Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00572X
         (505 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...   123   4e-30
AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.         27   0.27 
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    25   1.9  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   4.5  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           23   4.5  
AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP prot...    23   5.9  

>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score =  123 bits (296), Expect = 4e-30
 Identities = 56/64 (87%), Positives = 60/64 (93%)
 Frame = -3

Query: 443 ARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAY 264
           AR SGN+A+VI HNPD KRTRVKLPSGAKKVLPS+NR MVGIVAGGGRIDKPILKAGRAY
Sbjct: 127 ARTSGNYASVIAHNPDTKRTRVKLPSGAKKVLPSANRAMVGIVAGGGRIDKPILKAGRAY 186

Query: 263 HKYR 252
           HKY+
Sbjct: 187 HKYK 190



 Score =  107 bits (257), Expect = 2e-25
 Identities = 47/51 (92%), Positives = 48/51 (94%)
 Frame = -2

Query: 255 QVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 103
           +VKRNCWP VRGVAMNPVEHPHGGGNHQHIGKASTVKRGT  GRKVGLIAA
Sbjct: 190 KVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTPPGRKVGLIAA 240



 Score = 38.7 bits (86), Expect = 1e-04
 Identities = 16/20 (80%), Positives = 18/20 (90%)
 Frame = -1

Query: 502 MPEGTIVSNLEEKMGDRGRM 443
           MPEGTIV NLEEK GDRG++
Sbjct: 107 MPEGTIVCNLEEKTGDRGKL 126


>AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.
          Length = 144

 Score = 27.5 bits (58), Expect = 0.27
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -3

Query: 344 SSNRGMVGIVAGGGRIDKPILKAGRAYHK 258
           S+ +  +G V GG   D  IL  GRAYH+
Sbjct: 81  SAGQVPLGAVVGGHTSDGEILYVGRAYHE 109


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = -2

Query: 342 KQQRHGRYCCWRWTY 298
           +QQ+HG++CC R ++
Sbjct: 280 QQQQHGQHCCCRGSH 294


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -2

Query: 264  PQVQVKRNCWPYVRGVAMNPVEHPHG 187
            P+++V  N +P   G   + VE P G
Sbjct: 1822 PEIKVLANIFPVAEGYRQSIVERPGG 1847


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 23.4 bits (48), Expect = 4.5
 Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
 Frame = +1

Query: 397  SGLCPIT---VAKFPEARAYDLYHPFSLQD 477
            SGLC  +   V ++ + R YD Y  +SLQD
Sbjct: 1056 SGLCYKSGTFVNEYDKDRLYDAYITYSLQD 1085


>AJ439060-4|CAD27755.1|  151|Anopheles gambiae putative sRNP
           protein.
          Length = 151

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 292 LSIRPPPATIPTM 330
           + +RPPP  +PTM
Sbjct: 114 MGMRPPPMMVPTM 126


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 547,191
Number of Sequences: 2352
Number of extensions: 11699
Number of successful extensions: 22
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 45245913
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)