Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00577X
         (519 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2PQU4 Cluster: Putative paralytic peptide-binding prot...   146   3e-34
UniRef50_Q76IB6 Cluster: Growth blocking peptide binding protein...    79   5e-14
UniRef50_Q88PD8 Cluster: Putative uncharacterized protein; n=2; ...    38   0.14 
UniRef50_UPI000023E458 Cluster: hypothetical protein FG04781.1; ...    35   0.97 
UniRef50_Q8DG68 Cluster: Tll2456 protein; n=1; Synechococcus elo...    34   2.2  
UniRef50_UPI0000EBEF05 Cluster: PREDICTED: similar to Laminin ga...    33   3.9  
UniRef50_A6PTA8 Cluster: Putative uncharacterized protein precur...    33   3.9  
UniRef50_Q9UVF6 Cluster: pH-response regulator protein palH/RIM2...    33   3.9  
UniRef50_A1W438 Cluster: Putative transmembrane protein; n=3; Co...    33   5.2  
UniRef50_UPI00015B8E8E Cluster: UPI00015B8E8E related cluster; n...    32   6.8  
UniRef50_Q2SC34 Cluster: Putative uncharacterized protein; n=1; ...    32   6.8  
UniRef50_Q3B4T5 Cluster: Putative uncharacterized protein; n=1; ...    32   9.0  
UniRef50_Q2L111 Cluster: Soluble lytic murein transglycosylase; ...    32   9.0  

>UniRef50_Q2PQU4 Cluster: Putative paralytic peptide-binding
           protein; n=1; Bombyx mori|Rep: Putative paralytic
           peptide-binding protein - Bombyx mori (Silk moth)
          Length = 436

 Score =  146 bits (354), Expect = 3e-34
 Identities = 80/167 (47%), Positives = 94/167 (56%), Gaps = 1/167 (0%)
 Frame = +3

Query: 12  MLTSSSPSQVKTXXXXXXXXXXXXDYDTNEDLLYPYSPTPYFGMYHLVKIPIGRGLLHHV 191
           M TS S SQVKT            DY TNEDLLYPYSP PYFGMYHLVKIPIGRGL+HHV
Sbjct: 1   MTTSFSHSQVKTPSEEKWEAASEPDYHTNEDLLYPYSPIPYFGMYHLVKIPIGRGLVHHV 60

Query: 192 DYWGEGKVTNLGKIRGFPQSYM*TNSLRSSVRATARESKYPTGFPSCLWTTATLPVTSEM 371
           DYWGEGKVTNL ++RGF +SY          +  ++  + P   P      +        
Sbjct: 61  DYWGEGKVTNLDRVRGFRRSYNVNEQFALVSKGHSKGKQIPNRIPVVSVDDSDTSSYIRD 120

Query: 372 TASKLLPSARGQ-SLSGALQTSPGSSTRPKLVVAYGYSDNSDDIQNL 509
              K +  + G  S   A   +   +    LVVAYGYS+NSDDIQNL
Sbjct: 121 GGVKTVTISTGPISKRCAADVARIVNASEGLVVAYGYSENSDDIQNL 167



 Score =  131 bits (316), Expect = 1e-29
 Identities = 63/68 (92%), Positives = 66/68 (97%)
 Frame = +2

Query: 254 HVNEQFALVSKGHSKGKQIPNRIPVVSMDDSDTSSYIRDDSVKTVTISTGPITKRCAADV 433
           +VNEQFALVSKGHSKGKQIPNRIPVVS+DDSDTSSYIRD  VKTVTISTGPI+KRCAADV
Sbjct: 82  NVNEQFALVSKGHSKGKQIPNRIPVVSVDDSDTSSYIRDGGVKTVTISTGPISKRCAADV 141

Query: 434 ARIVNASE 457
           ARIVNASE
Sbjct: 142 ARIVNASE 149


>UniRef50_Q76IB6 Cluster: Growth blocking peptide binding protein;
           n=1; Mythimna separata|Rep: Growth blocking peptide
           binding protein - Pseudaletia separata (Oriental
           armyworm) (Mythimna separata)
          Length = 430

 Score = 79.4 bits (187), Expect = 5e-14
 Identities = 38/71 (53%), Positives = 51/71 (71%), Gaps = 1/71 (1%)
 Frame = +2

Query: 254 HVNEQFALVSKGHSKGKQIPNRIPVVSMDDSDTSSYIRDDSVKTVTIS-TGPITKRCAAD 430
           +VN Q+ LVS G  K ++IPNRIPV S +D DTSSYI+D+SV TVT++    IT  CA D
Sbjct: 72  NVNHQYQLVSSGPDKDRKIPNRIPVRSDEDCDTSSYIKDNSVLTVTVAEASRITSSCAKD 131

Query: 431 VARIVNASEAR 463
           +ARI+N+   +
Sbjct: 132 IARIINSDHGK 142



 Score = 69.7 bits (163), Expect = 4e-11
 Identities = 47/149 (31%), Positives = 72/149 (48%), Gaps = 5/149 (3%)
 Frame = +3

