Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00572X
(505 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep: ... 119 4e-26
UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71; Eukaryo... 119 4e-26
UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellul... 116 2e-25
UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6; Thermop... 79 6e-14
UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10; Archae... 72 9e-12
UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3; Archaea... 71 1e-11
UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17; Euryar... 70 3e-11
UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12; Archae... 69 5e-11
UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1; Encephal... 69 8e-11
UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4; Thermop... 68 1e-10
UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1; ... 68 1e-10
UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella... 68 1e-10
UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus N... 64 2e-09
UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2; Crenarchaeot... 62 7e-09
UniRef50_Q95299 Cluster: Ribosomal protein L8; n=1; Sus scrofa|R... 56 3e-07
UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1; Nanoarc... 56 3e-07
UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1; ... 50 2e-05
UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeb... 49 7e-05
UniRef50_Q9G8Q6 Cluster: Ribosomal protein L2; n=1; Naegleria gr... 46 6e-04
UniRef50_O23283 Cluster: Putative uncharacterized protein; n=1; ... 45 8e-04
UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;... 45 0.001
UniRef50_Q8LWZ7 Cluster: Ribosomal protein L2; n=3; Phaeophyceae... 44 0.002
UniRef50_Q9G4C8 Cluster: Ribosomal protein L2; n=1; Thraustochyt... 44 0.003
UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellul... 44 0.003
UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep... 43 0.003
UniRef50_Q9TAJ4 Cluster: Ribosomal protein L2; n=1; Cafeteria ro... 43 0.005
UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;... 43 0.005
UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep... 42 0.006
UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2; Streptophyti... 42 0.006
UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular org... 42 0.006
UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;... 42 0.006
UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellul... 42 0.006
UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus C... 42 0.008
UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus ... 42 0.008
UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellul... 42 0.008
UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10; Magnoli... 42 0.010
UniRef50_A7NTF6 Cluster: Chromosome chr18 scaffold_1, whole geno... 42 0.010
UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2; n... 42 0.010
UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5; Tracheophyta... 40 0.032
UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas d... 40 0.042
UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis ... 40 0.042
UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3; Dictyostelii... 40 0.042
UniRef50_Q9MG94 Cluster: Ribosomal protein L2; n=2; Chrysodidymu... 39 0.074
UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria tene... 39 0.074
UniRef50_A4Q378 Cluster: Translation protein SH3-like; n=1; Medi... 38 0.097
UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome. prec... 38 0.13
UniRef50_Q4UCG9 Cluster: 50S ribosomal protein L2, putative; n=8... 38 0.17
UniRef50_A7CUV2 Cluster: Ribosomal protein L2; n=1; Opitutaceae ... 37 0.22
UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma g... 37 0.22
UniRef50_Q951B6 Cluster: Ribosomal protein L2; n=5; Tetrahymena|... 37 0.22
UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular... 37 0.22
UniRef50_A3LNH9 Cluster: Predicted protein; n=5; Saccharomycetac... 37 0.30
UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6; Eurotiom... 37 0.30
UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17; Bacteri... 37 0.30
UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2; Fi... 36 0.39
UniRef50_Q4P5V2 Cluster: Putative uncharacterized protein; n=1; ... 36 0.39
UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondri... 36 0.39
UniRef50_P15765 Cluster: Mitochondrial 60S ribosomal protein L2;... 36 0.39
UniRef50_A7AXH0 Cluster: Rpl2; n=1; Babesia bovis|Rep: Rpl2 - Ba... 35 0.91
UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondri... 35 0.91
UniRef50_A3DC11 Cluster: Transglutaminase-like protein precursor... 35 1.2
UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90; Bacteri... 35 1.2
UniRef50_Q9Z543 Cluster: Putative DNA-binding protein; n=1; Stre... 34 1.6
UniRef50_Q4MYC0 Cluster: Ribosomal protein L2, putative; n=1; Th... 34 1.6
UniRef50_Q5DUX7 Cluster: Hydrogenosomal 60S ribosomal protein L2... 34 1.6
UniRef50_UPI0000ECA55B Cluster: UPI0000ECA55B related cluster; n... 33 3.7
UniRef50_Q4T4P2 Cluster: Chromosome 9 SCAF9570, whole genome sho... 33 3.7
UniRef50_Q12FX3 Cluster: Spore coat U; n=1; Polaromonas sp. JS66... 33 3.7
UniRef50_A1SQS0 Cluster: Putative uncharacterized protein precur... 33 3.7
UniRef50_A6R0K7 Cluster: Predicted protein; n=2; Pezizomycotina|... 33 4.8
UniRef50_Q9JAD5 Cluster: Polyprotein; n=68; Flavivirus|Rep: Poly... 32 6.4
UniRef50_Q7NIR0 Cluster: Phosphoribulokinase; n=1; Gloeobacter v... 32 6.4
UniRef50_A7PDE5 Cluster: Chromosome chr17 scaffold_12, whole gen... 32 6.4
UniRef50_Q556C6 Cluster: G-protein-coupled receptor (GPCR) famil... 32 6.4
UniRef50_Q0CD71 Cluster: Predicted protein; n=3; Trichocomaceae|... 32 6.4
UniRef50_Q25807 Cluster: Rpl2 protein; n=2; Plasmodium|Rep: Rpl2... 32 8.5
>UniRef50_Q06B43 Cluster: Ribosomal protein; n=7; Coelomata|Rep:
