Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00576
(751 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 83 2e-16
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 70 2e-12
SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 61 1e-09
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 57 1e-08
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 56 2e-08
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 49 5e-06
SB_52320| Best HMM Match : DEAD (HMM E-Value=0) 46 4e-05
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 45 8e-05
SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19) 44 1e-04
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 40 0.002
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 39 0.004
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 38 0.007
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.011
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.035
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 36 0.046
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 36 0.046
SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069) 35 0.081
SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057) 34 0.11
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 34 0.14
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 34 0.14
SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.14
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 31 1.00
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 31 1.00
SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07) 31 1.3
SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0) 30 1.7
SB_3046| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_6554| Best HMM Match : Isy1 (HMM E-Value=0) 29 4.0
SB_51035| Best HMM Match : Extensin_2 (HMM E-Value=0.33) 28 9.3
SB_29635| Best HMM Match : E-MAP-115 (HMM E-Value=1.2) 28 9.3
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 83.0 bits (196), Expect = 2e-16
Identities = 41/79 (51%), Positives = 53/79 (67%)
Frame = +1
Query: 511 VPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQPSCCRFWDTHLM 690
+ KTGSGKT A++ PA+VHI +QP ++ GDGPI L+ APTREL QQI RF + +
Sbjct: 560 IAKTGSGKTAAFLWPALVHIMDQPELQVGDGPIVLICAPTRELCQQIYTEARRFGKAYNI 619
Query: 691 FVTRVCFGGAPKREQARGL 747
V V FGG K EQ++ L
Sbjct: 620 HVVAV-FGGGNKYEQSKAL 637
Score = 76.6 bits (180), Expect = 2e-14
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Frame = +2
Query: 257 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 436
+PFNKNFY+ HP + K+S E+++ R K + VSG P F F + + ++
Sbjct: 475 KPFNKNFYEEHPEITKQSKQEIDDLRKKMGIKVSGAMPARPCISFAHFGFDEQMMASIRK 534
Query: 437 MGYKEPTPIQAQGWPIAMSGKNLVAYPK----RVPAKRWP 544
+ Y +PT IQ Q PIA+SG++++ K + A WP
Sbjct: 535 LEYTQPTQIQCQALPIALSGRDIIGIAKTGSGKTAAFLWP 574
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 70.1 bits (164), Expect = 2e-12
Identities = 36/68 (52%), Positives = 43/68 (63%)
Frame = +1
Query: 544 YILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQPSCCRFWDTHLMFVTRVCFGGAP 723
+ILP IVHIN+QP ++ GDGPI LVL PTRELAQQ+Q H + +GGAP
Sbjct: 113 FILPGIVHINHQPLLQPGDGPIVLVLCPTRELAQQVQEVAYSV-GKHCKLRSTCIYGGAP 171
Query: 724 KREQARGL 747
K Q R L
Sbjct: 172 KGPQIREL 179
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/56 (48%), Positives = 36/56 (64%)
Frame = +2
Query: 305 RSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQ 472