Query: 84  DYDTNEDLLYPYSPTPYFGMYHLVKIPIG-RGLLHHVDYWGEGKVTNLGKIRGFPQSYM* 260
           +++TN +  +PYS TPY G Y+L KIPI    L+ HVDYWGEGKV     +RGF   Y  
Sbjct: 14  NFNTNINKQFPYSETPYQGDYYLEKIPISLNNLIQHVDYWGEGKVVTEEGVRGFSNCYNV 73

Query: 261 TNSLRSSVRATARESKYPTGFP----SCLWTTATLPVTSEMTASKLLPSARGQSLSGALQ 428
            +  +       ++ K P   P        T++ +   S +T +  +  A   + S A  
Sbjct: 74  NHQYQLVSSGPDKDRKIPNRIPVRSDEDCDTSSYIKDNSVLTVT--VAEASRITSSCAKD 131

Query: 429 TSPGSSTRPKLVVAYGYSDNSDDIQNLSV 515
            +   ++    V+ YG   NS +I  L+V
Sbjct: 132 IARIINSDHGKVIVYGVQGNSQEISELAV 160


>UniRef50_Q88PD8 Cluster: Putative uncharacterized protein; n=2;
           Pseudomonas putida|Rep: Putative uncharacterized protein
           - Pseudomonas putida (strain KT2440)
          Length = 195

 Score = 37.9 bits (84), Expect = 0.14
 Identities = 23/64 (35%), Positives = 33/64 (51%)
 Frame = +2

Query: 254 HVNEQFALVSKGHSKGKQIPNRIPVVSMDDSDTSSYIRDDSVKTVTISTGPITKRCAADV 433
           ++N+   L+S G   G  IPN I V   D  D    + D +V  VT+   PIT R A ++
Sbjct: 66  NLNKAGQLISNGPFAGGHIPNLIVVYEYDAPDFP--LDDHAVPHVTLMGAPITHRVAEEM 123

Query: 434 ARIV 445
            R+V
Sbjct: 124 CRVV 127


>UniRef50_UPI000023E458 Cluster: hypothetical protein FG04781.1;
           n=1; Gibberella zeae PH-1|Rep: hypothetical protein
           FG04781.1 - Gibberella zeae PH-1
          Length = 438

 Score = 35.1 bits (77), Expect = 0.97
 Identities = 19/62 (30%), Positives = 28/62 (45%)
 Frame = +3

Query: 321 FPSCLWTTATLPVTSEMTASKLLPSARGQSLSGALQTSPGSSTRPKLVVAYGYSDNSDDI 500
           F S    T +LP+T         P   G++ SG +  SPG + +   +  Y  SD S  I
Sbjct: 252 FTSASGATVSLPITQNSADIVYQPLTSGETYSGDINASPGPAFQSAKMALYEKSDGSVHI 311

Query: 501 QN 506
           Q+
Sbjct: 312 QH 313


>UniRef50_Q8DG68 Cluster: Tll2456 protein; n=1; Synechococcus
           elongatus|Rep: Tll2456 protein - Synechococcus elongatus
           (Thermosynechococcus elongatus)
          Length = 452

 Score = 33.9 bits (74), Expect = 2.2
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = -2

Query: 167 NRDLHEVVHTEVGCWGVRIQQVLICVVVWLRGGFPFFL 54
           NR+LH +     G +G +I  +LI V++ L GG  F++
Sbjct: 95  NRNLHYIAPQTSGLYGAQISALLIIVLIMLFGGLAFYI 132


>UniRef50_UPI0000EBEF05 Cluster: PREDICTED: similar to Laminin
           gamma-1 chain precursor (Laminin B2 chain), partial;
           n=1; Bos taurus|Rep: PREDICTED: similar to Laminin
           gamma-1 chain precursor (Laminin B2 chain), partial -
           Bos taurus
          Length = 495

 Score = 33.1 bits (72), Expect = 3.9
 Identities = 25/76 (32%), Positives = 30/76 (39%)
 Frame = +3

Query: 168 GRGLLHHVDYWGEGKVTNLGKIRGFPQSYM*TNSLRSSVRATARESKYPTGFPSCLWTTA 347
           G G   H  + G  +    G+  G P S     SLRS  R  AR +  P   P   WT A
Sbjct: 56  GAGREQHGLFPGRPRGEGAGRENGHPASLRNFGSLRSPPRGAARWT--PGRTPGLAWTRA 113

Query: 348 TLPVTSEMTASKLLPS 395
           T   T    A+   PS
Sbjct: 114 TAQTTRGSRANSKRPS 129


>UniRef50_A6PTA8 Cluster: Putative uncharacterized protein precursor;
            n=1; Victivallis vadensis ATCC BAA-548|Rep: Putative
            uncharacterized protein precursor - Victivallis vadensis
            ATCC BAA-548
          Length = 1190

