Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00576
(751 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 83 3e-16
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 75 7e-14
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 70 2e-12
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 60 1e-09
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 55 5e-08
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 51 8e-07
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 47 1e-05
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 47 1e-05
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 47 1e-05
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 46 3e-05
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 44 9e-05
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 42 4e-04
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 42 4e-04
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 40 5e-04
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 42 6e-04
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 41 0.001
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 40 0.001
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 40 0.001
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 40 0.001
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 40 0.001
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 40 0.001
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 40 0.001
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 40 0.001
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 40 0.001
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 40 0.001
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 40 0.002
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 39 0.004
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 38 0.006
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 38 0.006
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 37 0.013
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 37 0.013
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 37 0.013
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 36 0.023
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 36 0.023
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 36 0.023
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 36 0.041
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 36 0.041
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 34 0.094
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 33 0.29
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 33 0.29
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 32 0.50
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 32 0.50
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 32 0.50
AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical ... 30 2.0
Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical p... 29 2.7
Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical pr... 29 3.5
AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine r... 29 3.5
AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine r... 29 3.5
U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation fact... 29 4.7
U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation fact... 29 4.7
U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation fact... 29 4.7
U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation fact... 29 4.7
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical pr... 28 8.1
U00048-6|AAB53828.1| 873|Caenorhabditis elegans Hypothetical pr... 28 8.1
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 28 8.1
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 28 8.1
AF016427-5|AAB65357.2| 273|Caenorhabditis elegans Ground-like (... 28 8.1
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 82.6 bits (195), Expect = 3e-16
Identities = 44/85 (51%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = +1
Query: 496 KEFSCVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQPSCCRFW 675
++ + KTGSGKTLA++LPA+VHI Q +RG+GP LVL PTRELAQQ+Q F
Sbjct: 167 RDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDF- 225
Query: 676 DTHLMFVTRVC-FGGAPKREQARGL 747
H + + C FGGA K QAR L
Sbjct: 226 -CHSLGLKMTCLFGGASKGPQARDL 249
Score = 64.9 bits (151), Expect = 6e-11
Identities = 29/89 (32%), Positives = 54/89 (60%)
Frame = +2
Query: 254 IQPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVK 433
+ P K+FY + V +R YE++++ + ++VT+ G V P+ F EA P + + +
Sbjct: 87 LTPIEKDFYHENAAVSRREQYEIDQWVSANQVTLEGRGVPRPVFEFNEAPLPGQIHE-LL 145
Query: 434 TMGYKEPTPIQAQGWPIAMSGKNLVAYPK 520
+++PT IQ+ WPIAMSG+++++ K
