pfam PF00400: WD domain, G-beta repeat (5
copies, 3 weak)
Length = 501
Score = 27.1 bits (57), Expect = 8.3
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +1
Query: 241 F*CCASSDGNYALSGSWDKTLRLWDLAAGKT 333
F CC S DG +GS+ R++ + G T
Sbjct: 391 FECCLSGDGLRVATGSYSNLFRVFGASQGST 421
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 27.1 bits (57), Expect = 8.3
Identities = 14/59 (23%), Positives = 31/59 (52%)
Frame = +1
Query: 280 SGSWDKTLRLWDLAAGKTTRRFEDHTKDVLSVAFSVDNRQIVSSSRDKTIKLWNTLAEC 456
SGS D T+ +WDL++ R+ D + ++ + +IV+++ + +W+ +C
Sbjct: 3397 SGSDDCTVIIWDLSSLSFVRQLPDFPVPISAIYINDLTGEIVTAA-GTVLAVWSINGDC 3454
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,869,649
Number of Sequences: 28952
Number of extensions: 265981
Number of successful extensions: 1667
Number of sequences better than 10.0: 216
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1571
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1043173136
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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