Ribosomal protein - Codakia orbicularis
Length = 234
Score = 119 bits (286), Expect = 4e-26
Identities = 52/65 (80%), Positives = 62/65 (95%)
Frame = -3
Query: 443 ARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAY 264
ARASGN+ATVI HNPD K++RVKLPSG+KKV+PS+NR +VGIVAGGGRIDKP+LKAGRAY
Sbjct: 103 ARASGNYATVISHNPDTKKSRVKLPSGSKKVIPSANRAIVGIVAGGGRIDKPMLKAGRAY 162
Query: 263 HKYRS 249
HKY++
Sbjct: 163 HKYKA 167
Score = 105 bits (253), Expect = 4e-22
Identities = 46/51 (90%), Positives = 48/51 (94%)
Frame = -2
Query: 255 QVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 103
+ KRNCWP VRGVAMNPVEHPHGGGNHQHIGKASTV+R TSAGRKVGLIAA
Sbjct: 166 KAKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVRRDTSAGRKVGLIAA 216
>UniRef50_Q9V3G1 Cluster: 60S ribosomal protein L8; n=71;
Eukaryota|Rep: 60S ribosomal protein L8 - Drosophila
melanogaster (Fruit fly)
Length = 256
Score = 119 bits (286), Expect = 4e-26
Identities = 54/64 (84%), Positives = 59/64 (92%)
Frame = -3
Query: 443 ARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAY 264
AR SGN+ATVI HN D K+TRVKLPSGAKKV+PS+NR MVGIVAGGGRIDKPILKAGRAY
Sbjct: 127 ARTSGNYATVIAHNQDTKKTRVKLPSGAKKVVPSANRAMVGIVAGGGRIDKPILKAGRAY 186
Query: 263 HKYR 252
HKY+
Sbjct: 187 HKYK 190
Score = 107 bits (257), Expect = 1e-22
Identities = 48/51 (94%), Positives = 49/51 (96%)
Frame = -2
Query: 255 QVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 103
+VKRN WP VRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA
Sbjct: 190 KVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 240
Score = 39.5 bits (88), Expect = 0.042
Identities = 16/20 (80%), Positives = 18/20 (90%)
Frame = -1
Query: 502 MPEGTIVSNLEEKMGDRGRM 443
MPEGTI+ NLEEK GDRGR+
Sbjct: 107 MPEGTIICNLEEKTGDRGRL 126
>UniRef50_P62917 Cluster: 60S ribosomal protein L8; n=122; cellular
organisms|Rep: 60S ribosomal protein L8 - Homo sapiens
(Human)
Length = 257
Score = 116 bits (280), Expect = 2e-25
Identities = 51/65 (78%), Positives = 61/65 (93%)
Frame = -3
Query: 443 ARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAY 264
ARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAY
Sbjct: 127 ARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAY 186
Query: 263 HKYRS 249
HKY++
Sbjct: 187 HKYKA 191
Score = 95.9 bits (228), Expect = 5e-19
Identities = 41/51 (80%), Positives = 44/51 (86%)
Frame = -2
Query: 255 QVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 103
+ KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R AGRKVGLIAA
Sbjct: 190 KAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGRKVGLIAA 240
Score = 34.7 bits (76), Expect = 1.2
Identities = 15/20 (75%), Positives = 17/20 (85%)
Frame = -1
Query: 502 MPEGTIVSNLEEKMGDRGRM 443
MPEGTIV LEEK GDRG++
Sbjct: 107 MPEGTIVCCLEEKPGDRGKL 126
>UniRef50_Q8ZYF5 Cluster: 50S ribosomal protein L2P; n=6;
Thermoproteales|Rep: 50S ribosomal protein L2P -
Pyrobaculum aerophilum
Length = 246
Score = 79.0 bits (186), Expect = 6e-14
Identities = 35/66 (53%), Positives = 46/66 (69%)
Frame = -3
Query: 446 YARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRA 267
+ARA G +A VIG P+ +T ++LPSG + S R VGIVAGGGRI+KP LKAG+
Sbjct: 118 FARAGGTYAVVIGQKPEENKTIIRLPSGRTVEVDSRGRATVGIVAGGGRIEKPFLKAGKK 177
Query: 266 YHKYRS 249
YH+ R+
Sbjct: 178 YHRARA 183
Score = 47.6 bits (108), Expect = 2e-04
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = -2
Query: 288 YFESWKGIPQVQVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLI 109
+ ++ K + + K +P VRG AM+P HPHGGG+HQ G + V + G+KVG I
Sbjct: 171 FLKAGKKYHRARAKAWKYPTVRGKAMSPYAHPHGGGSHQKGG--TPVPKTAPPGQKVGFI 228
Query: 108 AA 103
+
Sbjct: 229 GS 230
>UniRef50_Q975I4 Cluster: 50S ribosomal protein L2P; n=10;
Archaea|Rep: 50S ribosomal protein L2P - Sulfolobus
tokodaii
Length = 238
Score = 71.7 bits (168), Expect = 9e-12
Identities = 32/51 (62%), Positives = 36/51 (70%)
Frame = -2
Query: 255 QVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 103
+VK WP+VRGVAMN V HPHGGG HQ + + STV R GRKVG IAA
Sbjct: 179 KVKAKKWPHVRGVAMNAVSHPHGGGLHQSVSRPSTVSRNAPPGRKVGHIAA 229
Score = 56.0 bits (129), Expect = 5e-07
Identities = 28/65 (43%), Positives = 41/65 (63%)
Frame = -3
Query: 446 YARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRA 267
+AR++G + V+G D + VKL S + S+ R +VG+VAGGG +KP+LKAG
Sbjct: 117 FARSAGTYGVVVGKTGD--KVLVKLSSEKIAQVSSNARAIVGVVAGGGVTEKPLLKAGNN 174
Query: 266 YHKYR 252
Y KY+
Sbjct: 175 YWKYK 179
>UniRef50_Q9YFN1 Cluster: 50S ribosomal protein L2P; n=3;
Archaea|Rep: 50S ribosomal protein L2P - Aeropyrum
pernix
Length = 238
Score = 70.9 bits (166), Expect = 1e-11
Identities = 33/51 (64%), Positives = 36/51 (70%)
Frame = -2
Query: 255 QVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 103
+VK WP VRGVAMN V+HP GGG HQH G+ STV R GRKVG IAA
Sbjct: 180 KVKARKWPRVRGVAMNAVDHPFGGGRHQHKGRPSTVARTAPPGRKVGHIAA 230
Score = 67.7 bits (158), Expect = 1e-10
Identities = 31/64 (48%), Positives = 46/64 (71%)
Frame = -3
Query: 443 ARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAY 264
AR +G++A V+G +T ++LPSG K +P+ +R +GI AG GRI+KPI+KAG AY
Sbjct: 119 ARQAGSYALVVGRA--GAKTILRLPSGKDKEVPNDSRATIGIPAGAGRIEKPIMKAGFAY 176
Query: 263 HKYR 252
HK++
Sbjct: 177 HKWK 180
>UniRef50_Q8TY93 Cluster: 50S ribosomal protein L2P; n=17;
Euryarchaeota|Rep: 50S ribosomal protein L2P -
Methanopyrus kandleri
Length = 243
Score = 70.1 bits (164), Expect = 3e-11
Identities = 33/62 (53%), Positives = 41/62 (66%)
Frame = -2
Query: 288 YFESWKGIPQVQVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLI 109
+ ++ K ++ K WP VRGVAMN V+HP GGGNHQ GK +T+ RG GRKVG I
Sbjct: 173 FVKAGKKYYHMRSKGGKWPKVRGVAMNAVDHPFGGGNHQSPGKPTTIARGDPPGRKVGHI 232
Query: 108 AA 103
AA
Sbjct: 233 AA 234
Score = 62.5 bits (145), Expect = 5e-09
Identities = 29/66 (43%), Positives = 43/66 (65%)
Frame = -3
Query: 446 YARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRA 267
+ARA G +AT+I H D RT V+LPSG + R +G+++GGG+ +KP +KAG+