Sbjct: 146 YGKFQKPTVIQSISWPIAMSGRDIISIAK 174
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 74.5 bits (175), Expect = 7e-14
Identities = 36/80 (45%), Positives = 53/80 (66%), Gaps = 1/80 (1%)
Frame = +1
Query: 511 VPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQPSCCRFWDTHLM 690
+ KTGSGKT AY+ PAIVHI +QP ++ G+GP+A+++ PTRELA Q+ +F +
Sbjct: 308 IAKTGSGKTAAYLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFCKVY-- 365
Query: 691 FVTRVC-FGGAPKREQARGL 747
+ +C +GG K EQ+ L
Sbjct: 366 NINPICAYGGGSKWEQSNEL 385
Score = 61.7 bits (143), Expect = 5e-10
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Frame = +2
Query: 257 QPFNKNFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKT 436
Q FNKNFY+ H + + +V +N + V G++ P+ F +F + + ++
Sbjct: 223 QKFNKNFYEEHEDIKRLHYMDVIRLQNTMNLRVGGLKPPRPVCSFAHFSFDKLLMEAIRK 282
Query: 437 MGYKEPTPIQAQGWPIAMSGKNLVAYPK----RVPAKRWP 544
Y++PTPIQA P A+SG++++ K + A WP
Sbjct: 283 SEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWP 322
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 69.7 bits (163), Expect = 2e-12
Identities = 31/54 (57%), Positives = 39/54 (72%)
Frame = +1
Query: 511 VPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQPSCCRF 672
+ KTGSGKTLA++LP HI +QP + GDGPIA++LAPTRELA Q +F
Sbjct: 347 IAKTGSGKTLAFLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKF 400
Score = 52.8 bits (121), Expect = 2e-07
Identities = 27/91 (29%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Frame = +2
Query: 251 FIQPFNKNFYDPHPTVLKRSPYEVEEYRNKHE-VTVSGVEVHNPIQYFEEANFPDYVQQG 427
+ + F KNFY + + + EV+ YR + + +TV G++ PI+ + + +
Sbjct: 259 YYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKPIKTWAQCGVNLKMMNV 318
Query: 428 VKTMGYKEPTPIQAQGWPIAMSGKNLVAYPK 520
+K Y +PT IQAQ P MSG++++ K
Sbjct: 319 LKKFEYSKPTSIQAQAIPSIMSGRDVIGIAK 349
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 60.5 bits (140), Expect = 1e-09
Identities = 25/60 (41%), Positives = 38/60 (63%)
Frame = +2
Query: 329 YRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLV 508
+R +++ G V P++ +EEA FPD V Q VK +GY EPTPIQ Q PI + ++++
Sbjct: 283 FREDFNISIKGGRVPRPLRNWEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVI 342
Score = 60.1 bits (139), Expect = 2e-09
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Frame = +1
Query: 511 VPKTGSGKTLAYILPAIVHINNQPPIRRGD----GPIALVLAPTRELAQQIQPSCCRFWD 678
V +TGSGKT A++LP +V I + P + R + GP A+++APTRELAQQI+ +F
Sbjct: 344 VAETGSGKTAAFLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGK 403
Query: 679 THLMFVTRVCFGGAPKREQARGL 747
L T GGA + +Q L
Sbjct: 404 L-LGIKTVSVIGGASREDQGMKL 425
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 55.2 bits (127), Expect = 5e-08
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 6/81 (7%)
Frame = +1
Query: 511 VPKTGSGKTLAYILPAIVHINNQ-PPIRRGD-----GPIALVLAPTRELAQQIQPSCCRF 672
V +TGSGKTLA++LPA++HI+ Q + D P LVL+PTRELAQQI+ ++
Sbjct: 127 VSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKY 186
Query: 673 WDTHLMFVTRVCFGGAPKREQ 735
++ + + +GG + EQ
Sbjct: 187 --SYNGYKSVCLYGGGSRPEQ 205
Score = 41.1 bits (92), Expect = 8e-04
Identities = 26/96 (27%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Frame = +2
Query: 245 FCFIQPFNKNFYDPHPTVLKRSPYEVEE-YRNKHEVTV------SGVEVHNPIQYFEEAN 403
F +++P ++ Y SP +++E Y N + V S V++ P+ FE+A
Sbjct: 30 FSWMKPIVRDLYKIPNEQKNLSPEQLQELYTNGGVMKVYPFREESTVKIPPPVNSFEQAF 89
Query: 404 FPDYVQQG-VKTMGYKEPTPIQAQGWPIAMSGKNLV 508
+ G ++ G+++P+PIQ+Q WP+ +SG++ +
Sbjct: 90 GSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCI 125
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 51.2 bits (117), Expect = 8e-07
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Frame = +1
Query: 511 VPKTGSGKTLAYILPAIVHINNQP---PIRRGDGPIALVLAPTRELAQQIQPSCCRFWDT 681
+ TGSGKT+ ++LP ++ Q P R +GP L++ P+RELA+QI +D
Sbjct: 233 IASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPFGLIIVPSRELARQIFDLIIEMFDA 292
Query: 682 -----HLMFVTRVCFGGAPKREQAR 741
+C GG P EQA+
Sbjct: 293 LGKAGLPEMRAGLCIGGVPIGEQAK 317
Score = 41.5 bits (93), Expect = 6e-04
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +2
Query: 284 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGV-KTMGYKEPTP 460
P + ++S + E R + ++ G + PI F E FP + + + K G PT
Sbjct: 156 PPGHIRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEMKFPKSLLEFMQKQKGIVTPTA 215
Query: 461 IQAQGWPIAMSGKNLV 508
IQ QG P+A+SG++++
Sbjct: 216 IQIQGIPVALSGRDMI 231
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 47.2 bits (107), Expect = 1e-05
Identities = 38/93 (40%), Positives = 51/93 (54%), Gaps = 12/93 (12%)
Frame = +1
Query: 505 SCVPKTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQQIQ 654
