Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00575
         (764 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF397531-1|AAK92125.1|  372|Drosophila melanogaster Neu5Ac synth...    86   4e-17
AE014297-1519|AAF54811.2|  372|Drosophila melanogaster CG5232-PA...    86   4e-17
BT023787-1|AAZ41796.1|  662|Drosophila melanogaster LD01568p pro...    30   3.0  
AE014297-2326|AAF55397.1|  643|Drosophila melanogaster CG5265-PA...    30   3.0  
AE014297-453|ABI31145.1|  657|Drosophila melanogaster CG1041-PB,...    30   3.0  
AE014297-452|AAF54128.2|  662|Drosophila melanogaster CG1041-PA,...    30   3.0  
AY089278-1|AAL90016.1|  270|Drosophila melanogaster AT07769p pro...    29   7.0  
AE014296-2930|AAF49326.2|  270|Drosophila melanogaster CG7542-PA...    29   7.0  
AE014134-833|AAN10518.3| 1491|Drosophila melanogaster CG34126-PB...    29   7.0  
AE014297-3720|ABC66189.2| 1519|Drosophila melanogaster CG34027-P...    29   9.2  

>AF397531-1|AAK92125.1|  372|Drosophila melanogaster Neu5Ac synthase
           protein.
          Length = 372

 Score = 86.2 bits (204), Expect = 4e-17
 Identities = 40/75 (53%), Positives = 52/75 (69%)
 Frame = +1

Query: 298 GASCVKFQKTCLGEKFTKKYLERPYDNPNSWGKTYGEHKSHLEFSDTQYRELFRYAQEVG 477
           G  CVKFQK+ L  KFT+  L+R Y + ++WGKTYGEHK +LEFS  QY +L  + +E+ 
Sbjct: 43  GCHCVKFQKSDLPAKFTRSALDREYISDHAWGKTYGEHKEYLEFSKDQYLQLQAHCKELN 102

Query: 478 ILFTASAMDMDLLTF 522
           + FTASAMD   L F
Sbjct: 103 VDFTASAMDERSLEF 117



 Score = 80.2 bits (189), Expect = 3e-15
 Identities = 38/84 (45%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
 Frame = +3

Query: 510 SFDFLVNLKVPFIQIGSGDSNNLLFLKYAASKKIPLIISTGMVDKTAVKTIYDIISSDHK 689
           S +FL  L VPFI+IGSGD+NN   LK AA+  +PL+ISTGM     V+ I   +    K
Sbjct: 114 SLEFLSALNVPFIKIGSGDANNFPLLKKAANLNLPLVISTGMQTMQTVERIVQTMRESGK 173

Query: 690 Q-FCLLHCISAYPVPFEDCNLTVL 758
           + + L+HC+S+YP   +DC+L ++
Sbjct: 174 EDYALMHCVSSYPTDPKDCSLQLI 197


>AE014297-1519|AAF54811.2|  372|Drosophila melanogaster CG5232-PA
           protein.
          Length = 372

 Score = 86.2 bits (204), Expect = 4e-17
 Identities = 40/75 (53%), Positives = 52/75 (69%)
 Frame = +1

Query: 298 GASCVKFQKTCLGEKFTKKYLERPYDNPNSWGKTYGEHKSHLEFSDTQYRELFRYAQEVG 477
           G  CVKFQK+ L  KFT+  L+R Y + ++WGKTYGEHK +LEFS  QY +L  + +E+ 
Sbjct: 43  GCHCVKFQKSDLPAKFTRSALDREYISDHAWGKTYGEHKEYLEFSKDQYLQLQAHCKELN 102

Query: 478 ILFTASAMDMDLLTF 522
           + FTASAMD   L F
Sbjct: 103 VDFTASAMDERSLEF 117



 Score = 80.2 bits (189), Expect = 3e-15
 Identities = 38/84 (45%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
 Frame = +3

Query: 510 SFDFLVNLKVPFIQIGSGDSNNLLFLKYAASKKIPLIISTGMVDKTAVKTIYDIISSDHK 689
           S +FL  L VPFI+IGSGD+NN   LK AA+  +PL+ISTGM     V+ I   +    K
Sbjct: 114 SLEFLSALNVPFIKIGSGDANNFPLLKKAANLNLPLVISTGMQTMQTVERIVQTMRESGK 173