Sbjct: 122 FARAPGCYATIIAH--DVGRTYVQLPSGKVRTFDPRCRATIGVMSGGGKREKPFVKAGKK 179
Query: 266 YHKYRS 249
Y+ RS
Sbjct: 180 YYHMRS 185
>UniRef50_Q8TRU4 Cluster: 50S ribosomal protein L2P; n=12;
Archaea|Rep: 50S ribosomal protein L2P - Methanosarcina
acetivorans
Length = 238
Score = 69.3 bits (162), Expect = 5e-11
Identities = 34/66 (51%), Positives = 46/66 (69%)
Frame = -3
Query: 446 YARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRA 267
+ R+SG +ATV+ H +A RT V +PSG K L R +VGIVAG GR+D+P LKAG+
Sbjct: 119 FVRSSGVYATVVTH--EATRTAVSMPSGNIKWLNPKCRAVVGIVAGSGRVDRPWLKAGKK 176
Query: 266 YHKYRS 249
YHK ++
Sbjct: 177 YHKMKT 182
Score = 58.4 bits (135), Expect = 9e-08
Identities = 28/62 (45%), Positives = 39/62 (62%)
Frame = -2
Query: 288 YFESWKGIPQVQVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLI 109
+ ++ K +++ + +P V VAMNP +HP GGG +H GK +TV R GRKVGLI
Sbjct: 170 WLKAGKKYHKMKTRAAKYPRVSAVAMNPRDHPFGGGAWKHPGKPTTVSRNAPPGRKVGLI 229
Query: 108 AA 103
AA
Sbjct: 230 AA 231
>UniRef50_Q8SSM6 Cluster: 60S ribosomal protein L8; n=1;
Encephalitozoon cuniculi|Rep: 60S ribosomal protein L8 -
Encephalitozoon cuniculi
Length = 239
Score = 68.5 bits (160), Expect = 8e-11
Identities = 30/54 (55%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Frame = -2
Query: 261 QVQVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTV-KRGTSAGRKVGLIAA 103
+ + + + +P VRGVAMNPVEH HGGGNHQH+GK +TV K+ S +K+GL+ A
Sbjct: 174 KAKARGHVFPRVRGVAMNPVEHIHGGGNHQHVGKPTTVSKKDISQEQKIGLVGA 227
Score = 64.1 bits (149), Expect = 2e-09
Identities = 29/75 (38%), Positives = 49/75 (65%)
Frame = -3
Query: 449 SYARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGR 270
++A +G+++ V+ H + T +K+PSG K + S R +VG+VAGGG DKP+LKA
Sbjct: 111 TFAMVNGSYSLVVNHRKETNETVIKIPSGKKLTVSSECRCIVGVVAGGGIHDKPLLKASV 170
Query: 269 AYHKYRSNVTAGHMY 225
A++K ++ GH++
Sbjct: 171 AHYKAKAR---GHVF 182
>UniRef50_Q97BX4 Cluster: 50S ribosomal protein L2P; n=4;
Thermoplasmatales|Rep: 50S ribosomal protein L2P -
Thermoplasma volcanium
Length = 234
Score = 68.1 bits (159), Expect = 1e-10
Identities = 30/44 (68%), Positives = 34/44 (77%), Gaps = 1/44 (2%)
Frame = -2
Query: 234 PY-VRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIA 106
PY VRGVAMN V HPHGGGNHQH+G+ STV R GRKVG ++
Sbjct: 181 PYTVRGVAMNAVNHPHGGGNHQHVGRPSTVGRNAPPGRKVGRLS 224
Score = 56.0 bits (129), Expect = 5e-07
Identities = 33/81 (40%), Positives = 43/81 (53%)
Frame = -3
Query: 491 YHCEQS*RENG**RSYARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVA 312
Y+ E S + G + R++G FA V+ H R +KLPSG+ + R VG+VA
Sbjct: 102 YNIESSPGDGG---EFCRSAGTFALVVSHG---SRVTLKLPSGSMRDFDPRCRATVGVVA 155
Query: 311 GGGRIDKPILKAGRAYHKYRS 249
G ID PILKAG H RS
Sbjct: 156 ASGIIDAPILKAGTHVHYLRS 176
>UniRef50_UPI00015BAE9D Cluster: LSU ribosomal protein L2P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L2P - Ignicoccus hospitalis KIN4/I
Length = 251
Score = 67.7 bits (158), Expect = 1e-10
Identities = 31/51 (60%), Positives = 34/51 (66%)
Frame = -2
Query: 255 QVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 103
+ K WP VRGVAMN V HPHGGGNHQ G +TV R G+KVG IAA
Sbjct: 184 KAKAKKWPVVRGVAMNAVNHPHGGGNHQSPGYPTTVARNAPPGQKVGHIAA 234
Score = 56.4 bits (130), Expect = 3e-07
Identities = 26/65 (40%), Positives = 44/65 (67%)
Frame = -3
Query: 443 ARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAY 264
AR+ G +A ++G + ++ ++LPSG K + + R +GI AG GR +KP+LKAG AY
Sbjct: 123 ARSGGAYAILVGKSGNS--AIIQLPSGKVKQVNAKARATIGIAAGAGRDEKPLLKAGNAY 180
Query: 263 HKYRS 249
+K+++
Sbjct: 181 YKWKA 185
>UniRef50_Q3LWH0 Cluster: Ribosomal protein L8; n=1; Bigelowiella
natans|Rep: Ribosomal protein L8 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 281
Score = 67.7 bits (158), Expect = 1e-10
Identities = 30/65 (46%), Positives = 46/65 (70%)
Frame = -3
Query: 443 ARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAY 264
AR++G F V+ H+ T++KLPS K+L S R +G+VAGGG+ +KP+LKAG+ Y
Sbjct: 153 ARSAGAFVGVLSHSKYNNVTKLKLPSKKIKILSSFCRATIGVVAGGGKYEKPLLKAGKNY 212
Query: 263 HKYRS 249
+K++S
Sbjct: 213 YKFKS 217
Score = 58.4 bits (135), Expect = 9e-08
Identities = 26/45 (57%), Positives = 31/45 (68%)
Frame = -2
Query: 237 WPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 103
+P V+ + HPHGGGNHQHIG STV R + G+KVGLIAA
Sbjct: 222 YPIVKIFYLGKENHPHGGGNHQHIGHPSTVSRRSPPGQKVGLIAA 266
>UniRef50_A7DQR3 Cluster: Ribosomal protein L2; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L2
- Candidatus Nitrosopumilus maritimus SCM1
Length = 244
Score = 64.1 bits (149), Expect = 2e-09
Identities = 29/51 (56%), Positives = 34/51 (66%)
Frame = -2
Query: 255 QVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 103
+ K +P VRGVA HPHGGG HQH+G++STV R T G KVG IAA
Sbjct: 182 KAKGKKYPIVRGVAQAAYVHPHGGGRHQHVGQSSTVSRDTPPGAKVGSIAA 232
Score = 49.6 bits (113), Expect = 4e-05
Identities = 23/64 (35%), Positives = 36/64 (56%)
Frame = -3
Query: 440 RASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYH 261
+++G ATV H + VKLPSG L NR M+G +AGGG ++P + AG +
Sbjct: 122 KSAGTDATVFSHGDEG--VTVKLPSGKFTTLNPKNRAMIGTLAGGGASERPFMSAGGKWR 179
Query: 260 KYRS 249
+++
Sbjct: 180 NFKA 183
>UniRef50_A0RZ09 Cluster: Ribosomal protein L2; n=2;
Crenarchaeota|Rep: Ribosomal protein L2 - Cenarchaeum
symbiosum
Length = 243
Score = 62.1 bits (144), Expect = 7e-09
Identities = 27/45 (60%), Positives = 31/45 (68%)
Frame = -2
Query: 237 WPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 103
+P VRGVA HPHGGG HQH+G++STV R G KVG IAA
Sbjct: 187 YPIVRGVAQAAYVHPHGGGRHQHVGQSSTVSRNAPPGAKVGSIAA 231
Score = 49.6 bits (113), Expect = 4e-05
Identities = 25/64 (39%), Positives = 36/64 (56%)
Frame = -3
Query: 440 RASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYH 261
+++G ATV H +KLPSG L NR MVG +AGGG ++P + AG +
Sbjct: 121 KSAGGNATVFSHGEGG--VVLKLPSGRFSTLNPKNRAMVGTLAGGGVSERPFMSAGGKWR 178
Query: 260 KYRS 249
++RS
Sbjct: 179 RFRS 182
