Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00568X
         (459 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsiv...    24   2.2  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   3.9  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    23   5.1  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    23   5.1  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   6.8  
AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.         22   9.0  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           22   9.0  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    22   9.0  

>AY496420-1|AAS80137.1|  447|Anopheles gambiae bacteria responsive
           protein 1 protein.
          Length = 447

 Score = 24.2 bits (50), Expect = 2.2
 Identities = 14/48 (29%), Positives = 19/48 (39%)
 Frame = +1

Query: 133 AGCSQAPPVRVQGAHPSGPGQ*CSRFYVQELEAALLREQGGGHQTSAE 276
           +G +  PP+   G  P+GP      FY      A L   G  +   AE
Sbjct: 317 SGITGVPPIPADGPSPAGPYTNVPGFYSFGEVCAKLPNPGNANLKGAE 364


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.4 bits (48), Expect = 3.9
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -3

Query: 358 RRHPDRTYEYHHHGH 314
           ++HP  +  +HHH H
Sbjct: 175 QQHPGHSQHHHHHHH 189


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
 Frame = -3

Query: 361 YRRHPDRTYEYHHH--GHAEFGRQHVQYPMIQ 272
           +  HP   + +HHH    A+    H Q+ +IQ
Sbjct: 498 HHAHPHHHHHHHHHHPTAADLAGYHHQHNVIQ 529


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 23.0 bits (47), Expect = 5.1
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = +1

Query: 127 DGAGCSQAPPVRVQGAHPSGPG 192
           DG     +PP+ V G+  S PG
Sbjct: 153 DGLHSIPSPPITVSGSDMSSPG 174


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 22.6 bits (46), Expect = 6.8
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 151 PPVRVQGAHPSGPGQ 195
           PP+ +QG  P GP Q
Sbjct: 300 PPMPMQGGAPGGPPQ 314


>AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 18/64 (28%), Positives = 28/64 (43%)
 Frame = -3

Query: 349 PDRTYEYHHHGHAEFGRQHVQYPMIQHWFGDHLLAHAVGLPRVLGHRNVNIIDQVRTDGR 170
           PD+T  Y  +G  E   +HV+  + +    D   A  V L  V+G    +   ++   GR
Sbjct: 48  PDKTAAYVAYGGQETLVEHVEVLVHKQLIWDTASAGQVPLGAVVGGHTSD--GEILYVGR 105

Query: 169 LEHE 158
             HE
Sbjct: 106 AYHE 109


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -3

Query: 376 NHDTCYRRHPDRTYEYHHHG 317
           N + C ++HP  + + HH+G
Sbjct: 291 NKENCIQQHPS-SQQQHHNG 309


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 22.2 bits (45), Expect = 9.0
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +2

Query: 188 LVNDVHVSMSKNSRQPYCVSKEV 256
           L++D+H     N R  Y VSK+V
Sbjct: 97  LLSDMHRPPENNGRWAYDVSKKV 119


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 480,401
Number of Sequences: 2352
Number of extensions: 10342
Number of successful extensions: 30
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39544623
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)