Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= heS00566
         (635 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory recept...    27   0.13 
AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory recept...    27   0.13 
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   8.6  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    21   8.6  

>AM292366-1|CAL23178.2|  379|Tribolium castaneum gustatory receptor
           candidate 45 protein.
          Length = 379

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = +3

Query: 147 NFFRNKLKLMSFLRKRCNVNPARGPFHFRAP--SKILWR 257
           N+ +  ++ +SF  K CN+     P+ F  P   K LW+
Sbjct: 5   NYSKKDIRSLSFFYKICNIFGIVPPYSFEKPDSQKSLWK 43


>AM292329-1|CAL23141.2|  379|Tribolium castaneum gustatory receptor
           candidate 8 protein.
          Length = 379

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = +3

Query: 147 NFFRNKLKLMSFLRKRCNVNPARGPFHFRAP--SKILWR 257
           N+ +  ++ +SF  K CN+     P+ F  P   K LW+
Sbjct: 5   NYSKKDIRSLSFFYKICNIFGIVPPYSFEKPDSQKSLWK 43


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -1

Query: 56  QMTTAIDHYGLIAK 15
           Q+ +A+D YGL+A+
Sbjct: 137 QLFSAVDPYGLVAQ 150


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 473 KLEDKRKGKAVKE 511
           K EDK+K K +KE
Sbjct: 259 KKEDKKKKKTIKE 271


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,439
Number of Sequences: 336
Number of extensions: 3334
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)