>UniRef50_Q95299 Cluster: Ribosomal protein L8; n=1; Sus scrofa|Rep:
Ribosomal protein L8 - Sus scrofa (Pig)
Length = 106
Score = 56.4 bits (130), Expect = 3e-07
Identities = 28/66 (42%), Positives = 38/66 (57%)
Frame = +1
Query: 97 PASSNKTNFATSRCSSLDSGSLTYMLMVTTTVRMLYRVHGNTTYIWPAVTFDLYLWYALP 276
PASSN+T+F SR S D +L+V T+ ML+RVHG+T + WPA+ L L
Sbjct: 17 PASSNETHFPASRGISADGRGFANVLVVATSKGMLHRVHGHTPHAWPAIPLGLILVIGTA 76
Query: 277 AFKIGL 294
+ GL
Sbjct: 77 GLQNGL 82
Score = 33.1 bits (72), Expect = 3.7
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = +3
Query: 255 VLVVCPSSFQNRFVNTSTSSNNTDHASVA*WQNLL 359
+LV+ + QN VN +TSS++TDH+ V +LL
Sbjct: 70 ILVIGTAGLQNGLVNAATSSHHTDHSPVGRGDDLL 104
>UniRef50_P60408 Cluster: 50S ribosomal protein L2P; n=1;
Nanoarchaeum equitans|Rep: 50S ribosomal protein L2P -
Nanoarchaeum equitans
Length = 238
Score = 56.4 bits (130), Expect = 3e-07
Identities = 27/60 (45%), Positives = 41/60 (68%)
Frame = -3
Query: 440 RASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYH 261
RASG+FA ++ D + V+LPSG K L ++ R ++G++AGGGR +KP +KAG Y+
Sbjct: 121 RASGDFALLVQKLGD--KVIVQLPSGQFKTLSANARAVIGVIAGGGRKEKPFVKAGNKYY 178
Score = 46.8 bits (106), Expect = 3e-04
Identities = 21/45 (46%), Positives = 24/45 (53%)
Frame = -2
Query: 237 WPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 103
WP V GV N +HP GG H + K TV + GRKVG I A
Sbjct: 187 WPVVNGVKKNASDHPFGGKRHSNHSKPFTVSKWAPPGRKVGYIGA 231
>UniRef50_Q16XA5 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 719
Score = 50.4 bits (115), Expect = 2e-05
Identities = 30/74 (40%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Frame = +3
Query: 219 HHVHMASSYV*PVLVVCPSSFQNRFVNTSTSSNNTDHASVA*WQNLLGSRR*LYSCTLSI 398
HH+ +ASSY +S Q+ V+T+T+SNNT++ SV WQN L +RR L + T +
Sbjct: 17 HHIPLASSYA-----SSTTSLQDWLVDTTTASNNTNYGSVGRWQNFLDTRRQLVTGTHVL 71
Query: 399 RIVS--NHSGEVSR 434
R+ S N +V R
Sbjct: 72 RLASCQNDQSQVVR 85
>UniRef50_O15574 Cluster: 60S ribosomal protein L8; n=1; Entamoeba
histolytica|Rep: 60S ribosomal protein L8 - Entamoeba
histolytica
Length = 158
Score = 48.8 bits (111), Expect = 7e-05
Identities = 21/29 (72%), Positives = 25/29 (86%)
Frame = -3
Query: 443 ARASGNFATVIGHNPDAKRTRVKLPSGAK 357
ARASGN+ATVI HN D + TR++LPSGAK
Sbjct: 118 ARASGNYATVISHNADNETTRIRLPSGAK 146
>UniRef50_Q9G8Q6 Cluster: Ribosomal protein L2; n=1; Naegleria
gruberi|Rep: Ribosomal protein L2 - Naegleria gruberi
Length = 268
Score = 45.6 bits (103), Expect = 6e-04
Identities = 20/34 (58%), Positives = 23/34 (67%)
Frame = -2
Query: 234 PYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTS 133
P VRGVAMNPV+HPHGGG + KAS + S
Sbjct: 222 PTVRGVAMNPVDHPHGGGEGKKSKKASPTNKWAS 255
>UniRef50_O23283 Cluster: Putative uncharacterized protein; n=1;
Arabidopsis thaliana|Rep: Putative uncharacterized
protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 724
Score = 45.2 bits (102), Expect = 8e-04
Identities = 19/27 (70%), Positives = 22/27 (81%), Gaps = 1/27 (3%)
Frame = -2
Query: 261 QVQVKRNCWPYVRGVAM-NPVEHPHGG 184
++ +KRN W VRGVAM NPVEHPHGG
Sbjct: 411 KLMIKRNMWAKVRGVAMMNPVEHPHGG 437
>UniRef50_P92812 Cluster: Mitochondrial 60S ribosomal protein L2;
n=24; Spermatophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Oryza sativa subsp. japonica (Rice)
Length = 502
Score = 44.8 bits (101), Expect = 0.001
Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Frame = -2
Query: 234 PYVRGVAMNPVEHPHGGGNHQHIGKASTVK---RGTSAGRKVGL 112
P VRGVAMNPV+HPHGGG + G +V + T AG + G+
Sbjct: 452 PIVRGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKPTKAGFRAGV 495
Score = 40.3 bits (90), Expect = 0.024
Identities = 23/70 (32%), Positives = 38/70 (54%)
Frame = -3
Query: 443 ARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAY 264
ARA+G +A +I A + V+LPSG +K++ S R +GIV+ + + KAG++
Sbjct: 389 ARAAGTYAKII--KEPASQCLVRLPSGVEKLIDSRCRATIGIVSNPNHGARKLRKAGQSR 446
Query: 263 HKYRSNVTAG 234
R + G
Sbjct: 447 WSGRRPIVRG 456
>UniRef50_Q8LWZ7 Cluster: Ribosomal protein L2; n=3;
Phaeophyceae|Rep: Ribosomal protein L2 - Laminaria
digitata
Length = 254
Score = 44.0 bits (99), Expect = 0.002
Identities = 18/29 (62%), Positives = 22/29 (75%)
Frame = -2
Query: 234 PYVRGVAMNPVEHPHGGGNHQHIGKASTV 148
P VRGVAMNP++HPHGGG + G S+V
Sbjct: 201 PTVRGVAMNPIDHPHGGGEGKTSGGRSSV 229
>UniRef50_Q9G4C8 Cluster: Ribosomal protein L2; n=1;
Thraustochytrium aureum|Rep: Ribosomal protein L2 -
Thraustochytrium aureum
Length = 236
Score = 43.6 bits (98), Expect = 0.003
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = -2
Query: 246 RNCWPYVRGVAMNPVEHPHGGG 181
RN P VRGVAMNPV+HPHGGG
Sbjct: 190 RNKRPKVRGVAMNPVDHPHGGG 211
>UniRef50_Q8YHN7 Cluster: 50S ribosomal protein L2; n=133; cellular
organisms|Rep: 50S ribosomal protein L2 - Brucella
melitensis
Length = 277
Score = 43.6 bits (98), Expect = 0.003
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = -2
Query: 234 PYVRGVAMNPVEHPHGGGNHQHIG 163
P+VRGVAMNPV+HPHGGG + G
Sbjct: 218 PHVRGVAMNPVDHPHGGGEGRTSG 241
>UniRef50_Q8VZZ8 Cluster: Ribosomal protein L2; n=1; Zea mays|Rep:
Ribosomal protein L2 - Zea mays (Maize)
Length = 448
Score = 43.2 bits (97), Expect = 0.003
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Frame = -2
Query: 234 PYVRGVAMNPVEHPHGGGNHQHIGKASTVK---RGTSAGRKVGLIAA 103
P VRGVAMNPV+HPHGGG + G +V + T AG + +A+
Sbjct: 388 PVVRGVAMNPVDHPHGGGEGRTKGGRPSVSPWGKPTKAGYRSPSVAS 434
Score = 37.1 bits (82), Expect = 0.22
Identities = 24/69 (34%), Positives = 36/69 (52%)
Frame = -3
Query: 440 RASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYH 261
RA+G +A V+ P AK ++LPSGA+K + S +GIV+ + + KAG +
Sbjct: 326 RAAGTYAKVV-QEPGAKCV-LRLPSGAEKAVDSRCHATIGIVSNPSHGTRKLRKAGHSRW 383
Query: 260 KYRSNVTAG 234
R V G
Sbjct: 384 LGRRPVVRG 392
>UniRef50_Q9TAJ4 Cluster: Ribosomal protein L2; n=1; Cafeteria
roenbergensis|Rep: Ribosomal protein L2 - Cafeteria
roenbergensis
Length = 252
Score = 42.7 bits (96), Expect = 0.005
