Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00572X
         (505 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81453-1|CAB03792.1|  260|Caenorhabditis elegans Hypothetical pr...   113   9e-26
Z83219-8|CAD57688.1|  455|Caenorhabditis elegans Hypothetical pr...    30   1.1  
Z83219-7|CAB05698.2|  473|Caenorhabditis elegans Hypothetical pr...    30   1.1  
Z80217-11|CAD57698.1|  455|Caenorhabditis elegans Hypothetical p...    30   1.1  
Z80217-10|CAB02296.2|  473|Caenorhabditis elegans Hypothetical p...    30   1.1  
Z68338-1|CAA92757.1|  134|Caenorhabditis elegans Hypothetical pr...    28   3.3  
AF099920-1|AAZ91353.1|   69|Caenorhabditis elegans Hypothetical ...    27   5.8  

>Z81453-1|CAB03792.1|  260|Caenorhabditis elegans Hypothetical
           protein B0250.1 protein.
          Length = 260

 Score =  113 bits (271), Expect = 9e-26
 Identities = 48/65 (73%), Positives = 59/65 (90%)
 Frame = -3

Query: 443 ARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAY 264
           ARASGN+ATVI HNPD K+TR++LPSGAKKV+ S NR M+G+VAGGGR DKP+LKAGR+Y
Sbjct: 127 ARASGNYATVIAHNPDTKKTRIRLPSGAKKVVQSVNRAMIGLVAGGGRTDKPLLKAGRSY 186

Query: 263 HKYRS 249
           HKY++
Sbjct: 187 HKYKA 191



 Score = 94.3 bits (224), Expect = 4e-20
 Identities = 41/51 (80%), Positives = 44/51 (86%)
 Frame = -2

Query: 255 QVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 103
           + KRN WP VRGVAMNPVEHPHGGGNHQHIG  STV+R  SAG+KVGLIAA
Sbjct: 190 KAKRNSWPRVRGVAMNPVEHPHGGGNHQHIGHPSTVRRDASAGKKVGLIAA 240



 Score = 30.3 bits (65), Expect = 0.83
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -1

Query: 502 MPEGTIVSNLEEKMGDRG 449
           +PEGT + N+E K GDRG
Sbjct: 107 LPEGTTICNVENKSGDRG 124


>Z83219-8|CAD57688.1|  455|Caenorhabditis elegans Hypothetical
           protein C31C9.1b protein.
          Length = 455

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = +1

Query: 325 TMPLLLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEARAYDLYHPFSLQ 474
           T  L  DG +F  PDG   + R +       +AK+ +  +Y+L  P +++
Sbjct: 256 TNELGYDGGSFFTPDGKRLIFRASRPKNETEIAKYKKLLSYNLVEPIAME 305


>Z83219-7|CAB05698.2|  473|Caenorhabditis elegans Hypothetical
           protein C31C9.1a protein.
          Length = 473

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = +1

Query: 325 TMPLLLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEARAYDLYHPFSLQ 474
           T  L  DG +F  PDG   + R +       +AK+ +  +Y+L  P +++
Sbjct: 256 TNELGYDGGSFFTPDGKRLIFRASRPKNETEIAKYKKLLSYNLVEPIAME 305


>Z80217-11|CAD57698.1|  455|Caenorhabditis elegans Hypothetical
           protein C31C9.1b protein.
          Length = 455

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = +1

Query: 325 TMPLLLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEARAYDLYHPFSLQ 474
           T  L  DG +F  PDG   + R +       +AK+ +  +Y+L  P +++
Sbjct: 256 TNELGYDGGSFFTPDGKRLIFRASRPKNETEIAKYKKLLSYNLVEPIAME 305


>Z80217-10|CAB02296.2|  473|Caenorhabditis elegans Hypothetical
           protein C31C9.1a protein.
          Length = 473

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 14/50 (28%), Positives = 25/50 (50%)
 Frame = +1

Query: 325 TMPLLLDGRTFLAPDGSFTLVRLASGLCPITVAKFPEARAYDLYHPFSLQ 474
           T  L  DG +F  PDG   + R +       +AK+ +  +Y+L  P +++
Sbjct: 256 TNELGYDGGSFFTPDGKRLIFRASRPKNETEIAKYKKLLSYNLVEPIAME 305


>Z68338-1|CAA92757.1|  134|Caenorhabditis elegans Hypothetical
           protein T24B8.1 protein.
          Length = 134

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 14/22 (63%), Positives = 16/22 (72%)
 Frame = -3

Query: 413 IGHNPDAKRTRVKLPSGAKKVL 348
           IGH  D +RTR  LP+G KKVL
Sbjct: 57  IGHGSD-RRTRFVLPNGYKKVL 77


>AF099920-1|AAZ91353.1|   69|Caenorhabditis elegans Hypothetical
           protein H06H21.11 protein.
          Length = 69

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
 Frame = +1

Query: 322 PTMPLLLDGRTFLAPDG-SFTLVRLASGLCPITVA--KFPEARAYDLYHPFSLQDCS 483
           PT+   L+G+  +AP G S  L RL S L  +  A    PE  + D +H  +++D S
Sbjct: 5   PTISNFLNGKPIIAPVGPSSLLTRLQSFLPQMEEANRNMPENASADAFHIENVEDDS 61


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,710,845
Number of Sequences: 27780
Number of extensions: 252944
Number of successful extensions: 717
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 716
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)