Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00568X
(459 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein. 129 5e-30
BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4 pr... 129 5e-30
BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4 pr... 129 5e-30
BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4 pr... 129 5e-30
BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4 pr... 129 5e-30
BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4 pr... 129 5e-30
BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4 pr... 129 5e-30
BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4 pr... 129 5e-30
BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4 pr... 129 5e-30
BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4 pr... 129 5e-30
AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4 va... 129 5e-30
AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4 va... 129 5e-30
AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4 pr... 129 5e-30
L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4 prot... 127 2e-29
Z92544-3|CAM26349.1| 438|Homo sapiens rhomboid, veinlet-like 1 ... 30 3.3
Y17108-1|CAA76629.1| 438|Homo sapiens rhomboid-related protein ... 30 3.3
BC120875-1|AAI20876.1| 438|Homo sapiens rhomboid, veinlet-like ... 30 3.3
BC120874-1|AAI20875.1| 438|Homo sapiens rhomboid, veinlet-like ... 30 3.3
AE006464-9|AAK61241.1| 438|Homo sapiens rhomboid related protei... 30 3.3
M76558-1|AAA58402.1| 2161|Homo sapiens calcium channel alpha-1D ... 30 4.4
>D23660-1|BAA04887.1| 427|Homo sapiens ribosomal protein protein.
Length = 427
Score = 129 bits (311), Expect = 5e-30
Identities = 56/62 (90%), Positives = 57/62 (91%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG*RMFAPTKPWRRWHRRVKLR 435
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG RMFAPTK WRRWHRRV
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 436 QR 441
Q+
Sbjct: 119 QK 120
Score = 74.1 bits (174), Expect = 2e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
>BC095427-1|AAH95427.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 129 bits (311), Expect = 5e-30
Identities = 56/62 (90%), Positives = 57/62 (91%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG*RMFAPTKPWRRWHRRVKLR 435
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG RMFAPTK WRRWHRRV
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 436 QR 441
Q+
Sbjct: 119 QK 120
Score = 74.1 bits (174), Expect = 2e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
>BC066925-1|AAH66925.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 129 bits (311), Expect = 5e-30
Identities = 56/62 (90%), Positives = 57/62 (91%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG*RMFAPTKPWRRWHRRVKLR 435
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG RMFAPTK WRRWHRRV
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 436 QR 441
Q+
Sbjct: 119 QK 120
Score = 74.1 bits (174), Expect = 2e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
>BC014653-1|AAH14653.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 129 bits (311), Expect = 5e-30
Identities = 56/62 (90%), Positives = 57/62 (91%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG*RMFAPTKPWRRWHRRVKLR 435
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG RMFAPTK WRRWHRRV
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 436 QR 441
Q+
Sbjct: 119 QK 120
Score = 74.1 bits (174), Expect = 2e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
>BC010151-1|AAH10151.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 129 bits (311), Expect = 5e-30
Identities = 56/62 (90%), Positives = 57/62 (91%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG*RMFAPTKPWRRWHRRVKLR 435
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG RMFAPTK WRRWHRRV
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 436 QR 441
Q+
Sbjct: 119 QK 120
Score = 74.1 bits (174), Expect = 2e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
>BC009888-1|AAH09888.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 129 bits (311), Expect = 5e-30
Identities = 56/62 (90%), Positives = 57/62 (91%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG*RMFAPTKPWRRWHRRVKLR 435
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG RMFAPTK WRRWHRRV
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 436 QR 441
Q+
Sbjct: 119 QK 120
Score = 74.1 bits (174), Expect = 2e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
>BC007996-1|AAH07996.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 129 bits (311), Expect = 5e-30
