Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00577X
         (519 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_03_0010 + 7007694-7007888,7007994-7008059,7008161-7008334,700...    30   0.97 
07_03_0079 + 13169773-13170861                                         29   1.7  
11_03_0128 - 10437407-10438049,10438097-10438272                       29   2.2  
03_03_0008 - 13674602-13674708,13675272-13675439,13676169-136767...    28   3.9  
06_03_0105 + 16693771-16693780,16693833-16693876,16694274-166943...    27   6.8  
11_01_0274 - 2050667-2052115                                           27   9.0  
10_08_0398 - 17588202-17589280,17590154-17590373,17593350-17593595     27   9.0  
05_04_0364 + 20658219-20658416,20658475-20658543                       27   9.0  

>10_03_0010 +
           7007694-7007888,7007994-7008059,7008161-7008334,
           7009232-7009306,7009384-7009510,7012280-7012371,
           7012496-7012566,7012683-7012792,7013016-7013053,
           7013825-7013960,7014382-7014456,7014574-7014697,
           7014917-7015013,7015426-7015451,7016180-7016255,
           7016499-7016636,7016735-7016872
          Length = 585

 Score = 30.3 bits (65), Expect = 0.97
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = +2

Query: 239 LPSKLHVNEQFALVSKG-HSKGKQIPNRIPVVSMDDSDTSSYIRDDSVKTVT 391
           L +K+  N++  L+ K   +KG+++ N   + SM+    S  + DD V+ VT
Sbjct: 491 LSTKVVDNQKDELMKKATKAKGRRVVNSTELTSMNSKTNSDVLNDDIVRKVT 542


>07_03_0079 + 13169773-13170861
          Length = 362

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 18/38 (47%), Positives = 24/38 (63%)
 Frame = -3

Query: 325 GNPVGYLLSLAVALTDERKLFVYM*L*GKPLILPRLVT 212
           GNPVG L+ +A+ LT    L++   L G+P   PRLVT
Sbjct: 154 GNPVGRLVYIALQLTLAWPLYLAFNLSGQP--YPRLVT 189


>11_03_0128 - 10437407-10438049,10438097-10438272
          Length = 272

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
 Frame = +1

Query: 46  HRQRKNGKPPLSQTT-----TQMRTCCIRTPQHPTSVCTTS*RSRLVEGCYTTSITGEKE 210
           HR R+   P  S++T     T  RTCC  TP + TS C T  R          SIT  ++
Sbjct: 121 HRARQRHLPRRSRSTASTSSTTCRTCCRATP-NSTSPCKTGSRCSSSTTARRISITSPRK 179

Query: 211 K 213
           +
Sbjct: 180 R 180


>03_03_0008 - 13674602-13674708,13675272-13675439,13676169-13676787,
            13676868-13677330,13677855-13678036,13678093-13678235,
            13678315-13678423,13679000-13679456,13680490-13682473,
            13682507-13682626,13682920-13682971
          Length = 1467

 Score = 28.3 bits (60), Expect = 3.9
 Identities = 18/54 (33%), Positives = 26/54 (48%)
 Frame = +2

Query: 230  DKRLPSKLHVNEQFALVSKGHSKGKQIPNRIPVVSMDDSDTSSYIRDDSVKTVT 391
            ++ L   L  NE   +   G + G Q+PN I    ++D D SS   D S + VT
Sbjct: 996  ERALNDPLRDNEGMLVDEYGSNAGFQLPNLISTKVLEDEDGSS-SEDRSFEAVT 1048


>06_03_0105 +
           16693771-16693780,16693833-16693876,16694274-16694348,
           16694548-16694784,16694880-16695050,16695137-16695250
          Length = 216

 Score = 27.5 bits (58), Expect = 6.8
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 359 NWKCRCRP*TRRESCWVF 306
           N+ CRCRP  RR   W +
Sbjct: 5   NYVCRCRPENRRNKGWAY 22


>11_01_0274 - 2050667-2052115
          Length = 482

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 17/57 (29%), Positives = 27/57 (47%)
 Frame = +3

Query: 345 ATLPVTSEMTASKLLPSARGQSLSGALQTSPGSSTRPKLVVAYGYSDNSDDIQNLSV 515
           A++  +S M    +  SA  +  S +L  SP   T   ++    +SD  DDI  LS+
Sbjct: 43  ASIDASSVMCTLSIHASAHRRMFS-SLIASPDEETTDGIISYVPFSDGFDDISKLSI 98


>10_08_0398 - 17588202-17589280,17590154-17590373,17593350-17593595
          Length = 514

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +3

Query: 303 SKYPTGFPSCLWTTATLPVTSEMTASKLLPSARGQSLSGALQTSPGSS 446
           S +P  FP         P +S  + SK+LP  R +S S +   SP +S
Sbjct: 200 SPFPKKFPMQPERRTAFPQSSHSSYSKILPLFRPKSNSRSRPESPAAS 247


>05_04_0364 + 20658219-20658416,20658475-20658543
          Length = 88

 Score = 27.1 bits (57), Expect = 9.0
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +3

Query: 339 TTATLPVTSEMTASKLLPSARGQSLSGALQTSPGSSTRP 455
           +T  LPV      +++  SAR   L   L   PG S RP
Sbjct: 12  STCRLPVMKSRHPTRIAQSARPTQLPETLTLQPGRSGRP 50


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,150,945
Number of Sequences: 37544
Number of extensions: 311429
Number of successful extensions: 770
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 770
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1130733700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)