R +EV+ YR ++TV+G V P+ FEE+ FPDY+Q K G+ EPT IQAQ
Sbjct: 57 RGQHEVDAYRRSKDLTVNGRNVPKPVTTFEESAFPDYIQSYFKREGFTEPTMIQAQ 112
>SB_3952| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 592
Score = 63.3 bits (147), Expect = 2e-10
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 4/107 (3%)
Frame = +2
Query: 257 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPDYVQQGVK 433
QPF K+FY P + K +P E +E+R E + V G P++ + + + +K
Sbjct: 62 QPFRKDFYVEVPELAKMTPEETDEFRLSLENIHVRGKNAPKPVKTWAQTGVQLKILDVLK 121
Query: 434 TMGYKEPTPIQAQGWPIAMSGKNLVAY---PKRVPAKRWPTSCQPLC 565
Y++PTPIQAQ P+ MSG++++A P R A + C+ C
Sbjct: 122 KNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELAIQIHRECKKFC 168
Score = 35.5 bits (78), Expect = 0.046
Identities = 24/68 (35%), Positives = 32/68 (47%)
Frame = +1
Query: 532 KTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQPSCCRFWDTHLMFVTRVCF 711
K +Y P + P I G IA+V+ PTRELA QI C +F + + V +
Sbjct: 121 KKNSYEKPTPIQAQAIPVIMSGRDMIAIVMTPTRELAIQIHRECKKFCKPNNLRCVCV-Y 179
Query: 712 GGAPKREQ 735
GG EQ
Sbjct: 180 GGTGISEQ 187
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/91 (30%), Positives = 49/91 (53%)
Frame = +2
Query: 278 YDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPT 457
Y HPT+ + +V++ R+K E+ V G V +P+ F +F + + + + GY PT
Sbjct: 161 YKEHPTIAALTAEQVKQLRDKMEIKVKGEHVVSPVLEFFHCSFNESLSKNLSNHGYHSPT 220
Query: 458 PIQAQGWPIAMSGKNLVAYPKRVPAKRWPTS 550
PIQ Q P+ +SG++++ K P+S
Sbjct: 221 PIQMQVLPVLLSGRDVMVCASTGSGKLLPSS 251
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 57.2 bits (132), Expect = 1e-08
Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 4/58 (6%)
Frame = +1
Query: 511 VPKTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQPSCCRF 672
V +TGSGKT A+ +P +V I P I R + GP AL+LAPTRELAQQI+ +F
Sbjct: 144 VAETGSGKTAAFAIPLLVWIMGLPKIERDNDADQGPYALILAPTRELAQQIEEEILKF 201
Score = 50.8 bits (116), Expect = 1e-06
Identities = 20/60 (33%), Positives = 36/60 (60%)
Frame = +2
Query: 329 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
+R ++ G + PI+ ++EA PD + + V +GYK+PTPIQ Q PI + ++++
Sbjct: 83 FREDFNISTKGGRIPFPIRKWKEAQIPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDII 142
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 56.4 bits (130), Expect = 2e-08
Identities = 33/84 (39%), Positives = 44/84 (52%)
Frame = +1
Query: 496 KEFSCVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQPSCCRFW 675
++ +TGSGKT AY+LP + + Q P+AL +APTRELA+QI +F
Sbjct: 517 RDLMACAQTGSGKTAAYMLPVLTSLIKQGLNAPPRSPLALCVAPTRELAKQIYIEARKFS 576
Query: 676 DTHLMFVTRVCFGGAPKREQARGL 747
D H VC+GG QA L
Sbjct: 577 D-HTPIKVCVCYGGVSVPYQASQL 599
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +2
Query: 353 VSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
VSG I F E F + + + GY+ PTP+Q PI M+G++L+A
Sbjct: 469 VSGENQPPKITSFNELPFGEQLMANISRAGYRRPTPVQKAALPIVMAGRDLMA 521
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 56.4 bits (130), Expect = 2e-08
Identities = 25/45 (55%), Positives = 32/45 (71%)
Frame = +1
Query: 517 KTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 651
+TGSGKTLAY LP + + + P GD P+AL+L PTREL QQ+
Sbjct: 117 ETGSGKTLAYSLPLCMLLRTKAPSNPGDTPVALILTPTRELMQQV 161
Score = 52.4 bits (120), Expect = 4e-07
Identities = 29/101 (28%), Positives = 49/101 (48%)
Frame = +2
Query: 263 FNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 442