Identities = 56/62 (90%), Positives = 57/62 (91%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG*RMFAPTKPWRRWHRRVKLR 435
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG RMFAPTK WRRWHRRV
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 436 QR 441
Q+
Sbjct: 119 QK 120
Score = 74.1 bits (174), Expect = 2e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
>BC007748-1|AAH07748.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 129 bits (311), Expect = 5e-30
Identities = 56/62 (90%), Positives = 57/62 (91%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG*RMFAPTKPWRRWHRRVKLR 435
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG RMFAPTK WRRWHRRV
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 436 QR 441
Q+
Sbjct: 119 QK 120
Score = 74.1 bits (174), Expect = 2e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
>BC005817-1|AAH05817.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 129 bits (311), Expect = 5e-30
Identities = 56/62 (90%), Positives = 57/62 (91%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG*RMFAPTKPWRRWHRRVKLR 435
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG RMFAPTK WRRWHRRV
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 436 QR 441
Q+
Sbjct: 119 QK 120
Score = 74.1 bits (174), Expect = 2e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
>BC001365-1|AAH01365.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 129 bits (311), Expect = 5e-30
Identities = 56/62 (90%), Positives = 57/62 (91%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG*RMFAPTKPWRRWHRRVKLR 435
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG RMFAPTK WRRWHRRV
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 436 QR 441
Q+
Sbjct: 119 QK 120
Score = 74.1 bits (174), Expect = 2e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
>AK223057-1|BAD96777.1| 427|Homo sapiens ribosomal protein L4
variant protein.
Length = 427
Score = 129 bits (311), Expect = 5e-30
Identities = 56/62 (90%), Positives = 57/62 (91%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG*RMFAPTKPWRRWHRRVKLR 435
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG RMFAPTK WRRWHRRV
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 436 QR 441
Q+
Sbjct: 119 QK 120
Score = 74.1 bits (174), Expect = 2e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHANLRKNNRQPYAVSE 56
>AB208977-1|BAD92214.1| 441|Homo sapiens ribosomal protein L4
variant protein.
Length = 441
Score = 129 bits (311), Expect = 5e-30
Identities = 56/62 (90%), Positives = 57/62 (91%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG*RMFAPTKPWRRWHRRVKLR 435
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG RMFAPTK WRRWHRRV
Sbjct: 73 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 132
Query: 436 QR 441
Q+
Sbjct: 133 QK 134
Score = 74.5 bits (175), Expect = 2e-13
Identities = 35/58 (60%), Positives = 45/58 (77%)
Frame = +2
Query: 77 SLSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
+++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 14 AMACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 70
>AB061820-1|BAB79458.1| 427|Homo sapiens ribosomal protein L4
protein.
Length = 427
Score = 129 bits (311), Expect = 5e-30
Identities = 56/62 (90%), Positives = 57/62 (91%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG*RMFAPTKPWRRWHRRVKLR 435
GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG RMFAPTK WRRWHRRV
Sbjct: 59 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 436 QR 441
Q+
Sbjct: 119 QK 120
Score = 74.1 bits (174), Expect = 2e-13
Identities = 35/57 (61%), Positives = 44/57 (77%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
++ ARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MACARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDIVNFVHTNLRKNNRQPYAVSE 56
>L20868-1|AAA60281.2| 426|Homo sapiens ribosomal protein L4
protein.
Length = 426
Score = 127 bits (306), Expect = 2e-29
Identities = 55/62 (88%), Positives = 56/62 (90%)
Frame = +1
Query: 256 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG*RMFAPTKPWRRWHRRVKLR 435
GHQT AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG RMFAPTK WRRWHRRV
Sbjct: 59 GHQTRAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTT 118
Query: 436 QR 441
Q+
Sbjct: 119 QK 120
Score = 76.2 bits (179), Expect = 5e-14
Identities = 36/57 (63%), Positives = 45/57 (78%)
Frame = +2
Query: 80 LSVARPLVSVYSEKSETVQGAAKPLPFVFKAPIRPDLVNDVHVSMSKNSRQPYCVSK 250
++VARPL+SVYSEK E+ G LP VFKAPIRPD+VN VH ++ KN+RQPY VS+
Sbjct: 1 MAVARPLISVYSEKGES-SGKNVTLPAVFKAPIRPDMVNFVHTNLRKNNRQPYAVSE 56
>Z92544-3|CAM26349.1| 438|Homo sapiens rhomboid, veinlet-like 1
(Drosophila) protein.