SC +TGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI
Sbjct: 181 SCA-QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIH 239
Query: 655 PSCCRF-WDTHLMFVTRVCFGGAPK-REQARGL 747
+F + +++ T + +GG R+Q L
Sbjct: 240 KEATKFSYKSNIQ--TAILYGGRENYRDQVNRL 270
Score = 44.4 bits (100), Expect = 9e-05
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +2
Query: 323 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 502
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 120 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 178
Query: 503 LVA 511
L++
Sbjct: 179 LMS 181
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 47.2 bits (107), Expect = 1e-05
Identities = 38/93 (40%), Positives = 51/93 (54%), Gaps = 12/93 (12%)
Frame = +1
Query: 505 SCVPKTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQQIQ 654
SC +TGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI
Sbjct: 165 SCA-QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIH 223
Query: 655 PSCCRF-WDTHLMFVTRVCFGGAPK-REQARGL 747
+F + +++ T + +GG R+Q L
Sbjct: 224 KEATKFSYKSNIQ--TAILYGGRENYRDQVNRL 254
Score = 44.4 bits (100), Expect = 9e-05
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +2
Query: 323 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 502
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 104 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 162
Query: 503 LVA 511
L++
Sbjct: 163 LMS 165
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 47.2 bits (107), Expect = 1e-05
Identities = 38/93 (40%), Positives = 51/93 (54%), Gaps = 12/93 (12%)
Frame = +1
Query: 505 SCVPKTGSGKTLAYILPAIVHINN------QPPI----RRGDGPIALVLAPTRELAQQIQ 654
SC +TGSGKT A++LP I HI +PP RR P ALVL+PTRELA QI
Sbjct: 162 SCA-QTGSGKTAAFLLPIIQHILAGGPDMVKPPAFTNGRRTYYPCALVLSPTRELAIQIH 220
Query: 655 PSCCRF-WDTHLMFVTRVCFGGAPK-REQARGL 747
+F + +++ T + +GG R+Q L
Sbjct: 221 KEATKFSYKSNIQ--TAILYGGRENYRDQVNRL 251
Score = 44.4 bits (100), Expect = 9e-05
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +2
Query: 323 EEYRNKHEVTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKN 502
++Y N V VSG V I++F EA F V + V GY +PTP+Q P ++ ++
Sbjct: 101 DKYENI-PVEVSGDSVPAAIEHFNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRD 159
Query: 503 LVA 511
L++
Sbjct: 160 LMS 162
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 46.0 bits (104), Expect = 3e-05
Identities = 17/55 (30%), Positives = 32/55 (58%)
Frame = +2
Query: 347 VTVSGVEVHNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
V +G +V PI F + + +++++ +KT GY PTP+Q P G++L++
Sbjct: 154 VEATGDDVPQPISLFSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMS 208
Score = 35.1 bits (77), Expect = 0.054
Identities = 25/60 (41%), Positives = 33/60 (55%), Gaps = 11/60 (18%)
Frame = +1
Query: 505 SCVPKTGSGKTLAYILPAIVHINNQPPI-----------RRGDGPIALVLAPTRELAQQI 651
SC +TGSGKT A+++P + I P R+ P ALVL+PTREL+ QI
Sbjct: 208 SCA-QTGSGKTAAFLVPLVNAILQDGPDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQI 266
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 44.4 bits (100), Expect = 9e-05
Identities = 25/50 (50%), Positives = 32/50 (64%), Gaps = 5/50 (10%)
Frame = +1
Query: 517 KTGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQI 651
+T +GKT A+ LP I I + R+ DGP+AL+LAPTRELA QI
Sbjct: 426 ETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILAPTRELAAQI 475
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 42.3 bits (95), Expect = 4e-04
Identities = 30/103 (29%), Positives = 48/103 (46%)
Frame = +1
Query: 439 GLQRTDAHSSSRLADSYVWKEFSCVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 618
G ++ A + K+ ++G+GKT + + + I+++ P + ALV
Sbjct: 48 GFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALV 102
Query: 619 LAPTRELAQQIQPSCCRFWDTHLMFVTRVCFGGAPKREQARGL 747
+APTRELAQQIQ + +L C GG R+ R L
Sbjct: 103 MAPTRELAQQIQKVMSALGE-YLNVNILPCIGGTSVRDDQRKL 144
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 42.3 bits (95), Expect = 4e-04
Identities = 30/103 (29%), Positives = 48/103 (46%)
Frame = +1
Query: 439 GLQRTDAHSSSRLADSYVWKEFSCVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV 618
G ++ A + K+ ++G+GKT + + + I+++ P + ALV
Sbjct: 48 GFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHEDPHVQ-----ALV 102
Query: 619 LAPTRELAQQIQPSCCRFWDTHLMFVTRVCFGGAPKREQARGL 747
+APTRELAQQIQ + +L C GG R+ R L
Sbjct: 103 MAPTRELAQQIQKVMSALGE-YLNVNILPCIGGTSVRDDQRKL 144
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 39.5 bits (88), Expect(2) = 5e-04
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Frame = +1
Query: 517 KTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQIQPSCCRFWD 678
+TGSGKTLA+ +P + + + + GP AL++APTREL QI