F ++YD + V + S V+E R K+ + + G + PI+ F + N P + +
Sbjct: 32 FMWSYYDENEKVSRLSDEVVDEIRWKNGIHIEGEDCPKPIESFHDLNLPPELSTYLAKKN 91
Query: 443 YKEPTPIQAQGWPIAMSGKNLVAYPKRVPAKRWPTSCQPLC 565
++ PTPIQ Q MSG++++ + K S PLC
Sbjct: 92 FQVPTPIQMQSLSCVMSGRDIIGLAETGSGKTLAYSL-PLC 131
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 48.8 bits (111), Expect = 5e-06
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 4/64 (6%)
Frame = +2
Query: 317 EVEEYRNKHEVTVSGVEVHNPIQYF----EEANFPDYVQQGVKTMGYKEPTPIQAQGWPI 484
++ +R++ + V G +V +P++ F E FPDY+ V+ GY PTPIQ Q P+
Sbjct: 137 KINLFRHEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTPTPIQMQATPL 196
Query: 485 AMSG 496
G
Sbjct: 197 MAHG 200
Score = 29.5 bits (63), Expect = 3.0
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = +1
Query: 544 YILPAIVHINNQPPIRRG---DGPIALVLAPTRELAQQIQPSCC 666
Y P + + P + G G A+V++PTRELAQQI C
Sbjct: 183 YTTPTPIQMQATPLMAHGPKKSGFRAVVVSPTRELAQQIYREFC 226
>SB_52320| Best HMM Match : DEAD (HMM E-Value=0)
Length = 340
Score = 45.6 bits (103), Expect = 4e-05
Identities = 30/75 (40%), Positives = 40/75 (53%)
Frame = +1
Query: 517 KTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQPSCCRFWDTHLMFV 696
KTGSGKTLA+++P I + Q DG ALV++PTRELA Q + + H +
Sbjct: 95 KTGSGKTLAFLIPIIETLWRQKWTSM-DGLGALVISPTRELAYQTFEVLVKIGNKHDLSA 153
Query: 697 TRVCFGGAPKREQAR 741
+ G K EQ R
Sbjct: 154 GLIIGGKDLKNEQKR 168
Score = 32.7 bits (71), Expect = 0.33
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 380 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVAYPK 520
++ F + G+ G+ PT IQ QG P+A+SG++++ K
Sbjct: 49 VEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAK 95
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 45.6 bits (103), Expect = 4e-05
Identities = 31/82 (37%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Frame = +1
Query: 517 KTGSGKTLAYILPAIVHINN----QPPIRRGDGPIALVLAPTRELAQQIQPSCCRFWDTH 684
+TGSGKT A++LP + + N P A+ +APTRELA QI +F H
Sbjct: 756 QTGSGKTAAFLLPVMTSMMNAGLTSSSFSETQTPQAMCIAPTRELANQIYLEARKF--AH 813
Query: 685 -LMFVTRVCFGGAPKREQARGL 747
M VC+GG Q R L
Sbjct: 814 GTMLRPVVCYGGVSVSHQLRQL 835
Score = 44.4 bits (100), Expect = 1e-04
Identities = 24/63 (38%), Positives = 37/63 (58%)
Frame = +2
Query: 323 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 502
E+Y ++ EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++
Sbjct: 692 EKY-DQIEVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRD 750
Query: 503 LVA 511
++A
Sbjct: 751 VMA 753
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 44.8 bits (101), Expect = 8e-05
Identities = 21/46 (45%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Frame = +1
Query: 517 KTGSGKTLAYILPAIVHINN-QPPIRRGDGPIALVLAPTRELAQQI 651
+TG+GKTL++ LP + + + + +RG P LV+APTRELA+Q+
Sbjct: 118 RTGTGKTLSFALPLVEKLQDGKLSQKRGRAPKVLVMAPTRELAKQV 163
>SB_5994| Best HMM Match : zf-CCHC (HMM E-Value=2.2e-19)
Length = 185
Score = 44.4 bits (100), Expect = 1e-04
Identities = 24/63 (38%), Positives = 37/63 (58%)
Frame = +2
Query: 323 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 502
E+Y ++ EV VSG I FEEAN + V+ YK+PTP+Q PI ++G++
Sbjct: 115 EKY-DQIEVLVSGNNPVRHINSFEEANLYEAFLNNVRKAQYKKPTPVQKYSIPIVIAGRD 173
Query: 503 LVA 511
++A
Sbjct: 174 VMA 176
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 44.0 bits (99), Expect = 1e-04
Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +1
