Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= heS00567
(753 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 55 8e-10
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 22 5.4
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.1
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.1
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.1
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.1
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.1
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 7.1
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 22 7.1
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 7.1
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 7.1
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 22 7.1
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 54.8 bits (126), Expect = 8e-10
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = +2
Query: 290 CCGAVKENHCMIITFSVFLLIIFVAELAVGIAGY--MKHTDLEDSVMRNLNASITQYPVD 463
CCGA++E+HCM ITF+ FLL I + ++AV + + +K+ D ++ Y ++
Sbjct: 70 CCGAIRESHCMTITFASFLLFILLVQIAVAVYAFIVVKNDDNFRNISEKYQEIFNGYFLN 129
Query: 464 KNVQKTIDIIQTDLQ 508
+ ID IQ +LQ
Sbjct: 130 SESKDFIDFIQKNLQ 144
Score = 37.9 bits (84), Expect = 1e-04
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +3
Query: 90 GMSCVKYLMFCFNLLFAITGLIILIVGI 173
GM +KYL+F FN +FA+ GL IL +G+
Sbjct: 4 GMGMIKYLLFIFNFVFAVCGLGILTLGV 31
Score = 32.7 bits (71), Expect = 0.004
Identities = 18/53 (33%), Positives = 31/53 (58%)
Frame = +1
Query: 502 LASCGINSPADWADHGLPIPSTCCSAQEINDGVVAACTENSTNFHSKGCLTKL 660
L CG++S +D+ D PIP++CC++ E N T + +N ++ GC+ L
Sbjct: 143 LQCCGVHSLSDYNDK--PIPASCCNSPENN-------TCSISNSYTNGCVEAL 186
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 22.2 bits (45), Expect = 5.4
Identities = 9/29 (31%), Positives = 17/29 (58%)
Frame = -1
Query: 741 YHTEELNQSDTDSNAGEHHTNVLHVNNQF 655
+H++ L+ SD D + EH +L + + F
Sbjct: 496 FHSQVLSMSDYDISNIEHEALLLVITSTF 524
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.1
Identities = 5/11 (45%), Positives = 10/11 (90%)
Frame = +2
Query: 95 VLCKVPHVLLQ 127
+LC+ PH+++Q
Sbjct: 451 ILCRAPHIIVQ 461
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.1
Identities = 5/11 (45%), Positives = 10/11 (90%)
Frame = +2
Query: 95 VLCKVPHVLLQ 127
+LC+ PH+++Q
Sbjct: 451 ILCRAPHIIVQ 461
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.1
Identities = 5/11 (45%), Positives = 10/11 (90%)
Frame = +2
Query: 95 VLCKVPHVLLQ 127
+LC+ PH+++Q
Sbjct: 451 ILCRAPHIIVQ 461
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.1
Identities = 5/11 (45%), Positives = 10/11 (90%)
Frame = +2
Query: 95 VLCKVPHVLLQ 127
+LC+ PH+++Q
Sbjct: 451 ILCRAPHIIVQ 461
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.1
Identities = 5/11 (45%), Positives = 10/11 (90%)
Frame = +2
Query: 95 VLCKVPHVLLQ 127
+LC+ PH+++Q
Sbjct: 451 ILCRAPHIIVQ 461
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.8 bits (44), Expect = 7.1
Identities = 5/11 (45%), Positives = 10/11 (90%)
Frame = +2
Query: 95 VLCKVPHVLLQ 127
+LC+ PH+++Q
Sbjct: 451 ILCRAPHIIVQ 461
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 21.8 bits (44), Expect = 7.1
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = -2
Query: 47 IVLLRNKMIHTSAN 6
+V+ RNK +HT+ N
Sbjct: 76 VVIARNKSMHTATN 89
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 7.1
Identities = 5/11 (45%), Positives = 10/11 (90%)
Frame = +2
Query: 95 VLCKVPHVLLQ 127
+LC+ PH+++Q
Sbjct: 519 ILCRAPHIIVQ 529
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 7.1
Identities = 5/11 (45%), Positives = 10/11 (90%)
Frame = +2
Query: 95 VLCKVPHVLLQ 127
+LC+ PH+++Q
Sbjct: 519 ILCRAPHIIVQ 529
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 21.8 bits (44), Expect = 7.1
Identities = 7/19 (36%), Positives = 9/19 (47%)
Frame = -3
Query: 718 KRYRLQRRRAPYQCPSCEQ 662
+ YR PYQC C +
Sbjct: 109 RHYRTHTGEKPYQCEYCSK 127
Score = 21.4 bits (43), Expect = 9.4
Identities = 6/16 (37%), Positives = 10/16 (62%)
Frame = -3
Query: 709 RLQRRRAPYQCPSCEQ 662
R+ + PY+C CE+
Sbjct: 140 RIHTKERPYKCDVCER 155
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,621
Number of Sequences: 438
Number of extensions: 4157
Number of successful extensions: 17
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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