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = -2
Query: 234 PYVRGVAMNPVEHPHGGGNHQHIGKASTVKR 142
P VRGVAMNP++HPHGGG + G +V +
Sbjct: 196 PSVRGVAMNPIDHPHGGGEGKTSGGRPSVSK 226
>UniRef50_P46763 Cluster: Mitochondrial 60S ribosomal protein L2;
n=1; Acanthamoeba castellanii|Rep: Mitochondrial 60S
ribosomal protein L2 - Acanthamoeba castellanii (Amoeba)
Length = 253
Score = 42.7 bits (96), Expect = 0.005
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = -2
Query: 234 PYVRGVAMNPVEHPHGGGNHQHIGKASTV 148
P VRGVAMNPV+HPHGGG + G +V
Sbjct: 199 PVVRGVAMNPVDHPHGGGQGKTSGGRPSV 227
>UniRef50_Q9AIG2 Cluster: Ribosomal protein L2; n=4; Bacteria|Rep:
Ribosomal protein L2 - Carsonella ruddii
Length = 235
Score = 42.3 bits (95), Expect = 0.006
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = -2
Query: 246 RNCWPYVRGVAMNPVEHPHGGGNHQHIG 163
R P VRGVAMNPV+HPHGGG + G
Sbjct: 188 RGIRPTVRGVAMNPVDHPHGGGEGKTSG 215
>UniRef50_Q7YAM0 Cluster: Ribosomal protein L2; n=2;
Streptophytina|Rep: Ribosomal protein L2 - Chara
vulgaris (Common stonewort)
Length = 262
Score = 42.3 bits (95), Expect = 0.006
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = -2
Query: 234 PYVRGVAMNPVEHPHGGGNHQHIGKASTV 148
P VRGVAMNPV+HPHGGG + G +V
Sbjct: 214 PVVRGVAMNPVDHPHGGGEGRTKGGRRSV 242
Score = 34.7 bits (76), Expect = 1.2
Identities = 23/71 (32%), Positives = 35/71 (49%)
Frame = -3
Query: 446 YARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRA 267
+ RA+G FA +I + R++LPSGA + S R +GIV+ + KAG++
Sbjct: 150 FVRAAGTFAQLIQKHEAT--VRLRLPSGALASINSQCRATIGIVSNENHGKRNFRKAGQS 207
Query: 266 YHKYRSNVTAG 234
R V G
Sbjct: 208 RWLGRRPVVRG 218
>UniRef50_Q1XGA1 Cluster: Ribosomal protein L2; n=2; cellular
organisms|Rep: Ribosomal protein L2 - Physcomitrella
patens (Moss)
Length = 463
Score = 42.3 bits (95), Expect = 0.006
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = -2
Query: 234 PYVRGVAMNPVEHPHGGGNHQHIGKASTV 148
P VRGVAMNPV+HPHGGG + G +V
Sbjct: 415 PIVRGVAMNPVDHPHGGGEGRTKGGRPSV 443
Score = 37.9 bits (84), Expect = 0.13
Identities = 23/69 (33%), Positives = 36/69 (52%)
Frame = -3
Query: 440 RASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYH 261
RA+G FA +I + + V+LPSG K++ S R VGIV+ + + KAG++
Sbjct: 351 RAAGTFAQIIKKFENTPQCIVRLPSGVDKLIDSRCRATVGIVSNLHHGKRKLDKAGQSRW 410
Query: 260 KYRSNVTAG 234
R + G
Sbjct: 411 LGRRPIVRG 419
>UniRef50_P26859 Cluster: Mitochondrial 60S ribosomal protein L2;
n=2; Embryophyta|Rep: Mitochondrial 60S ribosomal
protein L2 - Marchantia polymorpha (Liverwort)
Length = 501
Score = 42.3 bits (95), Expect = 0.006
Identities = 18/29 (62%), Positives = 21/29 (72%)
Frame = -2
Query: 234 PYVRGVAMNPVEHPHGGGNHQHIGKASTV 148
P VRGVAMNPV+HPHGGG + G +V
Sbjct: 453 PIVRGVAMNPVDHPHGGGEGRTKGGRPSV 481
Score = 37.9 bits (84), Expect = 0.13
Identities = 22/69 (31%), Positives = 35/69 (50%)
Frame = -3
Query: 440 RASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYH 261
RA+G FA +I + + V+LPSG K++ S R +GIV+ + KAG++
Sbjct: 389 RAAGTFAQIIQKVENTPQCIVRLPSGVDKLIDSRCRATIGIVSNLNHGKRKFNKAGQSRW 448
Query: 260 KYRSNVTAG 234
R + G
Sbjct: 449 LGRRPIVRG 457
>UniRef50_Q605B5 Cluster: 50S ribosomal protein L2; n=396; cellular
organisms|Rep: 50S ribosomal protein L2 - Methylococcus
capsulatus
Length = 281
Score = 42.3 bits (95), Expect = 0.006
Identities = 18/28 (64%), Positives = 20/28 (71%)
Frame = -2
Query: 246 RNCWPYVRGVAMNPVEHPHGGGNHQHIG 163
R P VRGVAMNPV+HPHGGG + G
Sbjct: 220 RGVRPTVRGVAMNPVDHPHGGGEGRTSG 247
>UniRef50_Q9AIM8 Cluster: Ribosomal protein L2; n=2; Candidatus
Carsonella ruddii|Rep: Ribosomal protein L2 - Carsonella
ruddii
Length = 235
Score = 41.9 bits (94), Expect = 0.008
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = -2
Query: 234 PYVRGVAMNPVEHPHGGGNHQHIG 163
P VRGVAMNPV+HPHGGG + G
Sbjct: 192 PTVRGVAMNPVDHPHGGGEGKTSG 215
>UniRef50_A6YEA9 Cluster: Ribosomal protein L2; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein L2 - Chlorokybus
atmophyticus (Soil alga)
Length = 368
Score = 41.9 bits (94), Expect = 0.008
Identities = 17/29 (58%), Positives = 21/29 (72%)
Frame = -2
Query: 234 PYVRGVAMNPVEHPHGGGNHQHIGKASTV 148
P VRGVAMNP++HPHGGG + G +V
Sbjct: 312 PTVRGVAMNPIDHPHGGGEGRTSGGRPSV 340
>UniRef50_O66434 Cluster: 50S ribosomal protein L2; n=113; cellular
organisms|Rep: 50S ribosomal protein L2 - Aquifex
aeolicus
Length = 304
Score = 41.9 bits (94), Expect = 0.008
Identities = 16/25 (64%), Positives = 19/25 (76%)
Frame = -2
Query: 234 PYVRGVAMNPVEHPHGGGNHQHIGK 160
P+ RG AMNPV+HPHGGG + GK
Sbjct: 245 PHTRGTAMNPVDHPHGGGEGRTRGK 269
>UniRef50_Q41912 Cluster: 50S ribosomal protein L2; n=10;
Magnoliophyta|Rep: 50S ribosomal protein L2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 144
Score = 41.5 bits (93), Expect = 0.010
Identities = 17/24 (70%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
Frame = -2
Query: 240 CW----PYVRGVAMNPVEHPHGGG 181
CW P VRGV MNPV+HPHGGG
Sbjct: 80 CWLGKRPVVRGVVMNPVDHPHGGG 103
>UniRef50_A7NTF6 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 148
Score = 41.5 bits (93), Expect = 0.010
Identities = 17/24 (70%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
Frame = -2
Query: 240 CW----PYVRGVAMNPVEHPHGGG 181
CW P VRGV MNPV+HPHGGG
Sbjct: 84 CWLGKRPVVRGVVMNPVDHPHGGG 107
>UniRef50_P56791 Cluster: Chloroplast 50S ribosomal protein L2;
n=423; cellular organisms|Rep: Chloroplast 50S ribosomal
protein L2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 274
Score = 41.5 bits (93), Expect = 0.010
Identities = 17/24 (70%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
Frame = -2
Query: 240 CW----PYVRGVAMNPVEHPHGGG 181
CW P VRGV MNPV+HPHGGG
Sbjct: 210 CWLGKRPVVRGVVMNPVDHPHGGG 233
>UniRef50_Q2WGE5 Cluster: Ribosomal protein L2; n=5;
Tracheophyta|Rep: Ribosomal protein L2 - Selaginella
uncinata (Blue spikemoss) (Peacock spikemoss)
Length = 282
Score = 39.9 bits (89), Expect = 0.032