Query: 517 KTGSGKTLAYILPAIVHINNQPPIRRG-DGPIALVLAPTRELAQQIQPSCCRFWDTHLMF 693
++G+GKT + + + I+ + G D ALVLAPTRELAQQIQ D ++
Sbjct: 130 QSGTGKTATFAISILQEIDTNYKDKNGCDCCQALVLAPTRELAQQIQKVVLALGD-YMHV 188
Query: 694 VTRVCFGGAPKRE 732
C GG RE
Sbjct: 189 KCHACIGGTNVRE 201
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 42.7 bits (96), Expect = 3e-04
Identities = 29/106 (27%), Positives = 49/106 (46%)
Frame = +1
Query: 430 KDNGLQRTDAHSSSRLADSYVWKEFSCVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPI 609
KD G +A ++ KTGSGKTLA+++P +V + + + +G
Sbjct: 588 KDMGFTTMTEIQHKSIAPLLKGRDLLGAAKTGSGKTLAFLVP-VVELLYKLQFKTRNGTG 646
Query: 610 ALVLAPTRELAQQIQPSCCRFWDTHLMFVTRVCFGGAPKREQARGL 747
++++PTREL+ Q R H F + GG ++ +A L
Sbjct: 647 VIIISPTRELSLQTY-GVARDLLKHHNFTYGIIMGGVNRKAEAERL 691
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 40.3 bits (90), Expect = 0.002
Identities = 24/53 (45%), Positives = 30/53 (56%), Gaps = 5/53 (9%)
Frame = +1
Query: 508 CVPKTGSGKTLAYILPAIVHINNQPPIRRG-----DGPIALVLAPTRELAQQI 651
C +TGSGKTLAY+ P +VH + R G P A ++ P RELA QI
Sbjct: 420 CAAQTGSGKTLAYLAP-LVHRLREDEERHGILARLKRPRACIVVPARELATQI 471
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 39.9 bits (89), Expect = 0.002
Identities = 28/77 (36%), Positives = 39/77 (50%)
Frame = +1
Query: 517 KTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQPSCCRFWDTHLMFV 696
++G+GKT + + + I+ Q +R P ALVL+PTRELA QIQ D ++
Sbjct: 42 QSGTGKTATFSISVLQAIDTQ--LRE---PQALVLSPTRELANQIQKVVLALGD-YMSVQ 95
Query: 697 TRVCFGGAPKREQARGL 747
C GG E R L
Sbjct: 96 CHACIGGTNIGEDIRKL 112
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 39.1 bits (87), Expect = 0.004
Identities = 23/45 (51%), Positives = 28/45 (62%)
Frame = +1
Query: 517 KTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 651
KTGSGKT A+ LP + + + P G A+VL PTRELA QI
Sbjct: 52 KTGSGKTAAFALPILQKLCDDP-----YGIFAVVLTPTRELAFQI 91
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 38.3 bits (85), Expect = 0.007
Identities = 23/56 (41%), Positives = 31/56 (55%)
Frame = +1
Query: 496 KEFSCVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQPSC 663
K+ + +TGSGKT A+ LP + + + P AL+L PTRELA QI C
Sbjct: 2 KDVIGLAETGSGKTGAFALPILQALLDNP-----QRLFALILTPTRELAFQISEQC 52
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 37.5 bits (83), Expect = 0.011
Identities = 21/53 (39%), Positives = 30/53 (56%)
Frame = +1
Query: 496 KEFSCVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQ 654
K+ + +TGSGKT A+++P + G AL+L+PTRELA Q Q
Sbjct: 319 KDVVAMARTGSGKTAAFLIPMFEKLQTH---TAKVGIRALILSPTRELALQTQ 368
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 35.9 bits (79), Expect = 0.035
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 15/88 (17%)
Frame = +1
Query: 517 KTGSGKTLAYILPAIVHIN-------NQPPI-------RRGDGPIALVLAPTRELAQQIQ 654
+TGSGKTLA+ +P I HI Q P +G +AL++APTRELA Q++
Sbjct: 176 ETGSGKTLAFGIPIIQHIEAYKKRKAEQSPSDKESDLESQGYPLLALIMAPTRELALQVK 235
Query: 655 PSCCRFWDTHLMFVTRVCFG-GAPKREQ 735
+ + V + G APK+++
Sbjct: 236 DHLVKAAKYTSVKVAAIVGGMAAPKQQR 263
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 35.5 bits (78), Expect = 0.046
Identities = 25/78 (32%), Positives = 35/78 (44%)
Frame = +1
Query: 517 KTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQPSCCRFWDTHLMFV 696
K G+GKT AY++P + + + ALVL PTRELA Q C H+
Sbjct: 92 KNGTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQTSQICIEL-GKHMGAQ 145
Query: 697 TRVCFGGAPKREQARGLW 750