 Score = 33.1 bits (72), Expect = 3.9
 Identities = 19/65 (29%), Positives = 31/65 (47%)
 Frame = +3

Query: 267  SLRSSVRATARESKYPTGFPSCLWTTATLPVTSEMTASKLLPSARGQSLSGALQTSPGSS 446
            +++S++R     + Y   FP  L +   L   S M  S L+    G+  +G L+ +PG  
Sbjct: 1110 AVKSAIRVENGRTVYELAFPRLLVSPFRLQAGSAMRFSVLVNVNNGKGRAGWLELTPGIG 1169

Query: 447  TRPKL 461
              PKL
Sbjct: 1170 QTPKL 1174


>UniRef50_Q9UVF6 Cluster: pH-response regulator protein palH/RIM21;
           n=1; Yarrowia lipolytica|Rep: pH-response regulator
           protein palH/RIM21 - Yarrowia lipolytica (Candida
           lipolytica)
          Length = 632

 Score = 33.1 bits (72), Expect = 3.9
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = -2

Query: 164 RDLHEVVHTEVGCWGVRIQQVLICVVVWL 78
           ++ +E+ H  +G W  RI QV+ CV+ WL
Sbjct: 181 QNAYELRHKIMGGWAFRILQVITCVITWL 209


>UniRef50_A1W438 Cluster: Putative transmembrane protein; n=3;
           Comamonadaceae|Rep: Putative transmembrane protein -
           Acidovorax sp. (strain JS42)
          Length = 333

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 20/73 (27%), Positives = 36/73 (49%)
 Frame = +3

Query: 297 RESKYPTGFPSCLWTTATLPVTSEMTASKLLPSARGQSLSGALQTSPGSSTRPKLVVAYG 476
           R+S++         T A +PV + M A   L  A G++ S  L++  G ++    ++AYG
Sbjct: 117 RQSQFRHAGLHSFLTNAQVPVQARMRAMAALQYASGRTASPLLRSVLGDASEDLRLLAYG 176

Query: 477 YSDNSDDIQNLSV 515
             DN +   N ++
Sbjct: 177 MLDNLEKRINRAI 189


>UniRef50_UPI00015B8E8E Cluster: UPI00015B8E8E related cluster; n=1;
           unknown|Rep: UPI00015B8E8E UniRef100 entry - unknown
          Length = 69

 Score = 32.3 bits (70), Expect = 6.8
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 147 HLVKIPIGRGLLHHVDYWGEGKVTNL 224
           H + +  G  L  HV YWG+GK+T+L
Sbjct: 13  HEIPMTDGERLQGHVSYWGQGKITSL 38


>UniRef50_Q2SC34 Cluster: Putative uncharacterized protein; n=1;
           Hahella chejuensis KCTC 2396|Rep: Putative
           uncharacterized protein - Hahella chejuensis (strain
           KCTC 2396)
          Length = 1147

 Score = 32.3 bits (70), Expect = 6.8
 Identities = 21/47 (44%), Positives = 25/47 (53%)
 Frame = +3

Query: 345 ATLPVTSEMTASKLLPSARGQSLSGALQTSPGSSTRPKLVVAYGYSD 485
           A+ P  ++ TA  L PSA+    SGA Q  P SS RP  VV  G  D
Sbjct: 830 ASTPKKADKTAQALDPSAK----SGAHQGDPNSSERPSSVVKTGRPD 872


>UniRef50_Q3B4T5 Cluster: Putative uncharacterized protein; n=1;
           Pelodictyon luteolum DSM 273|Rep: Putative
           uncharacterized protein - Pelodictyon luteolum (strain
           DSM 273) (Chlorobium luteolum (strain DSM273))
          Length = 427

 Score = 31.9 bits (69), Expect = 9.0
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +3

Query: 111 YPYSPTPYFGMYHLVKIPIGRGLLHHVDY 197
           YP++  P F +Y+++   IG G+LH V Y
Sbjct: 74  YPFANKPVFWVYYILIFSIGIGILHSVAY 102


>UniRef50_Q2L111 Cluster: Soluble lytic murein transglycosylase;
           n=4; Bordetella|Rep: Soluble lytic murein
           transglycosylase - Bordetella avium (strain 197N)
          Length = 693

 Score = 31.9 bits (69), Expect = 9.0
 Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
 Frame = +3

Query: 333 LWTTATLPVTSEMTASKLLPSARGQSLSGALQT----SPGSSTRPKLVVA 470
           +W  A  PV ++  A++ LPSA    +  ALQT    SP S  R  +V A
Sbjct: 31  MWVAACAPVDAQQRAAEALPSAPAAPVQRALQTGLPASPDSVARQAVVSA 80


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 512,381,646
Number of Sequences: 1657284
Number of extensions: 10733091
Number of successful extensions: 31080
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 29880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31065
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32201017387
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)