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -2
Query: 234 PYVRGVAMNPVEHPHGGG 181
P VRGV MNPV+HPHGGG
Sbjct: 218 PRVRGVVMNPVDHPHGGG 235
>UniRef50_Q9G918 Cluster: Ribosomal protein L2; n=1; Ochromonas
danica|Rep: Ribosomal protein L2 - Ochromonas danica
Length = 261
Score = 39.5 bits (88), Expect = 0.042
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = -2
Query: 234 PYVRGVAMNPVEHPHGG 184
P VRGVAMNPV+HPHGG
Sbjct: 220 PIVRGVAMNPVDHPHGG 236
Score = 32.7 bits (71), Expect = 4.8
Identities = 21/71 (29%), Positives = 36/71 (50%)
Frame = -3
Query: 446 YARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRA 267
Y +++GNFA +I D + ++KLPSG P ++ +G ++ + I KAGR
Sbjct: 156 YVKSAGNFAELI--QKDTENAKLKLPSGKIIKHPITSLATIGSISNEQLRNIVIGKAGRN 213
Query: 266 YHKYRSNVTAG 234
+ R + G
Sbjct: 214 RNLGRRPIVRG 224
>UniRef50_Q39213 Cluster: Ribosomal protein L2; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L2 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 169
Score = 39.5 bits (88), Expect = 0.042
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = -2
Query: 234 PYVRGVAMNPVEHPHGGG 181
P VRGVAMNP +HPHGGG
Sbjct: 107 PKVRGVAMNPCDHPHGGG 124
>UniRef50_Q2LCR9 Cluster: Ribosomal protein L2; n=3;
Dictyosteliida|Rep: Ribosomal protein L2 - Dictyostelium
citrinum
Length = 266
Score = 39.5 bits (88), Expect = 0.042
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = -2
Query: 249 KRNCWPYVRGVAMNPVEHPHGG 184
K+ P VRG+AMNPV+HPHGG
Sbjct: 196 KKGIRPIVRGLAMNPVDHPHGG 217
>UniRef50_Q9MG94 Cluster: Ribosomal protein L2; n=2; Chrysodidymus
synuroideus|Rep: Ribosomal protein L2 - Chrysodidymus
synuroideus
Length = 262
Score = 38.7 bits (86), Expect = 0.074
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -2
Query: 234 PYVRGVAMNPVEHPHGG 184
P VRG+AMNPV+HPHGG
Sbjct: 220 PSVRGIAMNPVDHPHGG 236
>UniRef50_Q7YN79 Cluster: Ribosomal protein L2; n=1; Eimeria
tenella|Rep: Ribosomal protein L2 - Eimeria tenella
Length = 273
Score = 38.7 bits (86), Expect = 0.074
Identities = 17/28 (60%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = -2
Query: 234 PYVRGVAMNPVEHPHGGGNHQH-IGKAS 154
P VRGVAMN +HPHGGG ++ IG++S
Sbjct: 213 PKVRGVAMNACDHPHGGGEGKNSIGRSS 240
>UniRef50_A4Q378 Cluster: Translation protein SH3-like; n=1;
Medicago truncatula|Rep: Translation protein SH3-like -
Medicago truncatula (Barrel medic)
Length = 52
Score = 38.3 bits (85), Expect = 0.097
Identities = 19/39 (48%), Positives = 23/39 (58%)
Frame = -2
Query: 228 VRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGL 112
VRGV MNPV+HPHGGG G+A K+ +GL
Sbjct: 11 VRGVVMNPVDHPHGGGE----GRAPIDKKKKKTLNSLGL 45
>UniRef50_A2Q9C8 Cluster: Contig An01c0260, complete genome.
precursor; n=9; Pezizomycotina|Rep: Contig An01c0260,
complete genome. precursor - Aspergillus niger
Length = 414
Score = 37.9 bits (84), Expect = 0.13
Identities = 16/27 (59%), Positives = 18/27 (66%)
Frame = -2
Query: 243 NCWPYVRGVAMNPVEHPHGGGNHQHIG 163
N P VRG+AMN EHPHGGG + G
Sbjct: 303 NIRPTVRGLAMNAAEHPHGGGRGKSKG 329
>UniRef50_Q4UCG9 Cluster: 50S ribosomal protein L2, putative; n=8;
Aconoidasida|Rep: 50S ribosomal protein L2, putative -
Theileria annulata
Length = 334
Score = 37.5 bits (83), Expect = 0.17
Identities = 17/26 (65%), Positives = 19/26 (73%), Gaps = 2/26 (7%)
Frame = -2
Query: 249 KRNC-W-PYVRGVAMNPVEHPHGGGN 178
+RN W P VRG+AMN HPHGGGN
Sbjct: 258 RRNMGWRPVVRGIAMNANSHPHGGGN 283
>UniRef50_A7CUV2 Cluster: Ribosomal protein L2; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein L2 - Opitutaceae
bacterium TAV2
Length = 288
Score = 37.1 bits (82), Expect = 0.22
Identities = 17/32 (53%), Positives = 21/32 (65%), Gaps = 4/32 (12%)
Frame = -2
Query: 246 RNCW----PYVRGVAMNPVEHPHGGGNHQHIG 163
RN W P VRG+ MNPV+HP+GGG + G
Sbjct: 213 RNRWLGKRPRVRGMVMNPVDHPNGGGQGKSKG 244
>UniRef50_Q9MTE5 Cluster: Ribosomal protein L2; n=1; Toxoplasma
gondii|Rep: Ribosomal protein L2 - Toxoplasma gondii
Length = 267
Score = 37.1 bits (82), Expect = 0.22
Identities = 17/27 (62%), Positives = 19/27 (70%)
Frame = -2
Query: 234 PYVRGVAMNPVEHPHGGGNHQHIGKAS 154
P +RG AMN V+HPHGGG GKAS
Sbjct: 210 PKIRGAAMNAVDHPHGGGE----GKAS 232
>UniRef50_Q951B6 Cluster: Ribosomal protein L2; n=5;
Tetrahymena|Rep: Ribosomal protein L2 - Tetrahymena
thermophila
Length = 262
Score = 37.1 bits (82), Expect = 0.22
Identities = 14/15 (93%), Positives = 15/15 (100%)
Frame = -2
Query: 228 VRGVAMNPVEHPHGG 184
VRGVAMNPV+HPHGG
Sbjct: 228 VRGVAMNPVDHPHGG 242
>UniRef50_Q6F1Z1 Cluster: 50S ribosomal protein L2; n=7; cellular
organisms|Rep: 50S ribosomal protein L2 - Mesoplasma
florum (Acholeplasma florum)
Length = 281
Score = 37.1 bits (82), Expect = 0.22
Identities = 20/38 (52%), Positives = 22/38 (57%), Gaps = 5/38 (13%)
Frame = -2
Query: 246 RNCW----PYVRGVAMNPVEHPHGGG-NHQHIGKASTV 148
RN W P VRG MNP +HPHGGG IG+ S V
Sbjct: 213 RNRWRGIRPTVRGSVMNPNDHPHGGGEGRTPIGRKSPV 250
>UniRef50_A3LNH9 Cluster: Predicted protein; n=5;
Saccharomycetaceae|Rep: Predicted protein - Pichia
stipitis (Yeast)
Length = 364
Score = 36.7 bits (81), Expect = 0.30
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -2
Query: 234 PYVRGVAMNPVEHPHGGG 181
P VRGVAMN +HPHGGG
Sbjct: 308 PMVRGVAMNAFDHPHGGG 325
Score = 35.5 bits (78), Expect = 0.69
Identities = 18/69 (26%), Positives = 36/69 (52%)
Frame = -3
Query: 440 RASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYH 261
+A+G FA ++ +P+ K+ +KL SG + + + +G+V+ KAGR+ H
Sbjct: 244 KAAGTFARLLSKHPEEKKVVIKLSSGEHRYVHMNCHATLGVVSNKEHQAISWGKAGRSRH 303
Query: 260 KYRSNVTAG 234
+ + + G
Sbjct: 304 RGKRPMVRG 312
>UniRef50_A1CWB9 Cluster: 50S ribosomal protein L2; n=6;
Eurotiomycetidae|Rep: 50S ribosomal protein L2 -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 404
Score = 36.7 bits (81), Expect = 0.30
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = -2
Query: 243 NCWPYVRGVAMNPVEHPHGGGNHQHIG 163
N P VRG+AMN +HPHGGG + G