Sbjct: 201 ETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMKHINALIS 260
Query: 679 THLMFVTRVCFGGAPKREQAR 741
T + T + GG + +Q R
Sbjct: 261 TTQLIATSI-VGGLAQVKQER 280
Score = 21.4 bits (43), Expect(2) = 5e-04
Identities = 8/28 (28%), Positives = 13/28 (46%)
Frame = +1
Query: 433 DNGLQRTDAHSSSRLADSYVWKEFSCVP 516
D G + +S+ D WK+F +P
Sbjct: 136 DTGKPKKSKKEASKKTDISAWKQFYFLP 163
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 41.5 bits (93), Expect = 6e-04
Identities = 21/51 (41%), Positives = 35/51 (68%)
Frame = +1
Query: 496 KEFSCVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 648
K+ KTGSGKTLA++LPAI + ++ ++ +G ++++PTREL+ Q
Sbjct: 106 KDVLASAKTGSGKTLAFLLPAI-ELLHKLNWKQHNGTGVIIVSPTRELSMQ 155
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/72 (37%), Positives = 35/72 (48%)
Frame = +1
Query: 517 KTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQPSCCRFWDTHLMFV 696
K G+GKT AY +P I I QP ++ A+V+ PTRELA Q C H+
Sbjct: 88 KNGTGKTGAYCIPVIEKI--QPALKAIQ---AMVIVPTRELALQTSQICVEL-SKHIQLK 141
Query: 697 TRVCFGGAPKRE 732
V GG R+
Sbjct: 142 VMVTTGGTDLRD 153
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Frame = +1
Query: 517 KTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQPSCCRFWDTH 684
+TGSGKT A++LP + + + + G+G P ++L PTRELA QI +F
Sbjct: 386 QTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQT 445
Query: 685 LMFVTRVCFGG 717
+M + V +GG
Sbjct: 446 MMEIKPV-YGG 455
Score = 36.3 bits (80), Expect = 0.023
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 377 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
P + F EAN + +Q+ V GY + TPIQ P+ G +++A
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMA 383
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Frame = +1
Query: 517 KTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQPSCCRFWDTH 684
+TGSGKT A++LP + + ++ + G+G P ++L PTREL QI +F
Sbjct: 597 QTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQT 656
Query: 685 LMFVTRVCFGG 717
+M + R +GG
Sbjct: 657 MMEI-RPVYGG 666
Score = 31.5 bits (68), Expect = 0.66
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
F EAN + +++ V GY + TPIQ P+ G +++A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMA 594
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Frame = +1
Query: 517 KTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQPSCCRFWDTH 684
+TGSGKT A++LP + + ++ + G+G P ++L PTREL QI +F
Sbjct: 597 QTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQT 656
Query: 685 LMFVTRVCFGG 717
+M + R +GG
Sbjct: 657 MMEI-RPVYGG 666
Score = 31.5 bits (68), Expect = 0.66
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
F EAN + +++ V GY + TPIQ P+ G +++A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMA 594
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Frame = +1
Query: 517 KTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQPSCCRFWDTH 684
+TGSGKT A++LP + + + + G+G P ++L PTRELA QI +F
Sbjct: 386 QTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQT 445
Query: 685 LMFVTRVCFGG 717
+M + V +GG
Sbjct: 446 MMEIKPV-YGG 455
Score = 36.3 bits (80), Expect = 0.023
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 377 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
P + F EAN + +Q+ V GY + TPIQ P+ G +++A
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMA 383
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Frame = +1
Query: 496 KEFSCVPKTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQPSC 663
K+ +TGSGKT A++LP + + + + G +G P ++L PTRELA QI
Sbjct: 336 KDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEG 395
Query: 664 CRFWDTHLMFVTRVCFGG 717
+F +M + V +GG
Sbjct: 396 RKFSYQSVMEIKPV-YGG 412
Score = 35.9 bits (79), Expect = 0.031
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2
Query: 377 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
P + F +++ P +++ V+ GY TPIQ P+ GK+++A
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILA 340
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 40.3 bits (90), Expect = 0.001
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Frame = +1
Query: 517 KTGSGKTLAYILPAIVHINNQPPIRRGD-GPIALVLAPTRELAQQI 651
+TGSGKT A+++P + + + G GP A+++APT+EL QI
Sbjct: 134 RTGSGKTGAFLIPLVQKLIAESKTNDGSVGPSAVIIAPTKELITQI 179
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Frame = +1
Query: 496 KEFSCVPKTGSGKTLAYILPAIVHINNQPPIRRG-DG---PIALVLAPTRELAQQIQPSC 663
K+ +TGSGKT A++LP + + + + G +G P ++L PTRELA QI
Sbjct: 336 KDILACAQTGSGKTAAFLLPIMSRLILEKDLNYGAEGGCYPRCIILTPTRELADQIYNEG 395
Query: 664 CRFWDTHLMFVTRVCFGG 717
+F +M + V +GG
Sbjct: 396 RKFSYQSVMEIKPV-YGG 412
Score = 35.9 bits (79), Expect = 0.031
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +2
