Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00573
         (711 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48334-1|CAA88308.1|  214|Caenorhabditis elegans Hypothetical pr...   128   4e-30
Z66511-7|CAD57693.1|  567|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z81055-1|CAB02889.1|  618|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z68760-10|CAL49442.1| 1427|Caenorhabditis elegans Hypothetical p...    28   5.7  
Z68760-9|CAJ80808.1| 1379|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z68760-8|CAA92996.1| 1398|Caenorhabditis elegans Hypothetical pr...    28   5.7  
Z46791-1|CAA86761.1|  476|Caenorhabditis elegans Hypothetical pr...    28   5.7  
AF099919-10|AAC68792.1|  205|Caenorhabditis elegans Max-like pro...    28   5.7  
U50199-4|AAA91264.2|  142|Caenorhabditis elegans Abnormal cell l...    28   7.6  
AF099913-8|ABB51194.1|  301|Caenorhabditis elegans Hypothetical ...    28   7.6  

>Z48334-1|CAA88308.1|  214|Caenorhabditis elegans Hypothetical
           protein F10B5.1 protein.
          Length = 214

 Score =  128 bits (309), Expect = 4e-30
 Identities = 61/86 (70%), Positives = 67/86 (77%)
 Frame = +2

Query: 248 KERGKDQFHIRMRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMS 427
           K  GKD FH+R+R HPFHV RINKMLSCAGADRLQTGMRGA+GKPQG VARV IG  + S
Sbjct: 78  KNCGKDGFHLRVRKHPFHVTRINKMLSCAGADRLQTGMRGAYGKPQGLVARVDIGDILFS 137

Query: 428 VRSSDRWKAQVIEALRRAKFKFPGRQ 505
           +R  +      IEA RRAKFKFPGRQ
Sbjct: 138 MRIKEGNVKHAIEAFRRAKFKFPGRQ 163



 Score =  121 bits (292), Expect = 4e-28
 Identities = 54/67 (80%), Positives = 58/67 (86%)
 Frame = +3

Query: 54  KNKPYPKSRFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICC 233
           KNKPYPKSRFCRGVPD KIRIFDLG KRA VD FP CVH++S+E E LSSEALEA RIC 
Sbjct: 13  KNKPYPKSRFCRGVPDAKIRIFDLGNKRANVDTFPACVHMMSNEREHLSSEALEAARICA 72

Query: 234 NKYLVKN 254
           NKY+VKN
Sbjct: 73  NKYMVKN 79



 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 25/50 (50%), Positives = 36/50 (72%)
 Frame = +1

Query: 493 PRTSKVYVSKKWGFTKYERDEFEKLREEGRLANDGCIVQYRPEHGPLDAW 642
           P    +  S+KWGFTK++R+++E++R EGRL +DG  VQ + EHGPL  W
Sbjct: 160 PGRQIIVSSRKWGFTKWDREDYERMRAEGRLRSDGVGVQLQREHGPLTKW 209


>Z66511-7|CAD57693.1|  567|Caenorhabditis elegans Hypothetical
           protein F07A11.6d protein.
          Length = 567

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 17/41 (41%), Positives = 21/41 (51%)
 Frame = -3

Query: 451 LPPVTRAHGHDGLSNANTCYSTLRLAKRTTHPSLEPISSSA 329
           +P VT A   + LSN  T  ST  LA   T  +L P+S  A
Sbjct: 46  VPVVTTASTPNPLSNLETLLSTASLANLATGGALNPLSMLA 86


>Z81055-1|CAB02889.1|  618|Caenorhabditis elegans Hypothetical
           protein F01G10.1 protein.
          Length = 618

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
 Frame = +2

Query: 362 RGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIE--ALRRAKFKFPGRQK 508
           R   GKP   +A+   G+ I  + + D W  + +    +   K +F G QK
Sbjct: 228 RSTKGKPTAIIAKTLKGKGIEGIENEDNWHGKPVPEGTVNAIKARFHGSQK 278


>Z68760-10|CAL49442.1| 1427|Caenorhabditis elegans Hypothetical
            protein F36H1.2c protein.
          Length = 1427

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 32   SKMLPVLQK*TVSEIEVLSGCT*SQDPYLR 121
            SK +P  ++ TV  ++    CT S DPYLR
Sbjct: 1042 SKGIPSAERLTVGHVKKFVPCTSSLDPYLR 1071


>Z68760-9|CAJ80808.1| 1379|Caenorhabditis elegans Hypothetical protein
            F36H1.2b protein.
          Length = 1379

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 32   SKMLPVLQK*TVSEIEVLSGCT*SQDPYLR 121
            SK +P  ++ TV  ++    CT S DPYLR
Sbjct: 1013 SKGIPSAERLTVGHVKKFVPCTSSLDPYLR 1042


>Z68760-8|CAA92996.1| 1398|Caenorhabditis elegans Hypothetical protein
            F36H1.2a protein.
          Length = 1398

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +2

Query: 32   SKMLPVLQK*TVSEIEVLSGCT*SQDPYLR 121
            SK +P  ++ TV  ++    CT S DPYLR
Sbjct: 1013 SKGIPSAERLTVGHVKKFVPCTSSLDPYLR 1042


>Z46791-1|CAA86761.1|  476|Caenorhabditis elegans Hypothetical
           protein C09G5.2 protein.
          Length = 476

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -1

Query: 381 GLPNAPRIPVWSLSAPA 331
           G PN+P +P+W LS P+
Sbjct: 232 GFPNSPLLPIWLLSYPS 248


>AF099919-10|AAC68792.1|  205|Caenorhabditis elegans Max-like
           protein 2 protein.
          Length = 205

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 14/49 (28%), Positives = 26/49 (53%)
 Frame = +3

Query: 78  RFCRGVPDPKIRIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGR 224
           R C  +   K  I D  K+ A ++     + +++ EYEQ++S   +AG+
Sbjct: 93  RACDFMSQLKTDISDADKQLAQLNAQAAALEMIASEYEQMASSVPDAGQ 141


>U50199-4|AAA91264.2|  142|Caenorhabditis elegans Abnormal cell
           lineage protein 32 protein.
          Length = 142

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +3

Query: 402 FALDSPSCPCALVTGGRHRSSRLCAVPSSSSPDVKSLR 515
           F+LDSP+ P +L  GG     + C    + SP +  +R
Sbjct: 36  FSLDSPNYPDSLSNGGGKDDKKKCRRYKTPSPQLLRMR 73


>AF099913-8|ABB51194.1|  301|Caenorhabditis elegans Hypothetical
           protein C29F9.4 protein.
          Length = 301

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +1

Query: 532 FTKYERDEFEKLREEGRLANDGCIVQYR 615
           F K +RDEFE++R +  LA +  I  Y+
Sbjct: 136 FFKSQRDEFERIRYDPELAEEHFIEAYK 163


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,536,822
Number of Sequences: 27780
Number of extensions: 394952
Number of successful extensions: 1144
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1110
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1144
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)