Sbjct: 334 NIRPTVRGLAMNAADHPHGGGRGKSKG 360
>UniRef50_P75577 Cluster: 50S ribosomal protein L2; n=17;
Bacteria|Rep: 50S ribosomal protein L2 - Mycoplasma
pneumoniae
Length = 287
Score = 36.7 bits (81), Expect = 0.30
Identities = 15/22 (68%), Positives = 16/22 (72%)
Frame = -2
Query: 246 RNCWPYVRGVAMNPVEHPHGGG 181
R P VRG AMNP +HPHGGG
Sbjct: 222 RGIRPTVRGSAMNPNDHPHGGG 243
>UniRef50_Q5KGY0 Cluster: Ribosomal protein L2, putative; n=2;
Filobasidiella neoformans|Rep: Ribosomal protein L2,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 481
Score = 36.3 bits (80), Expect = 0.39
Identities = 17/32 (53%), Positives = 20/32 (62%), Gaps = 4/32 (12%)
Frame = -2
Query: 246 RNCW----PYVRGVAMNPVEHPHGGGNHQHIG 163
RN W P+VRG AMN V+H HGGG + G
Sbjct: 408 RNRWLGRRPHVRGAAMNSVDHAHGGGRGKSKG 439
>UniRef50_Q4P5V2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 467
Score = 36.3 bits (80), Expect = 0.39
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -2
Query: 234 PYVRGVAMNPVEHPHGGG 181
P VRGVAMN +HPHGGG
Sbjct: 400 PKVRGVAMNACDHPHGGG 417
>UniRef50_P32611 Cluster: 54S ribosomal protein RML2, mitochondrial
precursor; n=6; Ascomycota|Rep: 54S ribosomal protein
RML2, mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 393
Score = 36.3 bits (80), Expect = 0.39
Identities = 14/18 (77%), Positives = 15/18 (83%)
Frame = -2
Query: 234 PYVRGVAMNPVEHPHGGG 181
P VRGVAMN +HPHGGG
Sbjct: 331 PTVRGVAMNKCDHPHGGG 348
Score = 34.7 bits (76), Expect = 1.2
Identities = 16/60 (26%), Positives = 33/60 (55%)
Frame = -3
Query: 446 YARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRA 267
+ R++G +A V+ P+ K+ V+L SG + + +G+V+ ++ + KAGR+
Sbjct: 265 FCRSAGTYARVLAKLPEKKKAIVRLQSGEHRYVSLEAVATIGVVSNIDHQNRSLGKAGRS 324
>UniRef50_P15765 Cluster: Mitochondrial 60S ribosomal protein L2;
n=1; Paramecium tetraurelia|Rep: Mitochondrial 60S
ribosomal protein L2 - Paramecium tetraurelia
Length = 259
Score = 36.3 bits (80), Expect = 0.39
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -2
Query: 234 PYVRGVAMNPVEHPHGG 184
P VRGVAMNPV+HP+GG
Sbjct: 229 PRVRGVAMNPVDHPNGG 245
>UniRef50_A7AXH0 Cluster: Rpl2; n=1; Babesia bovis|Rep: Rpl2 -
Babesia bovis
Length = 242
Score = 35.1 bits (77), Expect = 0.91
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -2
Query: 255 QVKRNCWPYVRGVAMNPVEHPHGGG 181
++K P VRG AMN +HPHGGG
Sbjct: 189 KIKLGRRPKVRGTAMNACDHPHGGG 213
>UniRef50_A5DY19 Cluster: 60S ribosomal protein RML2, mitochondrial;
n=2; Saccharomycetales|Rep: 60S ribosomal protein RML2,
mitochondrial - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 376
Score = 35.1 bits (77), Expect = 0.91
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -2
Query: 234 PYVRGVAMNPVEHPHGGG 181
P VRG+AMN +HPHGGG
Sbjct: 316 PVVRGMAMNAKDHPHGGG 333
>UniRef50_A3DC11 Cluster: Transglutaminase-like protein precursor;
n=1; Clostridium thermocellum ATCC 27405|Rep:
Transglutaminase-like protein precursor - Clostridium
thermocellum (strain ATCC 27405 / DSM 1237)
Length = 851
Score = 34.7 bits (76), Expect = 1.2
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +1
Query: 208 VHGNTTYIWPAVTFDLYLWYALPAFKIGLSIRPPPATIPTMPLLLDGRT 354
V+ + YI+P + F+ Y W + F + RPP TI T DG T
Sbjct: 388 VYADQVYIYPEIKFEDYGWVPMDVFPYDVFYRPPKETI-TQITFADGTT 435
>UniRef50_Q88XY3 Cluster: 50S ribosomal protein L2; n=90;
Bacteria|Rep: 50S ribosomal protein L2 - Lactobacillus
plantarum
Length = 279
Score = 34.7 bits (76), Expect = 1.2
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = -2
Query: 234 PYVRGVAMNPVEHPHGGG 181
P VRG MNP +HPHGGG
Sbjct: 218 PTVRGSVMNPNDHPHGGG 235
>UniRef50_Q9Z543 Cluster: Putative DNA-binding protein; n=1;
Streptomyces coelicolor|Rep: Putative DNA-binding
protein - Streptomyces coelicolor
Length = 303
Score = 34.3 bits (75), Expect = 1.6
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = -2
Query: 258 VQVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 103
V +++ WPY+R V + E GG +G +T +R SA + VG + A
Sbjct: 2 VMMEQCAWPYIRSVRVRVGERTRAGGEFDLMG--TTTRRNASAMKMVGALLA 51
>UniRef50_Q4MYC0 Cluster: Ribosomal protein L2, putative; n=1;
Theileria parva|Rep: Ribosomal protein L2, putative -
Theileria parva
Length = 246
Score = 34.3 bits (75), Expect = 1.6
Identities = 16/28 (57%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = -2
Query: 234 PYVRGVAMNPVEHPHGGGNHQ-HIGKAS 154
P VRG AMN +HPHGGG + IG+ S
Sbjct: 196 PKVRGSAMNACDHPHGGGEGKAPIGRRS 223
>UniRef50_Q5DUX7 Cluster: Hydrogenosomal 60S ribosomal protein L2;
n=1; Nyctotherus ovalis|Rep: Hydrogenosomal 60S
ribosomal protein L2 - Nyctotherus ovalis
Length = 290
Score = 34.3 bits (75), Expect = 1.6
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -2
Query: 252 VKRNCWPYVRGVAMNPVEHPHGG 184
V R P VRG+ NPV+HP+GG
Sbjct: 251 VNRGIKPQVRGIVKNPVDHPNGG 273
>UniRef50_UPI0000ECA55B Cluster: UPI0000ECA55B related cluster; n=1;
Gallus gallus|Rep: UPI0000ECA55B UniRef100 entry -
Gallus gallus
Length = 203
Score = 33.1 bits (72), Expect = 3.7
Identities = 18/72 (25%), Positives = 28/72 (38%)
Frame = -2
Query: 318 CCWRWTY*QTYFESWKGIPQVQVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRG 139
CCW + T +W+G +R CW V HG G H + + T G
Sbjct: 11 CCWLSS--STTSPAWRGHGVHARRRQCWDSVGWQWGAGQSRQHGAGPHPDVPSSGTGSNG 68
Query: 138 TSAGRKVGLIAA 103
R+ G++ +
Sbjct: 69 VRCTRQGGVVGS 80
>UniRef50_Q4T4P2 Cluster: Chromosome 9 SCAF9570, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 9 SCAF9570, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 1023
Score = 33.1 bits (72), Expect = 3.7
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +1
Query: 274 PAFKIGLSIRPPPATIPTMPLLLDGRTFLAPDGSFTLVRLASGLCPIT-VAKFPEARAYD 450
P +GL + P ++IPT +D +FL + + LC +T V KFPE +
Sbjct: 310 PGLLLGLQVMIPLSSIPTYSASMDSSSFLKTSFNKFPYPTKAELCYLTVVTKFPEEQIKI 369
Query: 451 LYHPFSLQDCSQWYPQ 498
+ L+ W P+
Sbjct: 370 WFTAQRLKQGISWSPE 385
>UniRef50_Q12FX3 Cluster: Spore coat U; n=1; Polaromonas sp.