Query: 377 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
P + F +++ P +++ V+ GY TPIQ P+ GK+++A
Sbjct: 296 PCKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILA 340
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 40.3 bits (90), Expect = 0.001
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Frame = +1
Query: 517 KTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQPSCCRFWDTH 684
+TGSGKT A++LP + + + + G+G P ++L PTRELA QI +F
Sbjct: 386 QTGSGKTAAFLLPIMTRLIDDNNLNTAGEGGCYPRCIILTPTRELADQIYNEGRKFAYQT 445
Query: 685 LMFVTRVCFGG 717
+M + V +GG
Sbjct: 446 MMEIKPV-YGG 455
Score = 36.3 bits (80), Expect = 0.023
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 377 PIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
P + F EAN + +Q+ V GY + TPIQ P+ G +++A
Sbjct: 339 PCKTFAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMA 383
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Frame = +1
Query: 517 KTGSGKTLAYILPAIVHINNQPPIR-RGDG---PIALVLAPTRELAQQIQPSCCRFWDTH 684
+TGSGKT A++LP + + ++ + G+G P ++L PTREL QI +F
Sbjct: 597 QTGSGKTAAFLLPIMARLIDENDLNTAGEGGCYPRCIILTPTRELTDQIYNEGRKFAYQT 656
Query: 685 LMFVTRVCFGG 717
+M + R +GG
Sbjct: 657 MMEI-RPVYGG 666
Score = 31.5 bits (68), Expect = 0.66
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
F EAN + +++ V GY + TPIQ P+ G +++A
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMA 594
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/84 (32%), Positives = 39/84 (46%)
Frame = +1
Query: 496 KEFSCVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQPSCCRFW 675
K+ TG+GKT A++LP + + +P + LVL PTRELA Q+ R
Sbjct: 186 KDICACAATGTGKTAAFVLPILERMIYRP--KGASCTRVLVLVPTRELAIQVF-QVFRKL 242
Query: 676 DTHLMFVTRVCFGGAPKREQARGL 747
T + +C GG + Q L
Sbjct: 243 STFIQLEVCLCAGGLDLKAQEAAL 266
Score = 36.7 bits (81), Expect = 0.018
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +2
Query: 389 FEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
FE+ N + + GY +PTPIQ P+A++GK++ A
Sbjct: 150 FEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICA 190
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 39.5 bits (88), Expect = 0.002
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Frame = +1
Query: 517 KTGSGKTLAYILPAIVHI------NNQPPIRRGDGPIALVLAPTRELAQQIQPSCCRFWD 678
+TGSGKTLA+ +P + + + + GP AL++APTREL QI
Sbjct: 34 ETGSGKTLAFGIPLVARLLESSDDSQETESTEVRGPRALIVAPTRELVIQIMKHINALIS 93
Query: 679 THLMFVTRVCFGGAPKREQAR 741
T + T + GG + +Q R
Sbjct: 94 TTQLIATSI-VGGLAQVKQER 113
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/44 (50%), Positives = 28/44 (63%)
Frame = +1
Query: 520 TGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 651
TGSGKTLA++LP + I N G AL+L+P+REL QI
Sbjct: 55 TGSGKTLAFVLPMMRMIQNAKLQPADIG--ALILSPSRELCSQI 96
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +1
Query: 517 KTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 651
+TG+GKTLA+ +P + ++ P G AL+L PTRELA QI
Sbjct: 134 RTGTGKTLAFAIPILQKLSVDP-----YGIYALILTPTRELAFQI 173
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +1
Query: 517 KTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 651
+TG+GKTLA+ +P + ++ P G AL+L PTRELA QI
Sbjct: 134 RTGTGKTLAFAIPILQKLSVDP-----YGIYALILTPTRELAFQI 173
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 37.1 bits (82), Expect = 0.013
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = +1
Query: 496 KEFSCVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 648
K+ + +TGSGKT A+++P + + R G AL+++PTRELA Q
Sbjct: 62 KDVVAMSRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQ 108
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 371 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
H +++ V + ++ G+ +PTPIQ + P M GK++VA
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVA 66
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 37.1 bits (82), Expect = 0.013
Identities = 20/51 (39%), Positives = 31/51 (60%)
Frame = +1
Query: 496 KEFSCVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQ 648
K+ + +TGSGKT A+++P + + R G AL+++PTRELA Q
Sbjct: 62 KDVVAMSRTGSGKTAAFVIPMLQKLKR----RDTTGIRALMVSPTRELALQ 108
Score = 33.1 bits (72), Expect = 0.22
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 371 HNPIQYFEEANFPDYVQQGVKTMGYKEPTPIQAQGWPIAMSGKNLVA 511
H +++ V + ++ G+ +PTPIQ + P M GK++VA
Sbjct: 20 HKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVA 66
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 37.1 bits (82), Expect = 0.013
Identities = 25/73 (34%), Positives = 36/73 (49%)
Frame = +1
Query: 430 KDNGLQRTDAHSSSRLADSYVWKEFSCVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPI 609
KDN + +A S + KTGSGKTLA ++P ++ + G
Sbjct: 92 KDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIP-VLEALWRAKWSPDYGLG 150