Query: 690 Q-FCLLHCISAYPVPFEDCNLTVL 758
           + + L+HC+S+YP   +DC+L ++
Sbjct: 174 EDYALMHCVSSYPTDPKDCSLQLI 197


>BT023787-1|AAZ41796.1|  662|Drosophila melanogaster LD01568p
           protein.
          Length = 662

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +3

Query: 477 DFIHRLCHGHGSFDFLVNL-KVPFIQIGSGDSNNLLFLKYAASKKIP 614
           D+  R+ +G G F+ +V+  K+P +++G  + +N  F K   + +IP
Sbjct: 174 DYTARVIYGLGEFNDMVHANKIPIVKMGKNELDNSQFGKVFGTCRIP 220


>AE014297-2326|AAF55397.1|  643|Drosophila melanogaster CG5265-PA
           protein.
          Length = 643

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = +3

Query: 477 DFIHRLCHGHGSFDFLVNLK-VPFIQIGSGDSNNLLFLKYAASKKIP 614
           D+  R+  G G F+ LV+ K +P +++G  + +N  F K   + +IP
Sbjct: 149 DYTSRVIFGLGEFNDLVHAKKIPIVKMGKNELDNSQFGKVFGTCRIP 195


>AE014297-453|ABI31145.1|  657|Drosophila melanogaster CG1041-PB,
           isoform B protein.
          Length = 657

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +3

Query: 477 DFIHRLCHGHGSFDFLVNL-KVPFIQIGSGDSNNLLFLKYAASKKIP 614
           D+  R+ +G G F+ +V+  K+P +++G  + +N  F K   + +IP
Sbjct: 169 DYTARVIYGLGEFNDMVHANKIPIVKMGKNELDNSQFGKVFGTCRIP 215


>AE014297-452|AAF54128.2|  662|Drosophila melanogaster CG1041-PA,
           isoform A protein.
          Length = 662

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 14/47 (29%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
 Frame = +3

Query: 477 DFIHRLCHGHGSFDFLVNL-KVPFIQIGSGDSNNLLFLKYAASKKIP 614
           D+  R+ +G G F+ +V+  K+P +++G  + +N  F K   + +IP
Sbjct: 174 DYTARVIYGLGEFNDMVHANKIPIVKMGKNELDNSQFGKVFGTCRIP 220


>AY089278-1|AAL90016.1|  270|Drosophila melanogaster AT07769p
           protein.
          Length = 270

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -2

Query: 442 IVYRRIPNDFCVLRTSFPTSLGCRKAFLDIFL*IS 338
           +VY++  + + +  TSF TS+GC+  F  +F  IS
Sbjct: 220 LVYKQGNSSYLIGSTSFGTSMGCQVGFPAVFTRIS 254


>AE014296-2930|AAF49326.2|  270|Drosophila melanogaster CG7542-PA
           protein.
          Length = 270

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -2

Query: 442 IVYRRIPNDFCVLRTSFPTSLGCRKAFLDIFL*IS 338
           +VY++  + + +  TSF TS+GC+  F  +F  IS
Sbjct: 220 LVYKQGNSSYLIGSTSFGTSMGCQVGFPAVFTRIS 254


>AE014134-833|AAN10518.3| 1491|Drosophila melanogaster CG34126-PB
           protein.
          Length = 1491

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = -2

Query: 652 TAVLSTIPVDIIKGIFFEAAYFRKSKLFESPEPIWINGTFRLTR 521
           T V++T+ V+ +   F  +    + ++ ES  P W N   RLTR
Sbjct: 140 TIVVNTVNVNFVSAAFTASVQMSRIRV-ESKTPKWANADLRLTR 182


>AE014297-3720|ABC66189.2| 1519|Drosophila melanogaster CG34027-PA
            protein.
          Length = 1519

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 17/49 (34%), Positives = 27/49 (55%)
 Frame = +3

Query: 306  LREVSKDMSRREIYKKISRKALRQPKLVGKDVRRTQKSFGILRYTIQRI 452
            L E +KD+S REI +  + KA +Q  + G +  R+ K  G L  T+  +
Sbjct: 918  LDESNKDVSIREIKRSFNLKAQKQDSIKGLET-RSIKGLGYLPVTMNAL 965


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,923,121
Number of Sequences: 53049
Number of extensions: 738883
Number of successful extensions: 1763
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1761
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3520086471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)