V GG ++ L+
Sbjct: 146 VMVTTGGTSLKDDILRLY 163
Score = 33.5 bits (73), Expect = 0.19
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVAYPKRVPAK 535
FE+ + G+ G+ +P+PIQ + P+A++G++++A K K
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGK 97
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 35.5 bits (78), Expect = 0.046
Identities = 25/78 (32%), Positives = 35/78 (44%)
Frame = +1
Query: 517 KTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQPSCCRFWDTHLMFV 696
K G+GKT AY++P + + + ALVL PTRELA Q C H+
Sbjct: 92 KNGTGKTAAYLVPLLERTDTTKNCIQ-----ALVLVPTRELALQTSQICIEL-GKHMGAQ 145
Query: 697 TRVCFGGAPKREQARGLW 750
V GG ++ L+
Sbjct: 146 VMVTTGGTSLKDDILRLY 163
Score = 33.5 bits (73), Expect = 0.19
Identities = 14/49 (28%), Positives = 28/49 (57%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVAYPKRVPAK 535
FE+ + G+ G+ +P+PIQ + P+A++G++++A K K
Sbjct: 49 FEDYCLKRELLMGIFEKGFDKPSPIQEESIPVALAGRDILARAKNGTGK 97
>SB_45527| Best HMM Match : DEAD (HMM E-Value=0.0069)
Length = 120
Score = 34.7 bits (76), Expect = 0.081
Identities = 21/48 (43%), Positives = 24/48 (50%)
Frame = +1
Query: 604 PIALVLAPTRELAQQIQPSCCRFWDTHLMFVTRVCFGGAPKREQARGL 747
P ALVL+PTRELA QIQ D ++ C GG E R L
Sbjct: 4 PQALVLSPTRELANQIQKVVLALGD-YMSVQCHACIGGTNIGEDIRKL 50
>SB_51015| Best HMM Match : DEAD (HMM E-Value=0.0057)
Length = 96
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +1
Query: 466 SSRLADSYVWKEFSCVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQ 645
+S + + + K+ TG+GKT A++LP + + +P + LV+ PTRELA
Sbjct: 38 ASTIPVALMGKDVCACAATGTGKTAAFMLPILERLLYRP--TQSPAIRVLVITPTRELAI 95
Query: 646 Q 648
Q
Sbjct: 96 Q 96
Score = 32.7 bits (71), Expect = 0.33
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 422 QGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
+ V +G+ PTPIQA P+A+ GK++ A
Sbjct: 23 RAVNELGFLHPTPIQASTIPVALMGKDVCA 52
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 33.9 bits (74), Expect = 0.14
Identities = 24/76 (31%), Positives = 38/76 (50%)
Frame = +1
Query: 424 RCKDNGLQRTDAHSSSRLADSYVWKEFSCVPKTGSGKTLAYILPAIVHINNQPPIRRGDG 603
+ K G+ + L + K +TG+GK+L ++LP++ Q P RG G
Sbjct: 174 KLKKMGITKPVPIQEKALPSVFSHKSLLIKSETGTGKSLVFLLPSV-----QDP-GRGYG 227
Query: 604 PIALVLAPTRELAQQI 651
I ++ PTRELA Q+
Sbjct: 228 TI--IVVPTRELASQM 241
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 380 IQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
I FE+ + + + V GYK+PTP+Q PI ++L+A
Sbjct: 874 ILQFEDVDLGEILLHNVGLAGYKKPTPVQKYAIPIVKGKRDLMA 917
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 33.9 bits (74), Expect = 0.14
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Frame = +1
Query: 433 DNGLQRTDAHSSSRLADSYVWKEFSCVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIA 612
D G + + + + + C K+G GKT ++L + + P+ DG ++
Sbjct: 64 DCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLATLQQLE---PV---DGQVS 117
Query: 613 -LVLAPTRELAQQIQPSCCRFWDTHLMFVTRVCFGG 717
LV+ TRELA QI RF V FGG
Sbjct: 118 VLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGG 153
>SB_28853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 208
Score = 33.9 bits (74), Expect = 0.14
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 1/96 (1%)
Frame = +1
Query: 433 DNGLQRTDAHSSSRLADSYVWKEFSCVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIA 612
D G + + + + + C K+G GKT ++L + + P+ DG ++
Sbjct: 64 DCGFEHPSEVQHECIPQAILGMDIICQAKSGMGKTAVFVLATLQQLE---PV---DGQVS 117