Query: 610 ALVLAPTRELAQQ 648
AL+++PTRELA Q
Sbjct: 151 ALIISPTRELALQ 163
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 36.3 bits (80), Expect = 0.023
Identities = 30/107 (28%), Positives = 45/107 (42%)
Frame = +1
Query: 427 CKDNGLQRTDAHSSSRLADSYVWKEFSCVPKTGSGKTLAYILPAIVHINNQPPIRRGDGP 606
C+ G + + L + K+ + +TGSGKT A+ +P + + + P
Sbjct: 59 CQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHP-----QAF 113
Query: 607 IALVLAPTRELAQQIQPSCCRFWDTHLMFVTRVCFGGAPKREQARGL 747
LVL PTRELA QI + + + V GG QA L
Sbjct: 114 FCLVLTPTRELAFQIGQQ-FEALGSGIGLIAAVIVGGVDMAAQAMAL 159
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 36.3 bits (80), Expect = 0.023
Identities = 25/77 (32%), Positives = 38/77 (49%)
Frame = +1
Query: 517 KTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQPSCCRFWDTHLMFV 696
++G+GKT + + + ++ Q +R AL+L+PTRELA QIQ D ++
Sbjct: 71 QSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGD-YMNVQ 124
Query: 697 TRVCFGGAPKREQARGL 747
C GG E R L
Sbjct: 125 CHACIGGTNLGEDIRKL 141
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 36.3 bits (80), Expect = 0.023
Identities = 25/77 (32%), Positives = 38/77 (49%)
Frame = +1
Query: 517 KTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQPSCCRFWDTHLMFV 696
++G+GKT + + + ++ Q +R AL+L+PTRELA QIQ D ++
Sbjct: 71 QSGTGKTATFSISVLQSLDTQ--VRETQ---ALILSPTRELAVQIQKVVLALGD-YMNVQ 124
Query: 697 TRVCFGGAPKREQARGL 747
C GG E R L
Sbjct: 125 CHACIGGTNLGEDIRKL 141
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 35.5 bits (78), Expect = 0.041
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = +1
Query: 520 TGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQ 648
TGSGKTLA+++P ++ + ++ P L++APTREL Q
Sbjct: 782 TGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQ 829
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 35.5 bits (78), Expect = 0.041
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = +1
Query: 520 TGSGKTLAYILPAIVHI-----NNQPPIRRGDGPIALVLAPTRELAQQ 648
TGSGKTLA+++P ++ + ++ P L++APTREL Q
Sbjct: 782 TGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRLLIVAPTRELVNQ 829
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 34.3 bits (75), Expect = 0.094
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 5/48 (10%)
Frame = +1
Query: 520 TGSGKTLAYILPA---IVHINNQPPIRRGDGP--IALVLAPTRELAQQ 648
TGSGKTLA+ LP I+ + + + +A+VL PTRELA Q
Sbjct: 172 TGSGKTLAFALPVIDEILELKQRADYSSSNSSKLLAVVLEPTRELAAQ 219
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 32.7 bits (71), Expect = 0.29
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +1
Query: 496 KEFSCVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQIQPSCCRFW 675
++ + TGSGKT+ Y+LP + + ++P A++L P + L QI R W
Sbjct: 157 RDVAIAAPTGSGKTICYVLPVLAAVGSKP----SKILQAVILVPVQTLVAQIVDEFKR-W 211
Query: 676 DTHLMFVTRVCFGGAPKRE-QARGL 747
+ V GA E +AR L
Sbjct: 212 NDESGVAKVVSLSGANDFEKEARQL 236
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 32.7 bits (71), Expect = 0.29
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Frame = +1
Query: 520 TGSGKTLAYILPAI-VHINNQP---PIRRGDGPIALVLAPTRELAQQIQPSC 663
TG GKT A+++PAI + + +P I P L+LA T L +Q+ C
Sbjct: 138 TGIGKTYAFLIPAIEIALRERPLLTNISTTPSPTILILANTNSLVEQLFNRC 189
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 31.9 bits (69), Expect = 0.50
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +1
Query: 508 CVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV-LAPTRELAQQIQPSCCRFWDTH 684
C K+G GKT +++ + + P+ DG +++V + TRELA QI RF
Sbjct: 83 CQAKSGMGKTAVFVITTLQQLE---PV---DGEVSVVCMCHTRELAFQISKEYERFSKYL 136
Query: 685 LMFVTRVCFGG-APKREQAR 741
V FGG A K+++ R
Sbjct: 137 PGVKVAVFFGGMAIKKDEER 156
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 31.9 bits (69), Expect = 0.50
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +1
Query: 508 CVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV-LAPTRELAQQIQPSCCRFWDTH 684
C K+G GKT +++ + + P+ DG +++V + TRELA QI RF
Sbjct: 83 CQAKSGMGKTAVFVITTLQQLE---PV---DGEVSVVCMCHTRELAFQISKEYERFSKYL 136
Query: 685 LMFVTRVCFGG-APKREQAR 741
V FGG A K+++ R
Sbjct: 137 PGVKVAVFFGGMAIKKDEER 156
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 31.9 bits (69), Expect = 0.50
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Frame = +1
Query: 508 CVPKTGSGKTLAYILPAIVHINNQPPIRRGDGPIALV-LAPTRELAQQIQPSCCRFWDTH 684
C K+G GKT +++ + + P+ DG +++V + TRELA QI RF
Sbjct: 82 CQAKSGMGKTAVFVITTLQQLE---PV---DGEVSVVCMCHTRELAFQISKEYERFSKYL 135
Query: 685 LMFVTRVCFGG-APKREQAR 741
V FGG A K+++ R
Sbjct: 136 PGVKVAVFFGGMAIKKDEER 155
>AC091124-2|AAK27879.2| 1114|Caenorhabditis elegans Hypothetical
protein Y47A7.1 protein.