JS666|Rep: Spore coat U - Polaromonas sp. (strain JS666
/ ATCC BAA-500)
Length = 324
Score = 33.1 bits (72), Expect = 3.7
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +2
Query: 104 AAIRPTLRPADVPLLTVEALPIC*WLPPP*GCS---TGFMATPRTYGQQLRLTCTCGMPF 274
+ + T PA +P++ + P C + PP S T F +T T Q CT G+P+
Sbjct: 201 SGVNATATPATMPVI-ITTNPQCQFSTPPGTMSFSYTSFQSTAATGSTQFATRCTSGLPY 259
Query: 275 QLS 283
+S
Sbjct: 260 TMS 262
>UniRef50_A1SQS0 Cluster: Putative uncharacterized protein
precursor; n=1; Nocardioides sp. JS614|Rep: Putative
uncharacterized protein precursor - Nocardioides sp.
(strain BAA-499 / JS614)
Length = 400
Score = 33.1 bits (72), Expect = 3.7
Identities = 22/55 (40%), Positives = 26/55 (47%)
Frame = +1
Query: 310 PATIPTMPLLLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEARAYDLYHPFSLQ 474
P +PT LD RT DG TL RLA+G+ T A A D PF+ Q
Sbjct: 223 PDEVPTYRCRLDDRTVACTDGLTTLRRLAAGMHRFTAASVDPAGNVD-PTPFAQQ 276
>UniRef50_A6R0K7 Cluster: Predicted protein; n=2;
Pezizomycotina|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 325
Score = 32.7 bits (71), Expect = 4.8
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = -2
Query: 432 WKLRHCDWTQS*C*AYKSKATVWSQEGSAIKQQRHGRYCCWR 307
W L H DWT K +WS E S I R G Y WR
Sbjct: 48 WCLDHQDWTLE-----DWKRVIWSDEASVILLHRRGGYRIWR 84
>UniRef50_Q9JAD5 Cluster: Polyprotein; n=68; Flavivirus|Rep:
Polyprotein - Rio Bravo virus
Length = 3379
Score = 32.3 bits (70), Expect = 6.4
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 1/81 (1%)
Frame = -3
Query: 464 NG**RSYARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPI 285
NG R + R G V + PD K T +L G+ KV G++ + G PI
Sbjct: 1543 NGGWRLFTRWDGTEVQVHAYTPDGKVTTTQLLPGSMKVEGGLELGLIPLDFPPGSSGSPI 1602
Query: 284 LKA-GRAYHKYRSNVTAGHMY 225
+ + G+ Y + V G Y
Sbjct: 1603 ISSDGKIIGLYGNGVLHGDTY 1623
>UniRef50_Q7NIR0 Cluster: Phosphoribulokinase; n=1; Gloeobacter
violaceus|Rep: Phosphoribulokinase - Gloeobacter
violaceus
Length = 345
Score = 32.3 bits (70), Expect = 6.4
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 274 PAFKIGLSIRPPPATIPTMPLLLDGRTFLAPD 369
P +K+ L ++P P +PT+PL D LA D
Sbjct: 229 PCYKVELILQPAPVPLPTLPLPFDLAAMLAVD 260
>UniRef50_A7PDE5 Cluster: Chromosome chr17 scaffold_12, whole genome
shotgun sequence; n=5; eudicotyledons|Rep: Chromosome
chr17 scaffold_12, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 126
Score = 32.3 bits (70), Expect = 6.4
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = -2
Query: 228 VRGVAMNPVEHPHGGG 181
VRGV MNPV+HPH G
Sbjct: 70 VRGVVMNPVDHPHRSG 85
>UniRef50_Q556C6 Cluster: G-protein-coupled receptor (GPCR) family
protein; n=2; Dictyostelium discoideum|Rep:
G-protein-coupled receptor (GPCR) family protein -
Dictyostelium discoideum AX4
Length = 621
Score = 32.3 bits (70), Expect = 6.4
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Frame = +3
Query: 213 WQHHVHMASSYV*PVLVVCPSSFQNRF---VNTSTSSNNT 323
W+ + + +++V P++ SSF NRF NTST+ N+T
Sbjct: 549 WKESIILNNAFVTPIIKFIDSSFSNRFSSSKNTSTTQNST 588
>UniRef50_Q0CD71 Cluster: Predicted protein; n=3;
Trichocomaceae|Rep: Predicted protein - Aspergillus
terreus (strain NIH 2624)
Length = 471
Score = 32.3 bits (70), Expect = 6.4
Identities = 20/42 (47%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +1
Query: 301 RPPPA---TIPTMPLLLDGRTFLAPDGSFTLVRLASGLCPIT 417
R PP T+PT PL LDGRT +G LVR+A L +T
Sbjct: 3 REPPQSQETVPTSPLDLDGRTL---EGGGQLVRIAVALAALT 41
>UniRef50_Q25807 Cluster: Rpl2 protein; n=2; Plasmodium|Rep: Rpl2
protein - Plasmodium falciparum
Length = 245
Score = 31.9 bits (69), Expect = 8.5
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -2
Query: 243 NCWPYVRGVAMNPVEHPHGGG 181
N P VRG A N +HPHGGG
Sbjct: 199 NIKPKVRGKAKNVCDHPHGGG 219
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 517,483,981
Number of Sequences: 1657284
Number of extensions: 11037217
Number of successful extensions: 33551
Number of sequences better than 10.0: 76
Number of HSP's better than 10.0 without gapping: 32276
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33532
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 30110042232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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