Length = 438
Score = 30.3 bits (65), Expect = 3.3
Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 4/67 (5%)
Frame = +1
Query: 241 REQGGGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG*RMFAPTKP----WR 408
R + GG E W G + P ++ G ++G G C AP++P W
Sbjct: 3 RVEDGGTTEELEDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQPGPALWS 62
Query: 409 RWHRRVK 429
R R +
Sbjct: 63 RGRARTQ 69
>Y17108-1|CAA76629.1| 438|Homo sapiens rhomboid-related protein
protein.
Length = 438
Score = 30.3 bits (65), Expect = 3.3
Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 4/67 (5%)
Frame = +1
Query: 241 REQGGGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG*RMFAPTKP----WR 408
R + GG E W G + P ++ G ++G G C AP++P W
Sbjct: 3 RVEDGGTTEELEDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQPGPALWS 62
Query: 409 RWHRRVK 429
R R +
Sbjct: 63 RGRARTQ 69
>BC120875-1|AAI20876.1| 438|Homo sapiens rhomboid, veinlet-like 1
(Drosophila) protein.
Length = 438
Score = 30.3 bits (65), Expect = 3.3
Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 4/67 (5%)
Frame = +1
Query: 241 REQGGGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG*RMFAPTKP----WR 408
R + GG E W G + P ++ G ++G G C AP++P W
Sbjct: 3 RVEDGGTTEELEDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQPGPALWS 62
Query: 409 RWHRRVK 429
R R +
Sbjct: 63 RGRARTQ 69
>BC120874-1|AAI20875.1| 438|Homo sapiens rhomboid, veinlet-like 1
(Drosophila) protein.
Length = 438
Score = 30.3 bits (65), Expect = 3.3
Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 4/67 (5%)
Frame = +1
Query: 241 REQGGGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG*RMFAPTKP----WR 408
R + GG E W G + P ++ G ++G G C AP++P W
Sbjct: 3 RVEDGGTTEELEDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQPGPALWS 62
Query: 409 RWHRRVK 429
R R +
Sbjct: 63 RGRARTQ 69
>AE006464-9|AAK61241.1| 438|Homo sapiens rhomboid related protein
protein.
Length = 438
Score = 30.3 bits (65), Expect = 3.3
Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 4/67 (5%)
Frame = +1
Query: 241 REQGGGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRG*RMFAPTKP----WR 408
R + GG E W G + P ++ G ++G G C AP++P W
Sbjct: 3 RVEDGGTTEELEDWDPGTSALPAPGIKQGPREQTGTGPLSQKCWEPEPDAPSQPGPALWS 62
Query: 409 RWHRRVK 429
R R +
Sbjct: 63 RGRARTQ 69
>M76558-1|AAA58402.1| 2161|Homo sapiens calcium channel alpha-1D
subunit protein.
Length = 2161
Score = 29.9 bits (64), Expect = 4.4
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +1
Query: 244 EQGGGHQTSAESWGTGRAVA-RIPRVRGGGTHRSGQGAFGNMCRG*RMFAPTKPWRRWHR 420
E+GG S T + V G G +R G G++C+ ++ WRRW+R
Sbjct: 454 EEGGEEGKRNTSMPTSETESVNTENVSGEGENR---GCCGSLCQAISKSKLSRRWRRWNR 510
Query: 421 RVKLRQRTAV 450
+ R R AV
Sbjct: 511 FNRRRCRAAV 520
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,242,605
Number of Sequences: 237096
Number of extensions: 1550798
Number of successful extensions: 3938
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 3618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3878
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3872123864
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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