Length = 1114
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 5 PASERIHSLNKHLQLNPKNNHVW 73
PAS ++H L++ LQLN N+ W
Sbjct: 773 PASHQLHCLSRALQLNKANDSAW 795
>Z99710-10|CAN99659.1| 222|Caenorhabditis elegans Hypothetical
protein F08A8.8 protein.
Length = 222
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +1
Query: 91 VETVVPNLEEATNSAIIRLGLATVAIDLEDLEALVGKKN 207
+ETV+ LE N +RL A VA E LE++ GK N
Sbjct: 71 IETVILALEAGMNLEDVRLEFAHVATREEILESVFGKLN 109
>Z68220-9|CAL64002.1| 312|Caenorhabditis elegans Hypothetical
protein T20D3.5b protein.
Length = 312
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 146 RRIIAEFVASSKFGTTVSTAIIPI 75
+++I +FVA S G T+STA P+
Sbjct: 220 QQLIGDFVAGSLLGATISTAFFPL 243
>Z68220-8|CAA92487.1| 221|Caenorhabditis elegans Hypothetical
protein T20D3.5a protein.
Length = 221
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -3
Query: 146 RRIIAEFVASSKFGTTVSTAIIPI 75
+++I +FVA S G T+STA P+
Sbjct: 129 QQLIGDFVAGSLLGATISTAFFPL 152
>Z38112-4|CAA86232.1| 809|Caenorhabditis elegans Hypothetical
protein E03A3.2 protein.
Length = 809
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +1
Query: 520 TGSGKTLAYILPAIVH 567
TG+GK+L Y LPA+VH
Sbjct: 203 TGAGKSLCYQLPAVVH 218
>AC006714-20|AAK29723.2| 281|Caenorhabditis elegans Serpentine
receptor, class z protein9 protein.
Length = 281
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = -1
Query: 502 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILF 323
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 322 D 320
+
Sbjct: 86 N 86
>AC006714-16|AAK29721.3| 281|Caenorhabditis elegans Serpentine
receptor, class z protein8 protein.
Length = 281
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = -1
Query: 502 ILSRHSYRPALSLNGRRFFVTHCLYTLLHIIRKICFFKVLNRIMNLNATYSYLVFISILF 323
++ R +YR N + + + Y + +I + F + + ++NLN T +L I+I+F
Sbjct: 26 LVYRKAYRFNSERNTATYPIVNSFYKKVALINALYFIESILIVVNLNVTNEWLNKIAIIF 85
Query: 322 D 320
+
Sbjct: 86 N 86
>U93847-1|AAB58269.1| 760|Caenorhabditis elegans elongation
factor-2 kinase EFK-1B isoform protein.
Length = 760
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = -3
Query: 239 IWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPITRHDY 60
++ +H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 647 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 706
Query: 59 FSDLVEDVYLNYGFFLTQ 6
+ + E +Y G+ L Q
Sbjct: 707 LAKMAE-MYKEGGYGLNQ 723
>U93846-1|AAB58268.1| 768|Caenorhabditis elegans elongation
factor-2 kinase EFK-1A isoform protein.
Length = 768
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = -3
Query: 239 IWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPITRHDY 60
++ +H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 655 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 714
Query: 59 FSDLVEDVYLNYGFFLTQ 6
+ + E +Y G+ L Q
Sbjct: 715 LAKMAE-MYKEGGYGLNQ 731
>U10414-7|AAN63383.1| 768|Caenorhabditis elegans Elongation factor
kinase protein1, isoform a protein.
