Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00576
         (751 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    43   1e-05
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    25   1.9  
AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein pr...    25   2.5  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    25   3.3  
AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.      24   5.8  
AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.    24   5.8  
AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.         23   7.6  
AF043440-1|AAC05665.1|  234|Anopheles gambiae putative pupal-spe...    23   7.6  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 42.7 bits (96), Expect = 1e-05
 Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
 Frame = +1

Query: 496 KEFSCVPKTGSGKTLAYILPAIVH-INNQPPIR-RGDGPIALVLAPTRELAQQIQPSCCR 669
           ++     +TGSGKT A++LP I H ++ +  +  R   P  +++APTRELA QI     +
Sbjct: 212 RDLMACAQTGSGKTAAFMLPMIHHLLDKEDSLELRTRNPYIVIVAPTRELAIQIHDEGRK 271

Query: 670 FWDTHLMFVTRVCFGGAPKREQ 735
           F     + V  V +GG   + Q
Sbjct: 272 FAHGTKLKVC-VSYGGTAVQHQ 292



 Score = 41.5 bits (93), Expect = 3e-05
 Identities = 19/56 (33%), Positives = 32/56 (57%)
 Frame = +2

Query: 344 EVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
           +V VSG    + ++ FE +   + V   V+   Y +PTPIQ    PI ++G++L+A
Sbjct: 161 QVRVSGENPPDHVESFERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMA 216


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 15/47 (31%), Positives = 22/47 (46%)
 Frame = -3

Query: 146 RRIIAEFVASSKFGTTVSTAIIPITRHDYFSDLVEDVYLNYGFFLTQ 6
           RR+ A+  A ++F          I+   YF D+V DV L Y  +  Q
Sbjct: 59  RRVRAKSKAMTEFLPLCDVLFNVISLAGYFCDVVFDVVLGYALYERQ 105


>AF387862-1|AAL56547.1|  476|Anopheles gambiae gag polyprotein
           protein.
          Length = 476

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 6/38 (15%)
 Frame = -2

Query: 219 ALQRILFSHQSLQILQ------IYCHRCQTETNYRRIC 124
           A +R+  SHQS  IL+      I CHRC+   + +R C
Sbjct: 180 AQKRMEKSHQSESILRVGPEKKITCHRCRKPGHMKRDC 217


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -2

Query: 270 LLKGWMKQNPNLGVACSALQRI 205
           LL G MK +P+LG AC  +  +
Sbjct: 406 LLVGRMKVDPDLGAACGRIHPV 427


>AY534995-1|AAT07393.1|  461|Anopheles gambiae XK-related protein.
          Length = 461

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = +1

Query: 649 IQPSCCRFWDTHLMFVTRVCFGGAPKREQA 738
           + P CCR+W  H + ++  C+    +++ A
Sbjct: 183 VVPFCCRYW--HSLRLSYACYRAKHRQDWA 210


>AJ302655-1|CAC35520.1|  332|Anopheles gambiae gSG5 protein protein.
          Length = 332

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 11/43 (25%), Positives = 23/43 (53%)
 Frame = +3

Query: 219 QNMRRPDWDSVSSNLSTKTFMIHILQFSKDHHMKSKSIEINTR 347
           QN+ RP+   +   L+T  F +++ Q  +  H++   + I +R
Sbjct: 94  QNISRPNLGELFQKLTTGFFSLNLFQIGQ--HVRGVLVSIKSR 134


>AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.
          Length = 304

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = -2

Query: 108 WNHRFHGYYSNY 73
           W  R HGYY+NY
Sbjct: 197 WIIRPHGYYANY 208


>AF043440-1|AAC05665.1|  234|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2d protein.
          Length = 234

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +2

Query: 296 VLKRSPYEVEEYRNKHEVTVSGVEVHNPIQY 388
           V++R P  V+  +  H+V    V VH P+ +
Sbjct: 139 VVRREPSAVKIAQPVHKVIAQPVHVHAPVAH 169


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 789,376
Number of Sequences: 2352
Number of extensions: 17486
Number of successful extensions: 39
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)