Query: 613 -LVLAPTRELAQQIQPSCCRFWDTHLMFVTRVCFGG 717
LV+ TRELA QI RF V FGG
Sbjct: 118 VLVMCHTRELAFQIHKEYERFCKYMSNIKIAVFFGG 153
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 31.1 bits (67), Expect = 1.00
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +2
Query: 338 KHEVTVSGVEVHNPI---QYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMS 493
KHEV V + +P+ + FEE +++GV MG+ +P+ IQ P+ ++
Sbjct: 85 KHEVEVLRSDPSSPLYSAKSFEELPLSANLRRGVYDMGFNKPSKIQETALPMLLA 139
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 31.1 bits (67), Expect = 1.00
Identities = 20/77 (25%), Positives = 36/77 (46%)
Frame = +1
Query: 517 KTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQPSCCRFWDTHLMFV 696
K+G+GKT + + A+ ++ I + ++L PTRE+A Q++ C +
Sbjct: 58 KSGTGKTCVFSVIALENV-----ITESNCIQIIILTPTREIAVQVKDVICAIGCHYDGLA 112
Query: 697 TRVCFGGAPKREQARGL 747
+V GG E + L
Sbjct: 113 CKVFIGGISLEEDKKAL 129
>SB_49218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 480
Score = 30.7 bits (66), Expect = 1.3
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +2
Query: 365 EVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGW 478
++H P++ + FP Y + Y P P QA W
Sbjct: 6 DIHGPVRKLHKHGFPGYEEDYAAVFKYPTPWPEQAMEW 43
>SB_40196| Best HMM Match : DEAD (HMM E-Value=3.5e-07)
Length = 456
Score = 30.7 bits (66), Expect = 1.3
Identities = 19/74 (25%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +1
Query: 523 GSGKTLAYILPAIVHINNQPPIRR---GDGPIALVLAPTRELAQQIQPSCCRFWDTHLMF 693
GSGK LAY+LP I I + +GP+ L+L + ++ C
Sbjct: 234 GSGKRLAYLLPIIHQITESSVYQELPLANGPLVLILCTNWQNTARVYGVCEDLIRNRRRT 293
Query: 694 VTRVCFGGAPKREQ 735
++ FGG + ++
Sbjct: 294 RVQMIFGGGAEEDR 307
>SB_52637| Best HMM Match : Cpn60_TCP1 (HMM E-Value=0)
Length = 505
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +2
Query: 311 PYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMG 442
P+E + + KH++ V+ VE + +Q +E F + ++Q VK G
Sbjct: 252 PFEPPKPKTKHKLDVATVEDYKKLQEYEREKFTEMIKQ-VKDTG 294
>SB_3046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 734
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -2
Query: 195 HQSLQILQIYCHRCQTETNYRRICCLLQIWNHRFHGY 85
H L YC RC T CCLLQ++++ ++G+
Sbjct: 484 HLQQPSLAAYC-RCITILTTAIACCLLQVYHNTYNGH 519
>SB_6554| Best HMM Match : Isy1 (HMM E-Value=0)
Length = 675
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Frame = +2
Query: 323 EEYRNK-HEVTVSGVEVHNPIQYFEEANFPDY 415
EE NK H++ + + +HNP YFE+ + DY
Sbjct: 234 EEVNNKLHKILIVNM-IHNPFNYFEKKSPTDY 264
>SB_51035| Best HMM Match : Extensin_2 (HMM E-Value=0.33)
Length = 321
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = +2
Query: 440 GYKEPTPIQAQGWPIAMSGKNLVAYPKRVPAKRWPTSCQPLC 565
G P+ G P+ SG P + A P+SCQP C
Sbjct: 152 GPASPSFGSVYGAPVQFSGMPSQCAPSCMAASPCPSSCQPTC 193
>SB_29635| Best HMM Match : E-MAP-115 (HMM E-Value=1.2)
Length = 2658
Score = 27.9 bits (59), Expect = 9.3
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 746 SPRACSLLGAPPKHTRVTNIRCVSQNLQQ 660
SPR SL G+PP++ + + QNLQQ
Sbjct: 628 SPRVQSLAGSPPENDTRALLSILYQNLQQ 656
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,544,045
Number of Sequences: 59808
Number of extensions: 523084
Number of successful extensions: 1397
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1380
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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