Length = 768
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = -3
Query: 239 IWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPITRHDY 60
++ +H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 655 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 714
Query: 59 FSDLVEDVYLNYGFFLTQ 6
+ + E +Y G+ L Q
Sbjct: 715 LAKMAE-MYKEGGYGLNQ 731
>U10414-6|AAN63384.1| 760|Caenorhabditis elegans Elongation factor
kinase protein1, isoform b protein.
Length = 760
Score = 28.7 bits (61), Expect = 4.7
Identities = 18/78 (23%), Positives = 34/78 (43%)
Frame = -3
Query: 239 IWASHVLPSREFFFPTKASRSSKSIATVAKPRRIIAEFVASSKFGTTVSTAIIPITRHDY 60
++ +H + + P + + KSI + E S G T ++ P+TRH+
Sbjct: 647 LYMAHAYETGQHLGPNRRTDYKKSIDWYQRVVGFQEEEELDSDCGKTTFSSFAPLTRHEI 706
Query: 59 FSDLVEDVYLNYGFFLTQ 6
+ + E +Y G+ L Q
Sbjct: 707 LAKMAE-MYKEGGYGLNQ 723
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +1
Query: 517 KTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 651
++G+GKT A++L + I+ P + LAPT ELA+QI
Sbjct: 256 QSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQI 295
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +1
Query: 517 KTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 651
++G+GKT A++L + I+ P + LAPT ELA+QI
Sbjct: 281 QSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQI 320
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/45 (37%), Positives = 26/45 (57%)
Frame = +1
Query: 517 KTGSGKTLAYILPAIVHINNQPPIRRGDGPIALVLAPTRELAQQI 651
++G+GKT A++L + I+ P + LAPT ELA+QI
Sbjct: 665 QSGTGKTAAFVLTMLCRIDVNLMC-----PQCICLAPTLELAKQI 704
>Z81103-2|CAB03213.1| 403|Caenorhabditis elegans Hypothetical
protein M04G12.1b protein.
Length = 403
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +2
Query: 284 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 442
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 144 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 194
>Z81103-1|CAB03208.2| 457|Caenorhabditis elegans Hypothetical
protein M04G12.1a protein.
Length = 457
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +2
Query: 284 PHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQYFEEAN---FPDYVQQGVKTMG 442
P PTVL SP+ V N +V H + +AN D +QQ ++++G
Sbjct: 171 PQPTVLPTSPFHVPTMNNLEQVL-----THQRLLQMTQANPRAVDDLIQQSLRSLG 221
>U00048-6|AAB53828.1| 873|Caenorhabditis elegans Hypothetical
protein C05D11.8 protein.
Length = 873
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = -3
Query: 569 MCTMAGKM*ANVLPEPVLGTQLNSFQT*LSASLELEWASVLCNPL 435
MCT+ + AN PEP++G L+ F T L+W+ L + L
Sbjct: 67 MCTLL-MLEANSQPEPIIGPILDKFFTEQILERVLDWSIQLTDSL 110
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/77 (22%), Positives = 39/77 (50%)
Frame = +1
Query: 424 RCKDNGLQRTDAHSSSRLADSYVWKEFSCVPKTGSGKTLAYILPAIVHINNQPPIRRGDG 603
R K++ R + + + ++ K+G+GKTL + + A+ ++++ R
Sbjct: 36 RLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDS-----RSSH 90
Query: 604 PIALVLAPTRELAQQIQ 654
+++ PTRE++ QI+
Sbjct: 91 IQKVIVTPTREISVQIK 107
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/77 (22%), Positives = 39/77 (50%)
Frame = +1
Query: 424 RCKDNGLQRTDAHSSSRLADSYVWKEFSCVPKTGSGKTLAYILPAIVHINNQPPIRRGDG 603
R K++ R + + + ++ K+G+GKTL + + A+ ++++ R
Sbjct: 36 RLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDS-----RSSH 90
Query: 604 PIALVLAPTRELAQQIQ 654
+++ PTRE++ QI+
Sbjct: 91 IQKVIVTPTREISVQIK 107
>AF016427-5|AAB65357.2| 273|Caenorhabditis elegans Ground-like (grd
related) protein13 protein.
Length = 273
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +2
Query: 251 FIQPFNK-NFYDPHPTVLKRSPYEVEEYRNKHEVTVSGVEVHNPIQ 385
+ QP++ +F P PT++++ PY Y H + + + HN Q
Sbjct: 61 YTQPYSPVSFRPPPPTIIQQQPY----YSVPHPIPIQTQQFHNSYQ 102
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,402,444
Number of Sequences: 27780
Number of extensions: 391228
Number of successful extensions: 1251
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 1137
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1219
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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